RNA–Protein interactions for RNA: ENST00000247005.7

GDF1-201, Transcript of growth differentiation factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GDF1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1-201ENST00000247005 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.4■■■□□ 2.14
GDF1-201ENST00000247005 RIC1Q4ADV7 1423 aa28.4■■■□□ 2.14
GDF1-201ENST00000247005 DZIP3Q86Y13 1208 aaKnown RBP28.39■■■□□ 2.14
GDF1-201ENST00000247005 GPHNQ9NQX3 736 aaPredicted RBP28.39■■■□□ 2.14
GDF1-201ENST00000247005 FBXO3Q9UK99 471 aa28.39■■■□□ 2.14
GDF1-201ENST00000247005 LAMA4Q16363 1823 aa28.39■■■□□ 2.14
GDF1-201ENST00000247005 FAM177BA6PVY3 158 aa28.39■■■□□ 2.14
GDF1-201ENST00000247005 HMGB1P09429 215 aaKnown RBP28.39■■■□□ 2.14
GDF1-201ENST00000247005 LIG1P18858 919 aa28.38■■■□□ 2.13
GDF1-201ENST00000247005 CDHR2Q9BYE9 1310 aa28.38■■■□□ 2.13
GDF1-201ENST00000247005 PFKFB2O60825 505 aa28.38■■■□□ 2.13
GDF1-201ENST00000247005 ADAMTS2O95450 1211 aa28.38■■■□□ 2.13
GDF1-201ENST00000247005 CTDNEP1O95476 244 aa28.38■■■□□ 2.13
GDF1-201ENST00000247005 MCAMP43121 646 aa28.38■■■□□ 2.13
GDF1-201ENST00000247005 NAP1L5Q96NT1 182 aaPredicted RBP28.38■■■□□ 2.13
GDF1-201ENST00000247005 EIF2AK3Q9NZJ5 1116 aaKnown RBP28.38■■■□□ 2.13
GDF1-201ENST00000247005 UBN2Q6ZU65 1347 aa28.38■■■□□ 2.13
GDF1-201ENST00000247005 ANKRD18BA2A2Z9 1011 aa28.37■■■□□ 2.13
GDF1-201ENST00000247005 MPNDQ8N594 471 aa28.37■■■□□ 2.13
GDF1-201ENST00000247005 ACSBG1Q96GR2 724 aa28.37■■■□□ 2.13
GDF1-201ENST00000247005 H3BQV1 296 aa28.37■■■□□ 2.13
GDF1-201ENST00000247005 MSNP26038 577 aaKnown RBP28.37■■■□□ 2.13
GDF1-201ENST00000247005 IFFO2Q5TF58 517 aa28.37■■■□□ 2.13
GDF1-201ENST00000247005 SPATA32Q96LK8 384 aa28.37■■■□□ 2.13
GDF1-201ENST00000247005 CAMK4Q16566 473 aa28.36■■■□□ 2.13
GDF1-201ENST00000247005 FAM184AQ8NB25 1140 aa28.36■■■□□ 2.13
GDF1-201ENST00000247005 NSUN7Q8NE18 718 aaKnown RBP28.36■■■□□ 2.13
GDF1-201ENST00000247005 HELBQ8NG08 1087 aaPredicted RBP28.36■■■□□ 2.13
GDF1-201ENST00000247005 LETM1O95202 739 aaPredicted RBP28.35■■■□□ 2.13
GDF1-201ENST00000247005 FGAP02671 866 aa28.35■■■□□ 2.13
GDF1-201ENST00000247005 USP25Q9UHP3 1055 aa28.35■■■□□ 2.13
GDF1-201ENST00000247005 PDIA4P13667 645 aaKnown RBP28.35■■■□□ 2.13
GDF1-201ENST00000247005 SMARCC2Q8TAQ2 1214 aa28.34■■■□□ 2.13
GDF1-201ENST00000247005 LEO1Q8WVC0 666 aaPredicted RBP28.34■■■□□ 2.13
GDF1-201ENST00000247005 RESTQ13127 1097 aa28.34■■■□□ 2.13
GDF1-201ENST00000247005 FUCA2Q9BTY2 467 aa28.34■■■□□ 2.13
GDF1-201ENST00000247005 LRP6O75581 1613 aa28.34■■■□□ 2.13
GDF1-201ENST00000247005 PTPDC1A2A3K4 754 aa28.33■■■□□ 2.13
GDF1-201ENST00000247005 CEBPZQ03701 1054 aaKnown RBP28.33■■■□□ 2.13
GDF1-201ENST00000247005 NOL7Q9UMY1 257 aaKnown RBP28.33■■■□□ 2.13
GDF1-201ENST00000247005 SNAP23O00161 211 aa28.33■■■□□ 2.13
GDF1-201ENST00000247005 VGLL2Q8N8G2 317 aa28.33■■■□□ 2.13
GDF1-201ENST00000247005 AGXT2Q9BYV1 514 aa28.33■■■□□ 2.13
GDF1-201ENST00000247005 PDIA3P30101 505 aaKnown RBP28.32■■■□□ 2.12
GDF1-201ENST00000247005 HS1BP3Q53T59 392 aa28.32■■■□□ 2.12
GDF1-201ENST00000247005 SCAND2PQ9GZW5 306 aaPredicted RBP28.32■■■□□ 2.12
GDF1-201ENST00000247005 COL14A1Q05707 1796 aaKnown RBP28.32■■■□□ 2.12
GDF1-201ENST00000247005 ELP1O95163 1332 aa28.32■■■□□ 2.12
GDF1-201ENST00000247005 TICAM2Q86XR7 235 aa28.32■■■□□ 2.12
GDF1-201ENST00000247005 APPBP2Q92624 585 aa28.32■■■□□ 2.12
GDF1-201ENST00000247005 PDE8AO60658 829 aa28.31■■■□□ 2.12
GDF1-201ENST00000247005 ZFYP08048 801 aaPredicted RBP28.31■■■□□ 2.12
GDF1-201ENST00000247005 IL6STP40189 918 aaPredicted RBP28.31■■■□□ 2.12
GDF1-201ENST00000247005 GOLGA6L4A6NEF3 574 aa28.31■■■□□ 2.12
GDF1-201ENST00000247005 GPAA1O43292 621 aa28.31■■■□□ 2.12
GDF1-201ENST00000247005 GUCY1B3Q02153 619 aa28.31■■■□□ 2.12
GDF1-201ENST00000247005 SPEF2Q9C093 1822 aa28.3■■■□□ 2.12
GDF1-201ENST00000247005 PHKA1P46020 1223 aa28.3■■■□□ 2.12
GDF1-201ENST00000247005 LRRFIP1Q32MZ4 808 aaKnown RBP28.3■■■□□ 2.12
GDF1-201ENST00000247005 RAB11FIP4Q86YS3 637 aa28.3■■■□□ 2.12
GDF1-201ENST00000247005 PGBD1Q96JS3 809 aa28.3■■■□□ 2.12
GDF1-201ENST00000247005 DACT1Q9NYF0 836 aa28.3■■■□□ 2.12
GDF1-201ENST00000247005 PDE8BO95263 885 aa28.3■■■□□ 2.12
GDF1-201ENST00000247005 ZNF34Q8IZ26 560 aa28.3■■■□□ 2.12
GDF1-201ENST00000247005 FTOQ9C0B1 505 aaKnown RBP eCLIP28.3■■■□□ 2.12
GDF1-201ENST00000247005 PIH1D3Q9NQM4 214 aaKnown RBP28.3■■■□□ 2.12
GDF1-201ENST00000247005 IMMTQ16891 758 aaKnown RBP28.29■■■□□ 2.12
GDF1-201ENST00000247005 SLC9C2Q5TAH2 1124 aa28.29■■■□□ 2.12
GDF1-201ENST00000247005 LLPHQ9BRT6 129 aaKnown RBP28.29■■■□□ 2.12
GDF1-201ENST00000247005 ROBO1Q9Y6N7 1651 aa28.29■■■□□ 2.12
GDF1-201ENST00000247005 NUP98P52948 1817 aa28.29■■■□□ 2.12
GDF1-201ENST00000247005 SUSD4Q5VX71 490 aa28.29■■■□□ 2.12
GDF1-201ENST00000247005 COL16A1Q07092 1604 aaPredicted RBP28.28■■■□□ 2.12
GDF1-201ENST00000247005 IDH1O75874 414 aaKnown RBP28.28■■■□□ 2.12
GDF1-201ENST00000247005 CKAP2LQ8IYA6 745 aa28.28■■■□□ 2.12
GDF1-201ENST00000247005 DENND2AQ9ULE3 1009 aa28.28■■■□□ 2.12
GDF1-201ENST00000247005 ERVV-1B6SEH8 477 aa28.28■■■□□ 2.12
GDF1-201ENST00000247005 PTMAP06454 111 aaKnown RBP28.28■■■□□ 2.12
GDF1-201ENST00000247005 PLCB2Q00722 1185 aa28.28■■■□□ 2.12
GDF1-201ENST00000247005 CCDC102BQ68D86 513 aa28.28■■■□□ 2.12
GDF1-201ENST00000247005 INTS5Q6P9B9 1019 aaKnown RBP28.28■■■□□ 2.12
GDF1-201ENST00000247005 CTNNA3Q9UI47 895 aa28.28■■■□□ 2.12
GDF1-201ENST00000247005 NWD2Q9ULI1 1742 aa28.28■■■□□ 2.12
GDF1-201ENST00000247005 SLIT2O94813 1529 aa28.27■■■□□ 2.12
GDF1-201ENST00000247005 ATP6V1AP38606 617 aa28.27■■■□□ 2.12
GDF1-201ENST00000247005 DDB1Q16531 1140 aa28.27■■■□□ 2.12
GDF1-201ENST00000247005 NUP62CLQ9H1M0 184 aa28.27■■■□□ 2.12
GDF1-201ENST00000247005 CCDC39Q9UFE4 941 aa28.27■■■□□ 2.12
GDF1-201ENST00000247005 UVSSAQ2YD98 709 aa28.26■■■□□ 2.11
GDF1-201ENST00000247005 NKX2-3Q8TAU0 364 aa28.26■■■□□ 2.11
GDF1-201ENST00000247005 SEC31BQ9NQW1 1179 aa28.26■■■□□ 2.11
GDF1-201ENST00000247005 ZKSCAN5Q9Y2L8 839 aa28.26■■■□□ 2.11
GDF1-201ENST00000247005 ADCY5O95622 1261 aa28.26■■■□□ 2.11
GDF1-201ENST00000247005 EIF5P55010 431 aaKnown RBP28.26■■■□□ 2.11
GDF1-201ENST00000247005 NR1I2O75469 434 aa28.25■■■□□ 2.11
GDF1-201ENST00000247005 CRKLP46109 303 aaKnown RBP28.25■■■□□ 2.11
GDF1-201ENST00000247005 ZNF274Q96GC6 653 aaPredicted RBP28.25■■■□□ 2.11
GDF1-201ENST00000247005 AKAP11Q9UKA4 1901 aa28.25■■■□□ 2.11
GDF1-201ENST00000247005 PRC1O43663 620 aa28.25■■■□□ 2.11
GDF1-201ENST00000247005 ADD2P35612 726 aa28.25■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms