RNA–Protein interactions for RNA: ENST00000253925.11

PPFIA1-201, Transcript of PTPRF interacting protein alpha 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPFIA1, Length 5,234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-201ENST00000253925 FAM160A1Q05DH4 1040 aa22.11■■□□□ 1.13
PPFIA1-201ENST00000253925 SPA17Q15506 151 aa22.11■■□□□ 1.13
PPFIA1-201ENST00000253925 MADDQ8WXG6 1647 aa22.1■■□□□ 1.13
PPFIA1-201ENST00000253925 PTCH1Q13635 1447 aa22.1■■□□□ 1.13
PPFIA1-201ENST00000253925 GNG11P61952 73 aa22.1■■□□□ 1.13
PPFIA1-201ENST00000253925 CLSTN2Q9H4D0 955 aa22.1■■□□□ 1.13
PPFIA1-201ENST00000253925 ZNF444Q8N0Y2 327 aaPredicted RBP22.1■■□□□ 1.13
PPFIA1-201ENST00000253925 KLHDC4Q8TBB5 520 aa22.1■■□□□ 1.13
PPFIA1-201ENST00000253925 EYA2O00167 538 aa22.09■■□□□ 1.13
PPFIA1-201ENST00000253925 FAM173BQ6P4H8 233 aa22.09■■□□□ 1.13
PPFIA1-201ENST00000253925 METP08581 1390 aa22.09■■□□□ 1.13
PPFIA1-201ENST00000253925 CDK12Q9NYV4 1490 aaPredicted RBP22.09■■□□□ 1.13
PPFIA1-201ENST00000253925 GCKRQ14397 625 aa22.09■■□□□ 1.13
PPFIA1-201ENST00000253925 ESR2Q92731 530 aa22.09■■□□□ 1.13
PPFIA1-201ENST00000253925 RGS12O14924 1447 aa22.09■■□□□ 1.13
PPFIA1-201ENST00000253925 LEO1Q8WVC0 666 aaPredicted RBP22.08■■□□□ 1.13
PPFIA1-201ENST00000253925 POTEB2H3BUK9 544 aa22.08■■□□□ 1.13
PPFIA1-201ENST00000253925 LMOD1P29536 600 aaPredicted RBP22.08■■□□□ 1.13
PPFIA1-201ENST00000253925 GTF2F1P35269 517 aaKnown RBP eCLIP22.08■■□□□ 1.132e-7■■■■■ 34.3
PPFIA1-201ENST00000253925 MAP9Q49MG5 647 aa22.08■■□□□ 1.13
PPFIA1-201ENST00000253925 CCDC152Q4G0S7 254 aa22.08■■□□□ 1.13
PPFIA1-201ENST00000253925 KBTBD3Q8NAB2 608 aa22.08■■□□□ 1.13
PPFIA1-201ENST00000253925 LAMC1P11047 1609 aa22.08■■□□□ 1.13
PPFIA1-201ENST00000253925 GOLGA6L10A6NI86 522 aa22.08■■□□□ 1.12
PPFIA1-201ENST00000253925 MCM3P25205 808 aa22.08■■□□□ 1.12
PPFIA1-201ENST00000253925 CCDC129Q6ZRS4 1044 aa22.08■■□□□ 1.12
PPFIA1-201ENST00000253925 TIMM10P62072 90 aa22.07■■□□□ 1.12
PPFIA1-201ENST00000253925 CRACR2AQ9BSW2 395 aa22.07■■□□□ 1.12
PPFIA1-201ENST00000253925 RAB34Q9BZG1 259 aa22.07■■□□□ 1.12
PPFIA1-201ENST00000253925 SPHKAPQ2M3C7 1700 aa22.07■■□□□ 1.12
PPFIA1-201ENST00000253925 SLU7O95391 586 aaKnown RBP22.07■■□□□ 1.12
PPFIA1-201ENST00000253925 PDE4BQ07343 736 aa22.07■■□□□ 1.12
PPFIA1-201ENST00000253925 CCDC191Q8NCU4 936 aa22.07■■□□□ 1.12
PPFIA1-201ENST00000253925 TIGD1Q96MW7 591 aa22.07■■□□□ 1.12
PPFIA1-201ENST00000253925 BEND3Q5T5X7 828 aa22.06■■□□□ 1.12
PPFIA1-201ENST00000253925 GPT2Q8TD30 523 aa22.06■■□□□ 1.12
PPFIA1-201ENST00000253925 SLC4A4Q9Y6R1 1079 aa22.06■■□□□ 1.12
PPFIA1-201ENST00000253925 POLR3GO15318 223 aaPredicted RBP22.06■■□□□ 1.12
PPFIA1-201ENST00000253925 DNAI1Q9UI46 699 aa22.06■■□□□ 1.12
PPFIA1-201ENST00000253925 HECW2Q9P2P5 1572 aa22.06■■□□□ 1.12
PPFIA1-201ENST00000253925 ABCC3O15438 1527 aa22.06■■□□□ 1.12
PPFIA1-201ENST00000253925 KIAA0754O94854 1291 aa22.06■■□□□ 1.12
PPFIA1-201ENST00000253925 FGFR1OPO95684 399 aaKnown RBP22.06■■□□□ 1.12
PPFIA1-201ENST00000253925 USP8P40818 1118 aa22.06■■□□□ 1.12
PPFIA1-201ENST00000253925 SLC52A2Q9HAB3 445 aa22.06■■□□□ 1.12
PPFIA1-201ENST00000253925 A0A1B0GUL7 405 aa22.06■■□□□ 1.12
PPFIA1-201ENST00000253925 ZPR1O75312 459 aa22.06■■□□□ 1.12
PPFIA1-201ENST00000253925 KRT222Q8N1A0 295 aa22.06■■□□□ 1.12
PPFIA1-201ENST00000253925 CHD1O14646 1710 aa22.06■■□□□ 1.12
PPFIA1-201ENST00000253925 UBA7P41226 1012 aa22.05■■□□□ 1.12
PPFIA1-201ENST00000253925 CCDC94Q9BW85 323 aaPredicted RBP22.05■■□□□ 1.12
PPFIA1-201ENST00000253925 TSPY2A6NKD2 308 aa22.05■■□□□ 1.12
PPFIA1-201ENST00000253925 ERLIN2O94905 339 aa22.05■■□□□ 1.12
PPFIA1-201ENST00000253925 IL2RBP14784 551 aa22.05■■□□□ 1.12
PPFIA1-201ENST00000253925 LTKP29376 864 aa22.05■■□□□ 1.12
PPFIA1-201ENST00000253925 SYCP1Q15431 976 aa22.05■■□□□ 1.12
PPFIA1-201ENST00000253925 CABLES1Q8TDN4 633 aa22.05■■□□□ 1.12
PPFIA1-201ENST00000253925 CTAGE1Q96RT6 745 aa22.05■■□□□ 1.12
PPFIA1-201ENST00000253925 CDC37L1Q7L3B6 337 aa22.05■■□□□ 1.12
PPFIA1-201ENST00000253925 IGSF1Q8N6C5 1336 aa22.05■■□□□ 1.12
PPFIA1-201ENST00000253925 ME3Q16798 604 aa22.05■■□□□ 1.12
PPFIA1-201ENST00000253925 CCDC12Q8WUD4 166 aaPredicted RBP22.05■■□□□ 1.12
PPFIA1-201ENST00000253925 TCP11L1Q9NUJ3 509 aa22.05■■□□□ 1.12
PPFIA1-201ENST00000253925 GIGYF1O75420 1035 aaPredicted RBP22.04■■□□□ 1.12
PPFIA1-201ENST00000253925 ATP5JP18859 108 aa22.04■■□□□ 1.12
PPFIA1-201ENST00000253925 CYP7A1P22680 504 aa22.04■■□□□ 1.12
PPFIA1-201ENST00000253925 SRRTQ9BXP5 876 aaKnown RBP22.04■■□□□ 1.12
PPFIA1-201ENST00000253925 N4BP3O15049 544 aa22.04■■□□□ 1.12
PPFIA1-201ENST00000253925 GNAT2P19087 354 aa22.04■■□□□ 1.12
PPFIA1-201ENST00000253925 IFNKQ9P0W0 207 aa22.04■■□□□ 1.12
PPFIA1-201ENST00000253925 SPAG1Q07617 926 aa22.04■■□□□ 1.12
PPFIA1-201ENST00000253925 ZSWIM6Q9HCJ5 1215 aa22.04■■□□□ 1.12
PPFIA1-201ENST00000253925 POLR1AO95602 1720 aaPredicted RBP22.04■■□□□ 1.12
PPFIA1-201ENST00000253925 CBX8Q9HC52 389 aa22.03■■□□□ 1.12
PPFIA1-201ENST00000253925 ZNF500O60304 480 aaPredicted RBP22.03■■□□□ 1.12
PPFIA1-201ENST00000253925 NAA16Q6N069 864 aaPredicted RBP22.03■■□□□ 1.12
PPFIA1-201ENST00000253925 GTPBP4Q9BZE4 634 aaKnown RBP22.03■■□□□ 1.12
PPFIA1-201ENST00000253925 A0A1B0GVL5 298 aa22.03■■□□□ 1.12
PPFIA1-201ENST00000253925 TSG101Q99816 390 aa22.03■■□□□ 1.12
PPFIA1-201ENST00000253925 RMND1Q9NWS8 449 aa22.03■■□□□ 1.12
PPFIA1-201ENST00000253925 USO1O60763 962 aaKnown RBP22.03■■□□□ 1.12
PPFIA1-201ENST00000253925 KDRP35968 1356 aa22.03■■□□□ 1.12
PPFIA1-201ENST00000253925 CPSF1Q10570 1443 aaKnown RBP22.03■■□□□ 1.12
PPFIA1-201ENST00000253925 TMEM266Q2M3C6 531 aa22.03■■□□□ 1.12
PPFIA1-201ENST00000253925 ODF2Q5BJF6 829 aa22.03■■□□□ 1.12
PPFIA1-201ENST00000253925 KAT14Q9H8E8 782 aa22.03■■□□□ 1.12
PPFIA1-201ENST00000253925 CDC42BPBQ9Y5S2 1711 aa22.03■■□□□ 1.12
PPFIA1-201ENST00000253925 FAM193AP78312 1265 aa22.03■■□□□ 1.12
PPFIA1-201ENST00000253925 CUL4AQ13619 759 aa22.03■■□□□ 1.12
PPFIA1-201ENST00000253925 TAF4BQ92750 862 aa22.03■■□□□ 1.12
PPFIA1-201ENST00000253925 TMX1Q9H3N1 280 aa22.03■■□□□ 1.12
PPFIA1-201ENST00000253925 ANKIB1Q9P2G1 1089 aa22.03■■□□□ 1.12
PPFIA1-201ENST00000253925 PCDH11XQ9BZA7 1347 aa22.02■■□□□ 1.12
PPFIA1-201ENST00000253925 PCDH11YQ9BZA8 1340 aa22.02■■□□□ 1.12
PPFIA1-201ENST00000253925 TRIM75PA6NK02 468 aa22.02■■□□□ 1.12
PPFIA1-201ENST00000253925 RNF17Q9BXT8 1623 aaKnown RBP22.02■■□□□ 1.12
PPFIA1-201ENST00000253925 PTH1RQ03431 593 aa22.02■■□□□ 1.12
PPFIA1-201ENST00000253925 CRNKL1Q9BZJ0 848 aaKnown RBP22.02■■□□□ 1.12
PPFIA1-201ENST00000253925 AMPD3Q01432 767 aa22.02■■□□□ 1.12
PPFIA1-201ENST00000253925 IFIT1BQ5T764 474 aaKnown RBP22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms