RNA–Protein interactions for RNA: ENST00000255448.8

DCLK1-201, Transcript of doublecortin like kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DCLK1, Length 5,703 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCLK1-201ENST00000255448 ADAMTS12P58397 1594 aa12.44□□□□□ -0.42
DCLK1-201ENST00000255448 FRMD3A2A2Y4 597 aa12.44□□□□□ -0.42
DCLK1-201ENST00000255448 SYKP43405 635 aa12.44□□□□□ -0.42
DCLK1-201ENST00000255448 ARHGAP45Q92619 1136 aa12.44□□□□□ -0.42
DCLK1-201ENST00000255448 PHAXQ9H814 394 aaKnown RBP12.44□□□□□ -0.42
DCLK1-201ENST00000255448 ZNF444Q8N0Y2 327 aaPredicted RBP12.43□□□□□ -0.42
DCLK1-201ENST00000255448 CCDC8Q9H0W5 538 aaPredicted RBP12.43□□□□□ -0.42
DCLK1-201ENST00000255448 HPDP32754 393 aaPredicted RBP12.43□□□□□ -0.42
DCLK1-201ENST00000255448 CHRNA2Q15822 529 aa12.43□□□□□ -0.42
DCLK1-201ENST00000255448 DDX46Q7L014 1031 aaKnown RBP12.43□□□□□ -0.42
DCLK1-201ENST00000255448 VPS36Q86VN1 386 aa12.43□□□□□ -0.42
DCLK1-201ENST00000255448 ZCRB1Q8TBF4 217 aaKnown RBP12.43□□□□□ -0.42
DCLK1-201ENST00000255448 CTNNBL1Q8WYA6 563 aaPredicted RBP12.43□□□□□ -0.42
DCLK1-201ENST00000255448 SPATS2LQ9NUQ6 558 aaKnown RBP12.43□□□□□ -0.42
DCLK1-201ENST00000255448 TMEM63CQ9P1W3 806 aa12.43□□□□□ -0.42
DCLK1-201ENST00000255448 ZNF213O14771 459 aa12.43□□□□□ -0.42
DCLK1-201ENST00000255448 GPTP24298 496 aa12.43□□□□□ -0.42
DCLK1-201ENST00000255448 ZNF75DP51815 510 aa12.43□□□□□ -0.42
DCLK1-201ENST00000255448 VAV2P52735 878 aa12.43□□□□□ -0.42
DCLK1-201ENST00000255448 LDHAL6AQ6ZMR3 332 aa12.43□□□□□ -0.42
DCLK1-201ENST00000255448 MRPS27Q92552 414 aaKnown RBP12.43□□□□□ -0.42
DCLK1-201ENST00000255448 BAIAP2L1Q9UHR4 511 aa12.43□□□□□ -0.42
DCLK1-201ENST00000255448 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.43□□□□□ -0.42
DCLK1-201ENST00000255448 ASXL1Q8IXJ9 1541 aa12.43□□□□□ -0.42
DCLK1-201ENST00000255448 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.43□□□□□ -0.42
DCLK1-201ENST00000255448 TRAPPC8Q9Y2L5 1435 aa12.43□□□□□ -0.42
DCLK1-201ENST00000255448 CYLC1P35663 651 aaPredicted RBP12.42□□□□□ -0.42
DCLK1-201ENST00000255448 RBBP5Q15291 538 aaKnown RBP12.42□□□□□ -0.42
DCLK1-201ENST00000255448 CEP85LQ5SZL2 805 aa12.42□□□□□ -0.42
DCLK1-201ENST00000255448 KIAA0556O60303 1618 aa12.42□□□□□ -0.42
DCLK1-201ENST00000255448 ATP11AP98196 1134 aa12.42□□□□□ -0.42
DCLK1-201ENST00000255448 PPFIBP2Q8ND30 876 aa12.42□□□□□ -0.42
DCLK1-201ENST00000255448 USP16Q9Y5T5 823 aa12.42□□□□□ -0.42
DCLK1-201ENST00000255448 VEZTQ9HBM0 779 aa12.42□□□□□ -0.42
DCLK1-201ENST00000255448 ABCC2Q92887 1545 aa12.42□□□□□ -0.42
DCLK1-201ENST00000255448 A0A1W2PRG0 241 aa12.42□□□□□ -0.42
DCLK1-201ENST00000255448 STAMBPO95630 424 aa12.42□□□□□ -0.42
DCLK1-201ENST00000255448 SPTY2D1Q68D10 685 aaPredicted RBP12.42□□□□□ -0.42
DCLK1-201ENST00000255448 PI4KAP2A4QPH2 592 aa12.42□□□□□ -0.42
DCLK1-201ENST00000255448 RNF168Q8IYW5 571 aaPredicted RBP12.42□□□□□ -0.42
DCLK1-201ENST00000255448 PI4KAP1Q8N8J0 262 aa12.42□□□□□ -0.42
DCLK1-201ENST00000255448 LUC7L2Q9Y383 392 aaKnown RBP12.42□□□□□ -0.42
DCLK1-201ENST00000255448 TRIM21P19474 475 aaKnown RBP12.41□□□□□ -0.42
DCLK1-201ENST00000255448 MXRA7P84157 204 aa12.41□□□□□ -0.42
DCLK1-201ENST00000255448 STIM2Q9P246 746 aa12.41□□□□□ -0.42
DCLK1-201ENST00000255448 EIF2AK4Q9P2K8 1649 aaKnown RBP12.41□□□□□ -0.42
DCLK1-201ENST00000255448 RFC4P35249 363 aa12.41□□□□□ -0.42
DCLK1-201ENST00000255448 UBE3BQ7Z3V4 1068 aa12.41□□□□□ -0.42
DCLK1-201ENST00000255448 BAG1Q99933 345 aaPredicted RBP12.41□□□□□ -0.42
DCLK1-201ENST00000255448 PRAG1Q86YV5 1406 aa12.41□□□□□ -0.42
DCLK1-201ENST00000255448 TLDC2A0PJX2 215 aa12.41□□□□□ -0.42
DCLK1-201ENST00000255448 TACC1O75410 805 aa12.41□□□□□ -0.42
DCLK1-201ENST00000255448 UQCRFS1P1P0C7P4 283 aa12.41□□□□□ -0.42
DCLK1-201ENST00000255448 ANKRD13DQ6ZTN6 518 aa12.41□□□□□ -0.42
DCLK1-201ENST00000255448 FAM114A1Q8IWE2 563 aa12.41□□□□□ -0.42
DCLK1-201ENST00000255448 CABS1Q96KC9 395 aa12.41□□□□□ -0.42
DCLK1-201ENST00000255448 SHANK2Q9UPX8 1470 aa12.41□□□□□ -0.42
DCLK1-201ENST00000255448 SMIM23A6NLE4 172 aa12.41□□□□□ -0.42
DCLK1-201ENST00000255448 C6orf229H3BNL8 230 aa12.41□□□□□ -0.42
DCLK1-201ENST00000255448 HNRNPH2P55795 449 aaKnown RBP12.41□□□□□ -0.42
DCLK1-201ENST00000255448 RAB34Q9BZG1 259 aa12.41□□□□□ -0.42
DCLK1-201ENST00000255448 SLC12A7Q9Y666 1083 aa12.41□□□□□ -0.42
DCLK1-201ENST00000255448 CTTNBP2Q8WZ74 1663 aa12.41□□□□□ -0.42
DCLK1-201ENST00000255448 ANAPC15P60006 121 aa12.4□□□□□ -0.42
DCLK1-201ENST00000255448 AKAP4Q5JQC9 854 aa12.4□□□□□ -0.42
DCLK1-201ENST00000255448 CCDC82Q8N4S0 544 aa12.4□□□□□ -0.42
DCLK1-201ENST00000255448 TCEANC2Q96MN5 208 aa12.4□□□□□ -0.42
DCLK1-201ENST00000255448 MACROD2A1Z1Q3 448 aa12.4□□□□□ -0.42
DCLK1-201ENST00000255448 BAG3O95817 575 aa12.4□□□□□ -0.42
DCLK1-201ENST00000255448 PPARDQ03181 441 aa12.4□□□□□ -0.42
DCLK1-201ENST00000255448 KIAA0753Q2KHM9 967 aa12.4□□□□□ -0.42
DCLK1-201ENST00000255448 NAP1L3Q99457 506 aaPredicted RBP12.4□□□□□ -0.42
DCLK1-201ENST00000255448 RANBP6O60518 1105 aaKnown RBP12.4□□□□□ -0.42
DCLK1-201ENST00000255448 WHAMMP3Q1A5X7 153 aa12.4□□□□□ -0.42
DCLK1-201ENST00000255448 FAM114A2Q9NRY5 505 aa12.4□□□□□ -0.42
DCLK1-201ENST00000255448 TBX22Q9Y458 520 aa12.4□□□□□ -0.42
DCLK1-201ENST00000255448 KRT86O43790 486 aa12.4□□□□□ -0.42
DCLK1-201ENST00000255448 RLBP1P12271 317 aa12.4□□□□□ -0.42
DCLK1-201ENST00000255448 CCDC152Q4G0S7 254 aa12.4□□□□□ -0.42
DCLK1-201ENST00000255448 CTAGE1Q96RT6 745 aa12.4□□□□□ -0.42
DCLK1-201ENST00000255448 CBX8Q9HC52 389 aa12.4□□□□□ -0.42
DCLK1-201ENST00000255448 FLT4P35916 1363 aa12.4□□□□□ -0.42
DCLK1-201ENST00000255448 ICE2Q659A1 982 aa12.4□□□□□ -0.43
DCLK1-201ENST00000255448 ESYT1Q9BSJ8 1104 aa12.4□□□□□ -0.43
DCLK1-201ENST00000255448 TCOF1Q13428 1488 aaKnown RBP12.39□□□□□ -0.43
DCLK1-201ENST00000255448 PPP1R12BO60237 982 aaPredicted RBP12.39□□□□□ -0.43
DCLK1-201ENST00000255448 ALDH1L1O75891 902 aa12.39□□□□□ -0.43
DCLK1-201ENST00000255448 PAF1Q8N7H5 531 aa12.39□□□□□ -0.43
DCLK1-201ENST00000255448 INTS4Q96HW7 963 aaKnown RBP12.39□□□□□ -0.43
DCLK1-201ENST00000255448 TACO1Q9BSH4 297 aaKnown RBP12.39□□□□□ -0.43
DCLK1-201ENST00000255448 GOLGA8BA8MQT2 603 aa12.39□□□□□ -0.43
DCLK1-201ENST00000255448 GADD45BO75293 160 aaPredicted RBP12.39□□□□□ -0.43
DCLK1-201ENST00000255448 CETN2P41208 172 aa12.39□□□□□ -0.43
DCLK1-201ENST00000255448 ST5P78524 1137 aa12.39□□□□□ -0.43
DCLK1-201ENST00000255448 IFT74Q96LB3 600 aa12.39□□□□□ -0.43
DCLK1-201ENST00000255448 ZMYM3Q14202 1370 aa12.39□□□□□ -0.43
DCLK1-201ENST00000255448 VIMP08670 466 aaKnown RBP12.39□□□□□ -0.43
DCLK1-201ENST00000255448 ZBTB16Q05516 673 aa12.39□□□□□ -0.43
DCLK1-201ENST00000255448 EHMT1Q9H9B1 1298 aa12.39□□□□□ -0.43
DCLK1-201ENST00000255448 TNNQ9UQP3 1299 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms