RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 PASKQ96RG2 1323 aa15.97■□□□□ 0.15
VPREB3-201ENST00000248948 USP17L3A6NCW0 530 aa15.97■□□□□ 0.15
VPREB3-201ENST00000248948 USP17L4A6NCW7 530 aa15.97■□□□□ 0.15
VPREB3-201ENST00000248948 WTIPA6NIX2 430 aaPredicted RBP15.97■□□□□ 0.15
VPREB3-201ENST00000248948 TAF5LO75529 589 aa15.97■□□□□ 0.15
VPREB3-201ENST00000248948 RFX5P48382 616 aaPredicted RBP15.97■□□□□ 0.15
VPREB3-201ENST00000248948 RSBN1LQ6PCB5 846 aaPredicted RBP15.97■□□□□ 0.15
VPREB3-201ENST00000248948 USP17L1Q7RTZ2 530 aa15.97■□□□□ 0.15
VPREB3-201ENST00000248948 ZNF804AQ7Z570 1209 aa15.97■□□□□ 0.15
VPREB3-201ENST00000248948 TXNRD3Q86VQ6 643 aa15.97■□□□□ 0.15
VPREB3-201ENST00000248948 FTSJ3Q8IY81 847 aaKnown RBP15.97■□□□□ 0.15
VPREB3-201ENST00000248948 ZBTB12Q9Y330 459 aaPredicted RBP15.97■□□□□ 0.15
VPREB3-201ENST00000248948 RIPOR2Q9Y4F9 1068 aa15.97■□□□□ 0.15
VPREB3-201ENST00000248948 H7C1D1 291 aa15.96■□□□□ 0.15
VPREB3-201ENST00000248948 MTX1Q13505 466 aa15.96■□□□□ 0.15
VPREB3-201ENST00000248948 UBE4AQ14139 1066 aa15.96■□□□□ 0.15
VPREB3-201ENST00000248948 STRIP1Q5VSL9 837 aa15.96■□□□□ 0.15
VPREB3-201ENST00000248948 VGLL2Q8N8G2 317 aa15.96■□□□□ 0.15
VPREB3-201ENST00000248948 HELBQ8NG08 1087 aaPredicted RBP15.96■□□□□ 0.15
VPREB3-201ENST00000248948 CLUAP1Q96AJ1 413 aa15.96■□□□□ 0.15
VPREB3-201ENST00000248948 PUS3Q9BZE2 481 aaKnown RBP15.96■□□□□ 0.15
VPREB3-201ENST00000248948 KCNQ5Q9NR82 932 aa15.96■□□□□ 0.15
VPREB3-201ENST00000248948 CNOT7Q9UIV1 285 aaKnown RBP15.96■□□□□ 0.15
VPREB3-201ENST00000248948 TNNQ9UQP3 1299 aa15.96■□□□□ 0.15
VPREB3-201ENST00000248948 CIAO1O76071 339 aa15.95■□□□□ 0.14
VPREB3-201ENST00000248948 PTPN12Q05209 780 aaKnown RBP15.95■□□□□ 0.14
VPREB3-201ENST00000248948 DACT2Q5SW24 774 aa15.95■□□□□ 0.14
VPREB3-201ENST00000248948 DZIP1LQ8IYY4 767 aaKnown RBP15.95■□□□□ 0.14
VPREB3-201ENST00000248948 TMEM57Q8N5G2 664 aa15.95■□□□□ 0.14
VPREB3-201ENST00000248948 ZC3H15Q8WU90 426 aaKnown RBP15.95■□□□□ 0.14
VPREB3-201ENST00000248948 CLEC11AQ9Y240 323 aa15.95■□□□□ 0.14
VPREB3-201ENST00000248948 EYA2O00167 538 aa15.94■□□□□ 0.14
VPREB3-201ENST00000248948 PDE8BO95263 885 aa15.94■□□□□ 0.14
VPREB3-201ENST00000248948 IL1R1P14778 569 aa15.94■□□□□ 0.14
VPREB3-201ENST00000248948 ZNF280AP59817 542 aaPredicted RBP15.94■□□□□ 0.14
VPREB3-201ENST00000248948 LRRC24Q50LG9 513 aa15.94■□□□□ 0.14
VPREB3-201ENST00000248948 METTL24Q5JXM2 366 aa15.94■□□□□ 0.14
VPREB3-201ENST00000248948 TRPM4Q8TD43 1214 aa15.94■□□□□ 0.14
VPREB3-201ENST00000248948 GMLQ99445 158 aa15.94■□□□□ 0.14
VPREB3-201ENST00000248948 CD209Q9NNX6 404 aa15.94■□□□□ 0.14
VPREB3-201ENST00000248948 POLR2AP24928 1970 aaKnown RBP15.94■□□□□ 0.14
VPREB3-201ENST00000248948 THSD7BQ9C0I4 1608 aa15.94■□□□□ 0.14
VPREB3-201ENST00000248948 ITGBL1O95965 494 aaPredicted RBP15.93■□□□□ 0.14
VPREB3-201ENST00000248948 GNAI2P04899 355 aa15.93■□□□□ 0.14
VPREB3-201ENST00000248948 MMP14P50281 582 aa15.93■□□□□ 0.14
VPREB3-201ENST00000248948 PUM3Q15397 648 aaKnown RBP15.93■□□□□ 0.14
VPREB3-201ENST00000248948 MAP1SQ66K74 1059 aaPredicted RBP15.93■□□□□ 0.14
VPREB3-201ENST00000248948 CNTROBQ8N137 903 aa15.93■□□□□ 0.14
VPREB3-201ENST00000248948 KLHDC4Q8TBB5 520 aa15.93■□□□□ 0.14
VPREB3-201ENST00000248948 COPRSQ9NQ92 184 aa15.93■□□□□ 0.14
VPREB3-201ENST00000248948 PGAP2Q9UHJ9 254 aa15.93■□□□□ 0.14
VPREB3-201ENST00000248948 SHTN1A0MZ66 631 aa15.92■□□□□ 0.14
VPREB3-201ENST00000248948 SNAP23O00161 211 aa15.92■□□□□ 0.14
VPREB3-201ENST00000248948 PLIN1O60240 522 aa15.92■□□□□ 0.14
VPREB3-201ENST00000248948 MS4A1P11836 297 aa15.92■□□□□ 0.14
VPREB3-201ENST00000248948 KIF4BQ2VIQ3 1234 aa15.92■□□□□ 0.14
VPREB3-201ENST00000248948 CREBZFQ9NS37 354 aa15.92■□□□□ 0.14
VPREB3-201ENST00000248948 RCAN3Q9UKA8 241 aa15.92■□□□□ 0.14
VPREB3-201ENST00000248948 USP17L8P0C7I0 530 aa15.91■□□□□ 0.14
VPREB3-201ENST00000248948 HIRAP54198 1017 aaPredicted RBP15.91■□□□□ 0.14
VPREB3-201ENST00000248948 FKBP1AP62942 108 aaKnown RBP15.91■□□□□ 0.14
VPREB3-201ENST00000248948 ITPRIPQ8IWB1 547 aa15.91■□□□□ 0.14
VPREB3-201ENST00000248948 SRGAP3O43295 1099 aa15.9■□□□□ 0.14
VPREB3-201ENST00000248948 RLBP1P12271 317 aa15.9■□□□□ 0.14
VPREB3-201ENST00000248948 FGFR2P21802 821 aa15.9■□□□□ 0.14
VPREB3-201ENST00000248948 IL15P40933 162 aaPredicted RBP15.9■□□□□ 0.14
VPREB3-201ENST00000248948 TBC1D10BQ4KMP7 808 aaPredicted RBP15.9■□□□□ 0.14
VPREB3-201ENST00000248948 TTLL5Q6EMB2 1281 aa15.9■□□□□ 0.14
VPREB3-201ENST00000248948 ATG9AQ7Z3C6 839 aa15.9■□□□□ 0.14
VPREB3-201ENST00000248948 SAMD7Q7Z3H4 446 aa15.9■□□□□ 0.14
VPREB3-201ENST00000248948 FBXW7Q969H0 707 aa15.9■□□□□ 0.14
VPREB3-201ENST00000248948 FAM205AQ6ZU69 1335 aa15.9■□□□□ 0.14
VPREB3-201ENST00000248948 EGFRP00533 1210 aa15.89■□□□□ 0.13
VPREB3-201ENST00000248948 IFIT1P09914 478 aaKnown RBP15.89■□□□□ 0.13
VPREB3-201ENST00000248948 HIBADHP31937 336 aaKnown RBP15.89■□□□□ 0.13
VPREB3-201ENST00000248948 GTF2IP78347 998 aa15.89■□□□□ 0.13
VPREB3-201ENST00000248948 CAVIN4Q5BKX8 364 aa15.89■□□□□ 0.13
VPREB3-201ENST00000248948 OGFOD1Q8N543 542 aa15.89■□□□□ 0.13
VPREB3-201ENST00000248948 MYOZ2Q9NPC6 264 aa15.89■□□□□ 0.13
VPREB3-201ENST00000248948 PITPNM2Q9BZ72 1349 aa15.89■□□□□ 0.13
VPREB3-201ENST00000248948 TMEM88BA6NKF7 163 aa15.88■□□□□ 0.13
VPREB3-201ENST00000248948 SLC5A1P13866 664 aa15.88■□□□□ 0.13
VPREB3-201ENST00000248948 GYG1P46976 350 aa15.88■□□□□ 0.13
VPREB3-201ENST00000248948 TDRD7Q8NHU6 1098 aaKnown RBP15.88■□□□□ 0.13
VPREB3-201ENST00000248948 LPIN2Q92539 896 aa15.88■□□□□ 0.13
VPREB3-201ENST00000248948 FAM84BQ96KN1 310 aaPredicted RBP15.88■□□□□ 0.13
VPREB3-201ENST00000248948 SIL1Q9H173 461 aa15.88■□□□□ 0.13
VPREB3-201ENST00000248948 COL1A1P02452 1464 aaPredicted RBP15.88■□□□□ 0.13
VPREB3-201ENST00000248948 SASH1O94885 1247 aa15.87■□□□□ 0.13
VPREB3-201ENST00000248948 CDC37L1Q7L3B6 337 aa15.87■□□□□ 0.13
VPREB3-201ENST00000248948 FBXO33Q7Z6M2 555 aa15.87■□□□□ 0.13
VPREB3-201ENST00000248948 VPS37DQ86XT2 251 aa15.87■□□□□ 0.13
VPREB3-201ENST00000248948 KLRG1Q96E93 195 aa15.87■□□□□ 0.13
VPREB3-201ENST00000248948 MXD3Q9BW11 206 aa15.87■□□□□ 0.13
VPREB3-201ENST00000248948 GGA3Q9NZ52 723 aa15.87■□□□□ 0.13
VPREB3-201ENST00000248948 HDAC9Q9UKV0 1011 aa15.87■□□□□ 0.13
VPREB3-201ENST00000248948 PAPPA2Q9BXP8 1791 aa15.87■□□□□ 0.13
VPREB3-201ENST00000248948 MAST2Q6P0Q8 1798 aa15.86■□□□□ 0.13
VPREB3-201ENST00000248948 ZBTB7BO15156 539 aaPredicted RBP15.86■□□□□ 0.13
VPREB3-201ENST00000248948 ZBTB22O15209 634 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms