RNA–Protein interactions for RNA: ENST00000249007.4

RFPL3-201, Transcript of ret finger protein like 3, humanhuman

TSL 1 (best) BASIC

Gene RFPL3, Length 1,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL3-201ENST00000249007 UNC80Q8N2C7 3258 aa15.72■□□□□ 0.11
RFPL3-201ENST00000249007 ZBTB48P10074 688 aaPredicted RBP15.71■□□□□ 0.11
RFPL3-201ENST00000249007 CRHR2Q13324 411 aa15.71■□□□□ 0.11
RFPL3-201ENST00000249007 SLC9C1Q4G0N8 1177 aa15.71■□□□□ 0.11
RFPL3-201ENST00000249007 NBPF11Q86T75 865 aa15.71■□□□□ 0.11
RFPL3-201ENST00000249007 SLC10A4Q96EP9 437 aa15.71■□□□□ 0.11
RFPL3-201ENST00000249007 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.71■□□□□ 0.11
RFPL3-201ENST00000249007 TSPYL4Q9UJ04 414 aa15.71■□□□□ 0.11
RFPL3-201ENST00000249007 SP3Q02447 781 aa15.71■□□□□ 0.1
RFPL3-201ENST00000249007 RTL5Q5HYW3 569 aaPredicted RBP15.71■□□□□ 0.1
RFPL3-201ENST00000249007 PODNQ7Z5L7 613 aa15.71■□□□□ 0.1
RFPL3-201ENST00000249007 SASH1O94885 1247 aa15.7■□□□□ 0.1
RFPL3-201ENST00000249007 OTUD7BQ6GQQ9 843 aa15.7■□□□□ 0.1
RFPL3-201ENST00000249007 FZD1Q9UP38 647 aa15.7■□□□□ 0.1
RFPL3-201ENST00000249007 CLSPNQ9HAW4 1339 aa15.7■□□□□ 0.1
RFPL3-201ENST00000249007 CAP1Q01518 475 aa15.69■□□□□ 0.1
RFPL3-201ENST00000249007 APOBEC3FQ8IUX4 373 aaKnown RBP15.69■□□□□ 0.1
RFPL3-201ENST00000249007 WNK4Q96J92 1243 aa15.69■□□□□ 0.1
RFPL3-201ENST00000249007 IRS4O14654 1257 aaPredicted RBP15.68■□□□□ 0.1
RFPL3-201ENST00000249007 MYCP01106 439 aaPredicted RBP15.68■□□□□ 0.1
RFPL3-201ENST00000249007 CLMNQ96JQ2 1002 aa15.68■□□□□ 0.1
RFPL3-201ENST00000249007 SEC31BQ9NQW1 1179 aa15.68■□□□□ 0.1
RFPL3-201ENST00000249007 LAMB1P07942 1786 aa15.67■□□□□ 0.1
RFPL3-201ENST00000249007 ATP5J2-PTCD1G3V325 749 aa15.67■□□□□ 0.1
RFPL3-201ENST00000249007 NFE2L2Q16236 605 aa15.67■□□□□ 0.1
RFPL3-201ENST00000249007 MXD3Q9BW11 206 aa15.67■□□□□ 0.1
RFPL3-201ENST00000249007 PTCH2Q9Y6C5 1203 aa15.67■□□□□ 0.1
RFPL3-201ENST00000249007 XDHP47989 1333 aa15.67■□□□□ 0.1
RFPL3-201ENST00000249007 MNX1P50219 401 aaPredicted RBP15.66■□□□□ 0.1
RFPL3-201ENST00000249007 ARHGEF6Q15052 776 aa15.66■□□□□ 0.1
RFPL3-201ENST00000249007 DACT2Q5SW24 774 aa15.66■□□□□ 0.1
RFPL3-201ENST00000249007 DPF3Q92784 378 aa15.66■□□□□ 0.1
RFPL3-201ENST00000249007 ISCA1Q9BUE6 129 aa15.66■□□□□ 0.1
RFPL3-201ENST00000249007 MYO3BQ8WXR4 1341 aa15.66■□□□□ 0.1
RFPL3-201ENST00000249007 PPP2R1AP30153 589 aa15.65■□□□□ 0.1
RFPL3-201ENST00000249007 MAP3K11Q16584 847 aa15.65■□□□□ 0.1
RFPL3-201ENST00000249007 PLBD2Q8NHP8 589 aa15.65■□□□□ 0.1
RFPL3-201ENST00000249007 FBXW7Q969H0 707 aa15.65■□□□□ 0.1
RFPL3-201ENST00000249007 PPP1R12BO60237 982 aaPredicted RBP15.65■□□□□ 0.1
RFPL3-201ENST00000249007 DEFB129Q9H1M3 183 aa15.65■□□□□ 0.1
RFPL3-201ENST00000249007 COL1A1P02452 1464 aaPredicted RBP15.64■□□□□ 0.09
RFPL3-201ENST00000249007 VCANP13611 3396 aa15.64■□□□□ 0.09
RFPL3-201ENST00000249007 ATP2B4P23634 1241 aa15.64■□□□□ 0.09
RFPL3-201ENST00000249007 MMP14P50281 582 aa15.64■□□□□ 0.09
RFPL3-201ENST00000249007 ANKRD13DQ6ZTN6 518 aa15.64■□□□□ 0.09
RFPL3-201ENST00000249007 PTPN18Q99952 460 aa15.64■□□□□ 0.09
RFPL3-201ENST00000249007 UNCXA6NJT0 531 aa15.63■□□□□ 0.09
RFPL3-201ENST00000249007 STRIP1Q5VSL9 837 aa15.63■□□□□ 0.09
RFPL3-201ENST00000249007 SH3TC2Q8TF17 1288 aa15.63■□□□□ 0.09
RFPL3-201ENST00000249007 PRO3102Q9H379 93 aa15.63■□□□□ 0.09
RFPL3-201ENST00000249007 CHPF2Q9P2E5 772 aa15.63■□□□□ 0.09
RFPL3-201ENST00000249007 MED23Q9ULK4 1368 aa15.62■□□□□ 0.09
RFPL3-201ENST00000249007 WTIPA6NIX2 430 aaPredicted RBP15.62■□□□□ 0.09
RFPL3-201ENST00000249007 HSP90B1P14625 803 aaKnown RBP15.62■□□□□ 0.09
RFPL3-201ENST00000249007 CCDC152Q4G0S7 254 aa15.62■□□□□ 0.09
RFPL3-201ENST00000249007 PLEKHF1Q96S99 279 aa15.62■□□□□ 0.09
RFPL3-201ENST00000249007 BCL11AQ9H165 835 aa15.62■□□□□ 0.09
RFPL3-201ENST00000249007 SSC5DA1L4H1 1573 aa15.62■□□□□ 0.09
RFPL3-201ENST00000249007 TESPA1A2RU30 521 aaPredicted RBP15.61■□□□□ 0.09
RFPL3-201ENST00000249007 GJA5P36382 358 aa15.61■□□□□ 0.09
RFPL3-201ENST00000249007 TRIM28Q13263 835 aaKnown RBP15.61■□□□□ 0.09
RFPL3-201ENST00000249007 KIAA0825Q8IV33 1275 aa15.61■□□□□ 0.09
RFPL3-201ENST00000249007 ZNF646O15015 1829 aaPredicted RBP15.61■□□□□ 0.09
RFPL3-201ENST00000249007 MAPK8IP3Q9UPT6 1336 aa15.6■□□□□ 0.09
RFPL3-201ENST00000249007 ANKRD18AQ8IVF6 992 aa15.6■□□□□ 0.09
RFPL3-201ENST00000249007 ZBTB38Q8NAP3 1195 aaPredicted RBP15.6■□□□□ 0.09
RFPL3-201ENST00000249007 ZBED3Q96IU2 234 aaPredicted RBP15.6■□□□□ 0.09
RFPL3-201ENST00000249007 CCDC85AQ96PX6 553 aaPredicted RBP15.6■□□□□ 0.09
RFPL3-201ENST00000249007 BABAM1Q9NWV8 329 aa15.6■□□□□ 0.09
RFPL3-201ENST00000249007 IREB2P48200 963 aaKnown RBP15.59■□□□□ 0.09
RFPL3-201ENST00000249007 SUPT20HL1Q3ZLR7 823 aa15.59■□□□□ 0.09
RFPL3-201ENST00000249007 SHISA4Q96DD7 197 aa15.59■□□□□ 0.09
RFPL3-201ENST00000249007 HTATIP2Q9BUP3 242 aa15.59■□□□□ 0.09
RFPL3-201ENST00000249007 PPP2R3BQ9Y5P8 575 aa15.59■□□□□ 0.09
RFPL3-201ENST00000249007 A0A1W2PPC1 479 aa15.59■□□□□ 0.09
RFPL3-201ENST00000249007 TAF1CQ15572 869 aaPredicted RBP15.59■□□□□ 0.09
RFPL3-201ENST00000249007 COA1Q9GZY4 146 aa15.59■□□□□ 0.09
RFPL3-201ENST00000249007 ZFYVE28Q9HCC9 887 aa15.59■□□□□ 0.09
RFPL3-201ENST00000249007 NR2E3Q9Y5X4 410 aa15.59■□□□□ 0.09
RFPL3-201ENST00000249007 SOX1O00570 391 aaPredicted RBP15.58■□□□□ 0.08
RFPL3-201ENST00000249007 DLGAP5Q15398 846 aa15.58■□□□□ 0.08
RFPL3-201ENST00000249007 KRT24Q2M2I5 525 aa15.58■□□□□ 0.08
RFPL3-201ENST00000249007 TTLL5Q6EMB2 1281 aa15.58■□□□□ 0.08
RFPL3-201ENST00000249007 ANKRD13AQ8IZ07 590 aa15.58■□□□□ 0.08
RFPL3-201ENST00000249007 LRCH3Q96II8 777 aa15.58■□□□□ 0.08
RFPL3-201ENST00000249007 HDGFL1Q5TGJ6 251 aa15.57■□□□□ 0.08
RFPL3-201ENST00000249007 OPTNQ96CV9 577 aa15.57■□□□□ 0.08
RFPL3-201ENST00000249007 MS4A4AQ96JQ5 239 aa15.57■□□□□ 0.08
RFPL3-201ENST00000249007 DBF4Q9UBU7 674 aaPredicted RBP15.57■□□□□ 0.08
RFPL3-201ENST00000249007 PDE8AO60658 829 aa15.56■□□□□ 0.08
RFPL3-201ENST00000249007 KIF22Q14807 665 aa15.56■□□□□ 0.08
RFPL3-201ENST00000249007 NBPF12Q5TAG4 269 aaPredicted RBP15.56■□□□□ 0.08
RFPL3-201ENST00000249007 NKX2-3Q8TAU0 364 aa15.56■□□□□ 0.08
RFPL3-201ENST00000249007 BRI3BPQ8WY22 251 aa15.56■□□□□ 0.08
RFPL3-201ENST00000249007 PNNQ9H307 717 aaKnown RBP15.56■□□□□ 0.08
RFPL3-201ENST00000249007 ZNF804BA4D1E1 1349 aa15.55■□□□□ 0.08
RFPL3-201ENST00000249007 USP2O75604 605 aaPredicted RBP15.55■□□□□ 0.08
RFPL3-201ENST00000249007 CCT4P50991 539 aaKnown RBP15.55■□□□□ 0.08
RFPL3-201ENST00000249007 MTFR1Q15390 333 aa15.55■□□□□ 0.08
RFPL3-201ENST00000249007 TXNRD3Q86VQ6 643 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms