RNA–Protein interactions for RNA: ENST00000244050.2

SNAI1-201, Transcript of snail family transcriptional repressor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAI1, Length 1,686 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI1-201ENST00000244050 FAM177BA6PVY3 158 aa15.16■□□□□ 0.02
SNAI1-201ENST00000244050 SLC27A2O14975 620 aa15.16■□□□□ 0.02
SNAI1-201ENST00000244050 PDE8AO60658 829 aa15.16■□□□□ 0.02
SNAI1-201ENST00000244050 CIAO1O76071 339 aa15.16■□□□□ 0.02
SNAI1-201ENST00000244050 CTSWP56202 376 aa15.16■□□□□ 0.02
SNAI1-201ENST00000244050 RC3H1Q5TC82 1133 aaKnown RBP15.16■□□□□ 0.02
SNAI1-201ENST00000244050 FOXD4L5Q5VV16 416 aaPredicted RBP15.16■□□□□ 0.02
SNAI1-201ENST00000244050 SUSD4Q5VX71 490 aa15.16■□□□□ 0.02
SNAI1-201ENST00000244050 ATG9AQ7Z3C6 839 aa15.16■□□□□ 0.02
SNAI1-201ENST00000244050 FOXD4L4Q8WXT5 416 aaPredicted RBP15.16■□□□□ 0.02
SNAI1-201ENST00000244050 HAUS7Q99871 368 aa15.16■□□□□ 0.02
SNAI1-201ENST00000244050 HMG20BQ9P0W2 317 aa15.16■□□□□ 0.02
SNAI1-201ENST00000244050 LAMB2P55268 1798 aa15.16■□□□□ 0.02
SNAI1-201ENST00000244050 KCNJ4P48050 445 aa15.16■□□□□ 0.02
SNAI1-201ENST00000244050 LRRC24Q50LG9 513 aa15.16■□□□□ 0.02
SNAI1-201ENST00000244050 USPL1Q5W0Q7 1092 aa15.16■□□□□ 0.02
SNAI1-201ENST00000244050 FLAD1Q8NFF5 587 aa15.16■□□□□ 0.02
SNAI1-201ENST00000244050 TTLL11Q8NHH1 800 aa15.16■□□□□ 0.02
SNAI1-201ENST00000244050 UTP14AQ9BVJ6 771 aaKnown RBP15.16■□□□□ 0.02
SNAI1-201ENST00000244050 SMC3Q9UQE7 1217 aa15.16■□□□□ 0.02
SNAI1-201ENST00000244050 NIP7Q9Y221 180 aaKnown RBP eCLIP15.16■□□□□ 0.02
SNAI1-201ENST00000244050 CD2APQ9Y5K6 639 aa15.16■□□□□ 0.02
SNAI1-201ENST00000244050 SH3TC1Q8TE82 1336 aa15.15■□□□□ 0.02
SNAI1-201ENST00000244050 DDX60Q8IY21 1712 aaKnown RBP15.15■□□□□ 0.02
SNAI1-201ENST00000244050 GNPATO15228 680 aa15.15■□□□□ 0.02
SNAI1-201ENST00000244050 GRIN3BO60391 1043 aa15.15■□□□□ 0.02
SNAI1-201ENST00000244050 TAF5LO75529 589 aa15.15■□□□□ 0.02
SNAI1-201ENST00000244050 CPA1P15085 419 aa15.15■□□□□ 0.02
SNAI1-201ENST00000244050 CLEC4GQ6UXB4 293 aa15.15■□□□□ 0.02
SNAI1-201ENST00000244050 TMEM87AQ8NBN3 555 aa15.15■□□□□ 0.02
SNAI1-201ENST00000244050 CHAMP1Q96JM3 812 aa15.15■□□□□ 0.02
SNAI1-201ENST00000244050 DBNDD2Q9BQY9 259 aa15.15■□□□□ 0.02
SNAI1-201ENST00000244050 FBXO3Q9UK99 471 aa15.15■□□□□ 0.02
SNAI1-201ENST00000244050 ZSCAN22P10073 491 aaPredicted RBP15.14■□□□□ 0.01
SNAI1-201ENST00000244050 PDIA4P13667 645 aaKnown RBP15.14■□□□□ 0.01
SNAI1-201ENST00000244050 AK7Q96M32 723 aa15.14■□□□□ 0.01
SNAI1-201ENST00000244050 PUS3Q9BZE2 481 aaKnown RBP15.14■□□□□ 0.01
SNAI1-201ENST00000244050 GREM2Q9H772 168 aa15.14■□□□□ 0.01
SNAI1-201ENST00000244050 UBR3Q6ZT12 1888 aa15.14■□□□□ 0.01
SNAI1-201ENST00000244050 ANKRD18BA2A2Z9 1011 aa15.13■□□□□ 0.01
SNAI1-201ENST00000244050 STX6O43752 255 aa15.13■□□□□ 0.01
SNAI1-201ENST00000244050 RPS6KA4O75676 772 aa15.13■□□□□ 0.01
SNAI1-201ENST00000244050 LARGE1O95461 756 aa15.13■□□□□ 0.01
SNAI1-201ENST00000244050 SYT1P21579 422 aa15.13■□□□□ 0.01
SNAI1-201ENST00000244050 ITGA6P23229 1130 aa15.13■□□□□ 0.01
SNAI1-201ENST00000244050 NASPP49321 788 aaPredicted RBP15.13■□□□□ 0.01
SNAI1-201ENST00000244050 ANKRD1Q15327 319 aa15.13■□□□□ 0.01
SNAI1-201ENST00000244050 TMEM63CQ9P1W3 806 aa15.13■□□□□ 0.01
SNAI1-201ENST00000244050 ZNF609O15014 1411 aa15.13■□□□□ 0.01
SNAI1-201ENST00000244050 ZNF589Q86UQ0 364 aaPredicted RBP15.12■□□□□ 0.01
SNAI1-201ENST00000244050 EDC3Q96F86 508 aaKnown RBP15.12■□□□□ 0.01
SNAI1-201ENST00000244050 NEUROD6Q96NK8 337 aa15.12■□□□□ 0.01
SNAI1-201ENST00000244050 PPP1R9BQ96SB3 815 aa15.12■□□□□ 0.01
SNAI1-201ENST00000244050 CEP126Q9P2H0 1117 aa15.12■□□□□ 0.01
SNAI1-201ENST00000244050 NSFL1CQ9UNZ2 370 aaKnown RBP15.12■□□□□ 0.01
SNAI1-201ENST00000244050 RTCBQ9Y3I0 505 aaKnown RBP15.12■□□□□ 0.01
SNAI1-201ENST00000244050 CEP350Q5VT06 3117 aa15.12■□□□□ 0.01
SNAI1-201ENST00000244050 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.12■□□□□ 0.01
SNAI1-201ENST00000244050 NTSR2O95665 410 aa15.12■□□□□ 0.01
SNAI1-201ENST00000244050 HSP90B1P14625 803 aaKnown RBP15.12■□□□□ 0.01
SNAI1-201ENST00000244050 CCDC173Q0VFZ6 552 aa15.12■□□□□ 0.01
SNAI1-201ENST00000244050 KRT32Q14532 448 aa15.12■□□□□ 0.01
SNAI1-201ENST00000244050 ME3Q16798 604 aa15.12■□□□□ 0.01
SNAI1-201ENST00000244050 BLOC1S2Q6QNY1 142 aa15.12■□□□□ 0.01
SNAI1-201ENST00000244050 LRSAM1Q6UWE0 723 aa15.12■□□□□ 0.01
SNAI1-201ENST00000244050 LARP6Q9BRS8 491 aaKnown RBP15.12■□□□□ 0.01
SNAI1-201ENST00000244050 RRAGDQ9NQL2 400 aaPredicted RBP15.12■□□□□ 0.01
SNAI1-201ENST00000244050 RBM27Q9P2N5 1060 aaKnown RBP15.12■□□□□ 0.01
SNAI1-201ENST00000244050 ATP6V1DQ9Y5K8 247 aa15.12■□□□□ 0.01
SNAI1-201ENST00000244050 C4AP0C0L4 1744 aa15.11■□□□□ 0.01
SNAI1-201ENST00000244050 PHF14O94880 888 aa15.11■□□□□ 0.01
SNAI1-201ENST00000244050 F13A1P00488 732 aa15.11■□□□□ 0.01
SNAI1-201ENST00000244050 HCLS1P14317 486 aaPredicted RBP15.11■□□□□ 0.01
SNAI1-201ENST00000244050 RPS6KB1P23443 525 aa15.11■□□□□ 0.01
SNAI1-201ENST00000244050 HMGB2P26583 209 aaKnown RBP15.11■□□□□ 0.01
SNAI1-201ENST00000244050 MCMDC2Q4G0Z9 681 aa15.11■□□□□ 0.01
SNAI1-201ENST00000244050 LDHAL6AQ6ZMR3 332 aa15.11■□□□□ 0.01
SNAI1-201ENST00000244050 USP48Q86UV5 1035 aa15.11■□□□□ 0.01
SNAI1-201ENST00000244050 CCDC83Q8IWF9 413 aa15.11■□□□□ 0.01
SNAI1-201ENST00000244050 KBTBD3Q8NAB2 608 aa15.11■□□□□ 0.01
SNAI1-201ENST00000244050 SYAP1Q96A49 352 aaPredicted RBP15.11■□□□□ 0.01
SNAI1-201ENST00000244050 NARFQ9UHQ1 456 aa15.11■□□□□ 0.01
SNAI1-201ENST00000244050 A0A1B0GUL7 405 aa15.1■□□□□ 0.01
SNAI1-201ENST00000244050 RGL2O15211 777 aa15.1■□□□□ 0.01
SNAI1-201ENST00000244050 ZPR1O75312 459 aa15.1■□□□□ 0.01
SNAI1-201ENST00000244050 GJB2P29033 226 aa15.1■□□□□ 0.01
SNAI1-201ENST00000244050 TIMM10P62072 90 aa15.1■□□□□ 0.01
SNAI1-201ENST00000244050 ST3GAL1Q11201 340 aa15.1■□□□□ 0.01
SNAI1-201ENST00000244050 ANP32BQ92688 251 aaKnown RBP15.1■□□□□ 0.01
SNAI1-201ENST00000244050 TPCN1Q9ULQ1 816 aa15.1■□□□□ 0.01
SNAI1-201ENST00000244050 AKAP2Q9Y2D5 859 aa15.1■□□□□ 0.01
SNAI1-201ENST00000244050 U3KPZ7 1027 aaPredicted RBP15.1■□□□□ 0.01
SNAI1-201ENST00000244050 SPEF2Q9C093 1822 aa15.1■□□□□ 0.01
SNAI1-201ENST00000244050 BICDL1Q6ZP65 573 aa15.09■□□□□ 0.01
SNAI1-201ENST00000244050 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.09■□□□□ 0.01
SNAI1-201ENST00000244050 DNAJC2Q99543 621 aaKnown RBP15.09■□□□□ 0.01
SNAI1-201ENST00000244050 CNNM1Q9NRU3 951 aa15.09■□□□□ 0.01
SNAI1-201ENST00000244050 METTL24Q5JXM2 366 aa15.09■□□□□ 0.01
SNAI1-201ENST00000244050 RBSNQ9H1K0 784 aa15.09■□□□□ 0.01
SNAI1-201ENST00000244050 HELLSQ9NRZ9 838 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms