RNA–Protein interactions for RNA: ENST00000254181.8

USP29-201, Transcript of ubiquitin specific peptidase 29, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP29, Length 3,705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP29-201ENST00000254181 XBP1P17861 261 aa8.74□□□□□ -1.01
USP29-201ENST00000254181 HDLBPQ00341 1268 aaKnown RBP8.74□□□□□ -1.01
USP29-201ENST00000254181 C10orf62Q5T681 223 aaPredicted RBP8.74□□□□□ -1.01
USP29-201ENST00000254181 CDC37L1Q7L3B6 337 aa8.74□□□□□ -1.01
USP29-201ENST00000254181 TMC6Q7Z403 805 aa8.74□□□□□ -1.01
USP29-201ENST00000254181 RNF168Q8IYW5 571 aaPredicted RBP8.74□□□□□ -1.01
USP29-201ENST00000254181 PPP2R1AP30153 589 aa8.74□□□□□ -1.01
USP29-201ENST00000254181 JADE2Q9NQC1 790 aa8.74□□□□□ -1.01
USP29-201ENST00000254181 SOS1Q07889 1333 aaPredicted RBP8.74□□□□□ -1.01
USP29-201ENST00000254181 KIF5CO60282 957 aa8.74□□□□□ -1.01
USP29-201ENST00000254181 SMIM24O75264 130 aa8.74□□□□□ -1.01
USP29-201ENST00000254181 RHOXF2BP0C7M4 288 aa8.74□□□□□ -1.01
USP29-201ENST00000254181 ZC3H6P61129 1189 aaKnown RBP8.74□□□□□ -1.01
USP29-201ENST00000254181 TMF1P82094 1093 aa8.74□□□□□ -1.01
USP29-201ENST00000254181 CCDC15Q0P6D6 951 aa8.74□□□□□ -1.01
USP29-201ENST00000254181 CCDC144BQ3MJ40 725 aa8.74□□□□□ -1.01
USP29-201ENST00000254181 LARP1BQ659C4 914 aaKnown RBP8.74□□□□□ -1.01
USP29-201ENST00000254181 TRIM42Q8IWZ5 723 aa8.74□□□□□ -1.01
USP29-201ENST00000254181 CCDC144CPQ8IYA2 1237 aa8.74□□□□□ -1.01
USP29-201ENST00000254181 BICD1Q96G01 975 aa8.74□□□□□ -1.01
USP29-201ENST00000254181 RHOXF2Q9BQY4 288 aa8.74□□□□□ -1.01
USP29-201ENST00000254181 IQCGQ9H095 443 aaKnown RBP8.74□□□□□ -1.01
USP29-201ENST00000254181 MIS18AQ9NYP9 233 aa8.74□□□□□ -1.01
USP29-201ENST00000254181 ZNF232Q9UNY5 417 aa8.74□□□□□ -1.01
USP29-201ENST00000254181 WIZO95785 1651 aa8.73□□□□□ -1.01
USP29-201ENST00000254181 C21orf2O43822 256 aa8.73□□□□□ -1.01
USP29-201ENST00000254181 CD151P48509 253 aa8.73□□□□□ -1.01
USP29-201ENST00000254181 KCNB1Q14721 858 aa8.73□□□□□ -1.01
USP29-201ENST00000254181 SLC30A9Q6PML9 568 aa8.73□□□□□ -1.01
USP29-201ENST00000254181 TXNDC2Q86VQ3 553 aa8.73□□□□□ -1.01
USP29-201ENST00000254181 TBC1D31Q96DN5 1066 aa8.73□□□□□ -1.01
USP29-201ENST00000254181 CWC25Q9NXE8 425 aaPredicted RBP8.73□□□□□ -1.01
USP29-201ENST00000254181 RTEL1-TNFRSF6BF6WH68 1400 aa8.73□□□□□ -1.01
USP29-201ENST00000254181 AQRO60306 1485 aaKnown RBP eCLIP8.73□□□□□ -1.01
USP29-201ENST00000254181 AKAP17AQ02040 695 aaKnown RBP8.73□□□□□ -1.01
USP29-201ENST00000254181 B4GALNT4Q76KP1 1039 aa8.73□□□□□ -1.01
USP29-201ENST00000254181 FAM76AQ8TAV0 307 aa8.73□□□□□ -1.01
USP29-201ENST00000254181 FAM71BQ8TC56 605 aa8.73□□□□□ -1.01
USP29-201ENST00000254181 MIPOL1Q8TD10 442 aa8.73□□□□□ -1.01
USP29-201ENST00000254181 ZKSCAN4Q969J2 545 aaPredicted RBP8.73□□□□□ -1.01
USP29-201ENST00000254181 SRCIN1Q9C0H9 1055 aa8.73□□□□□ -1.01
USP29-201ENST00000254181 HFM1A2PYH4 1435 aa8.73□□□□□ -1.01
USP29-201ENST00000254181 LDHCP07864 332 aa8.72□□□□□ -1.01
USP29-201ENST00000254181 HSPA4P34932 840 aa8.72□□□□□ -1.01
USP29-201ENST00000254181 ARHGAP25P42331 645 aa8.72□□□□□ -1.01
USP29-201ENST00000254181 ETF1P62495 437 aaKnown RBP8.72□□□□□ -1.01
USP29-201ENST00000254181 NUCB1Q02818 461 aa8.72□□□□□ -1.01
USP29-201ENST00000254181 THEMIS2Q5TEJ8 643 aa8.72□□□□□ -1.01
USP29-201ENST00000254181 CLASRPQ8N2M8 674 aaKnown RBP8.72□□□□□ -1.01
USP29-201ENST00000254181 DUSP9Q99956 384 aaKnown RBP8.72□□□□□ -1.01
USP29-201ENST00000254181 MCM8Q9UJA3 840 aa8.72□□□□□ -1.01
USP29-201ENST00000254181 ITM2BQ9Y287 266 aa8.72□□□□□ -1.01
USP29-201ENST00000254181 KIF21AQ7Z4S6 1674 aa8.72□□□□□ -1.01
USP29-201ENST00000254181 SYNRGQ9UMZ2 1314 aa8.72□□□□□ -1.01
USP29-201ENST00000254181 SGSM2O43147 1006 aa8.72□□□□□ -1.01
USP29-201ENST00000254181 ZEB2O60315 1214 aa8.72□□□□□ -1.01
USP29-201ENST00000254181 TGFB3P10600 412 aa8.72□□□□□ -1.01
USP29-201ENST00000254181 ZCCHC8Q6NZY4 707 aaKnown RBP8.72□□□□□ -1.01
USP29-201ENST00000254181 DZIP1Q86YF9 867 aaKnown RBP8.72□□□□□ -1.01
USP29-201ENST00000254181 DDX27Q96GQ7 796 aaKnown RBP8.72□□□□□ -1.01
USP29-201ENST00000254181 USP26Q9BXU7 913 aa8.72□□□□□ -1.01
USP29-201ENST00000254181 HOOK1Q9UJC3 728 aaKnown RBP8.72□□□□□ -1.01
USP29-201ENST00000254181 AKAP2Q9Y2D5 859 aa8.72□□□□□ -1.01
USP29-201ENST00000254181 ZSCAN12O43309 604 aa8.72□□□□□ -1.01
USP29-201ENST00000254181 N4BP1O75113 896 aaKnown RBP8.72□□□□□ -1.01
USP29-201ENST00000254181 ZNF394Q53GI3 561 aa8.72□□□□□ -1.01
USP29-201ENST00000254181 ACBD5Q5T8D3 534 aaPredicted RBP8.72□□□□□ -1.01
USP29-201ENST00000254181 KCNB2Q92953 911 aa8.72□□□□□ -1.01
USP29-201ENST00000254181 TSC22D3Q99576 134 aa8.72□□□□□ -1.01
USP29-201ENST00000254181 CENPOQ9BU64 300 aa8.72□□□□□ -1.01
USP29-201ENST00000254181 TEX13AQ9BXU3 409 aaPredicted RBP8.72□□□□□ -1.01
USP29-201ENST00000254181 BAIAP2L1Q9UHR4 511 aa8.72□□□□□ -1.01
USP29-201ENST00000254181 STAG3Q9UJ98 1225 aa8.72□□□□□ -1.01
USP29-201ENST00000254181 PARD3Q8TEW0 1356 aa8.72□□□□□ -1.01
USP29-201ENST00000254181 POTEB2H3BUK9 544 aa8.71□□□□□ -1.01
USP29-201ENST00000254181 KIF3BO15066 747 aa8.71□□□□□ -1.01
USP29-201ENST00000254181 FCHSD2O94868 740 aa8.71□□□□□ -1.01
USP29-201ENST00000254181 CD53P19397 219 aa8.71□□□□□ -1.01
USP29-201ENST00000254181 BRD3Q15059 726 aa8.71□□□□□ -1.01
USP29-201ENST00000254181 FERMT3Q86UX7 667 aa8.71□□□□□ -1.01
USP29-201ENST00000254181 CCDC12Q8WUD4 166 aaPredicted RBP8.71□□□□□ -1.01
USP29-201ENST00000254181 SPOCK2Q92563 424 aa8.71□□□□□ -1.01
USP29-201ENST00000254181 PPP1R13BQ96KQ4 1090 aa8.71□□□□□ -1.01
USP29-201ENST00000254181 NAP1L4Q99733 375 aaKnown RBP8.71□□□□□ -1.01
USP29-201ENST00000254181 KLC4Q9NSK0 619 aa8.71□□□□□ -1.01
USP29-201ENST00000254181 BAZ1AQ9NRL2 1556 aaPredicted RBP8.71□□□□□ -1.01
USP29-201ENST00000254181 TUBB4AP04350 444 aa8.71□□□□□ -1.01
USP29-201ENST00000254181 KRT85P78386 507 aa8.71□□□□□ -1.01
USP29-201ENST00000254181 CCDC50Q8IVM0 306 aa8.71□□□□□ -1.01
USP29-201ENST00000254181 PLSCR2Q9NRY7 297 aa8.71□□□□□ -1.01
USP29-201ENST00000254181 DACT1Q9NYF0 836 aa8.71□□□□□ -1.01
USP29-201ENST00000254181 RNF40O75150 1001 aa8.71□□□□□ -1.02
USP29-201ENST00000254181 DNM1Q05193 864 aaKnown RBP8.71□□□□□ -1.02
USP29-201ENST00000254181 AKNAD1Q5T1N1 836 aa8.71□□□□□ -1.02
USP29-201ENST00000254181 KANK3Q6NY19 840 aa8.71□□□□□ -1.02
USP29-201ENST00000254181 TSGA10Q9BZW7 698 aa8.71□□□□□ -1.02
USP29-201ENST00000254181 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.7□□□□□ -1.02
USP29-201ENST00000254181 CCDC151A5D8V7 595 aa8.7□□□□□ -1.02
USP29-201ENST00000254181 TRIM64CA6NLI5 447 aa8.7□□□□□ -1.02
USP29-201ENST00000254181 VDRP11473 427 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms