RNA–Protein interactions for RNA: ENST00000236017.5

APH1A-201, Transcript of aph-1 homolog A, gamma-secretase subunit, humanhuman

TSL 2

Gene APH1A, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1A-201ENST00000236017 SALL2Q9Y467 1007 aaPredicted RBP23.06■■□□□ 1.28
APH1A-201ENST00000236017 VAMP4O75379 141 aa23.05■■□□□ 1.28
APH1A-201ENST00000236017 LINS1Q8NG48 757 aa23.05■■□□□ 1.28
APH1A-201ENST00000236017 CDCA5Q96FF9 252 aa23.05■■□□□ 1.28
APH1A-201ENST00000236017 ZIC5Q96T25 663 aa23.05■■□□□ 1.28
APH1A-201ENST00000236017 MPHOSPH8Q99549 860 aa23.05■■□□□ 1.28
APH1A-201ENST00000236017 ANKRD2Q9GZV1 360 aa23.05■■□□□ 1.28
APH1A-201ENST00000236017 COA1Q9GZY4 146 aa23.05■■□□□ 1.28
APH1A-201ENST00000236017 ASTN2O75129 1339 aaPredicted RBP23.05■■□□□ 1.28
APH1A-201ENST00000236017 FANCIQ9NVI1 1328 aa23.05■■□□□ 1.28
APH1A-201ENST00000236017 WTIPA6NIX2 430 aaPredicted RBP23.04■■□□□ 1.28
APH1A-201ENST00000236017 ITGA6P23229 1130 aa23.04■■□□□ 1.28
APH1A-201ENST00000236017 FAM155AB1AL88 458 aaPredicted RBP23.03■■□□□ 1.28
APH1A-201ENST00000236017 CSF1RP07333 972 aa23.03■■□□□ 1.28
APH1A-201ENST00000236017 OGFOD1Q8N543 542 aa23.03■■□□□ 1.28
APH1A-201ENST00000236017 PITPNM2Q9BZ72 1349 aa23.03■■□□□ 1.28
APH1A-201ENST00000236017 CASP7P55210 303 aa23.02■■□□□ 1.28
APH1A-201ENST00000236017 KIF23Q02241 960 aaPredicted RBP23.02■■□□□ 1.28
APH1A-201ENST00000236017 STRIP1Q5VSL9 837 aa23.02■■□□□ 1.28
APH1A-201ENST00000236017 FBXW7Q969H0 707 aa23.02■■□□□ 1.28
APH1A-201ENST00000236017 ZNF804BA4D1E1 1349 aa23.02■■□□□ 1.28
APH1A-201ENST00000236017 MYO3BQ8WXR4 1341 aa23.02■■□□□ 1.28
APH1A-201ENST00000236017 MMP14P50281 582 aa23.01■■□□□ 1.27
APH1A-201ENST00000236017 FKBP1BP68106 108 aa23.01■■□□□ 1.27
APH1A-201ENST00000236017 EXOSC9Q06265 439 aaKnown RBP23.01■■□□□ 1.27
APH1A-201ENST00000236017 FAM161AQ3B820 660 aa23.01■■□□□ 1.27
APH1A-201ENST00000236017 DACT2Q5SW24 774 aa23.01■■□□□ 1.27
APH1A-201ENST00000236017 SCN9AQ15858 1988 aa23.01■■□□□ 1.27
APH1A-201ENST00000236017 ANKRD18BA2A2Z9 1011 aa23■■□□□ 1.27
APH1A-201ENST00000236017 ZNF316A6NFI3 1004 aaPredicted RBP22.99■■□□□ 1.27
APH1A-201ENST00000236017 CCDC85CA6NKD9 419 aa22.99■■□□□ 1.27
APH1A-201ENST00000236017 KCNJ4P48050 445 aa22.99■■□□□ 1.27
APH1A-201ENST00000236017 TTLL5Q6EMB2 1281 aa22.99■■□□□ 1.27
APH1A-201ENST00000236017 TXNRD3Q86VQ6 643 aa22.99■■□□□ 1.27
APH1A-201ENST00000236017 SLC10A3P09131 477 aa22.98■■□□□ 1.27
APH1A-201ENST00000236017 REM2Q8IYK8 340 aaPredicted RBP22.98■■□□□ 1.27
APH1A-201ENST00000236017 MXD3Q9BW11 206 aa22.98■■□□□ 1.27
APH1A-201ENST00000236017 SAGE1Q9NXZ1 904 aa22.98■■□□□ 1.27
APH1A-201ENST00000236017 CHRNDQ07001 517 aa22.97■■□□□ 1.27
APH1A-201ENST00000236017 NBPF9Q3BBW0 867 aa22.97■■□□□ 1.27
APH1A-201ENST00000236017 MCOLN1Q9GZU1 580 aa22.97■■□□□ 1.27
APH1A-201ENST00000236017 HDAC9Q9UKV0 1011 aa22.97■■□□□ 1.27
APH1A-201ENST00000236017 POLR2AP24928 1970 aaKnown RBP22.96■■□□□ 1.27
APH1A-201ENST00000236017 IFIT5Q13325 482 aaKnown RBP22.96■■□□□ 1.27
APH1A-201ENST00000236017 F6X3S4 739 aa22.95■■□□□ 1.26
APH1A-201ENST00000236017 WNT10BO00744 389 aa22.95■■□□□ 1.26
APH1A-201ENST00000236017 DGKZQ13574 1117 aa22.95■■□□□ 1.26
APH1A-201ENST00000236017 BEND3Q5T5X7 828 aa22.95■■□□□ 1.26
APH1A-201ENST00000236017 CSRNP1Q96S65 589 aa22.95■■□□□ 1.26
APH1A-201ENST00000236017 RNF186Q9NXI6 227 aa22.95■■□□□ 1.26
APH1A-201ENST00000236017 CHMP3Q9Y3E7 222 aa22.95■■□□□ 1.26
APH1A-201ENST00000236017 TRPA1O75762 1119 aa22.94■■□□□ 1.26
APH1A-201ENST00000236017 NF2P35240 595 aa22.94■■□□□ 1.26
APH1A-201ENST00000236017 GTF2IP78347 998 aa22.94■■□□□ 1.26
APH1A-201ENST00000236017 CD209Q9NNX6 404 aa22.94■■□□□ 1.26
APH1A-201ENST00000236017 SCAF8Q9UPN6 1271 aaKnown RBP22.94■■□□□ 1.26
APH1A-201ENST00000236017 KLRK1P26718 216 aa22.93■■□□□ 1.26
APH1A-201ENST00000236017 FOXO4P98177 505 aa22.93■■□□□ 1.26
APH1A-201ENST00000236017 RASAL3Q86YV0 1011 aa22.93■■□□□ 1.26
APH1A-201ENST00000236017 TTLL12Q14166 644 aaPredicted RBP22.92■■□□□ 1.26
APH1A-201ENST00000236017 PRAMEF18Q5VWM3 479 aa22.92■■□□□ 1.26
APH1A-201ENST00000236017 KIAA0825Q8IV33 1275 aa22.92■■□□□ 1.26
APH1A-201ENST00000236017 FAM9BQ8IZU0 186 aa22.92■■□□□ 1.26
APH1A-201ENST00000236017 SPINK5Q9NQ38 1064 aaPredicted RBP22.92■■□□□ 1.26
APH1A-201ENST00000236017 UBE2Q2LH0YL09 131 aa22.91■■□□□ 1.26
APH1A-201ENST00000236017 TAF5LO75529 589 aa22.91■■□□□ 1.26
APH1A-201ENST00000236017 CCDC57Q2TAC2 916 aa22.91■■□□□ 1.26
APH1A-201ENST00000236017 LMBR1LQ6UX01 489 aa22.91■■□□□ 1.26
APH1A-201ENST00000236017 C15orf52Q6ZUT6 534 aaKnown RBP22.91■■□□□ 1.26
APH1A-201ENST00000236017 MYH3P11055 1940 aa22.9■■□□□ 1.26
APH1A-201ENST00000236017 SASH1O94885 1247 aa22.9■■□□□ 1.26
APH1A-201ENST00000236017 TAF7LQ5H9L4 462 aa22.9■■□□□ 1.26
APH1A-201ENST00000236017 MOB2Q70IA6 237 aa22.9■■□□□ 1.26
APH1A-201ENST00000236017 APOBEC3FQ8IUX4 373 aaKnown RBP22.9■■□□□ 1.26
APH1A-201ENST00000236017 HELBQ8NG08 1087 aaPredicted RBP22.9■■□□□ 1.26
APH1A-201ENST00000236017 C9orf78Q9NZ63 289 aaPredicted RBP22.9■■□□□ 1.26
APH1A-201ENST00000236017 GRM8O00222 908 aa22.89■■□□□ 1.25
APH1A-201ENST00000236017 PSME4Q14997 1843 aa22.89■■□□□ 1.25
APH1A-201ENST00000236017 SNAP23O00161 211 aa22.88■■□□□ 1.25
APH1A-201ENST00000236017 ALDH1L1O75891 902 aa22.88■■□□□ 1.25
APH1A-201ENST00000236017 RGS19P49795 217 aa22.88■■□□□ 1.25
APH1A-201ENST00000236017 LDHAL6AQ6ZMR3 332 aa22.88■■□□□ 1.25
APH1A-201ENST00000236017 ARMC9Q7Z3E5 817 aa22.88■■□□□ 1.25
APH1A-201ENST00000236017 ZNF804AQ7Z570 1209 aa22.88■■□□□ 1.25
APH1A-201ENST00000236017 DLGAP5Q15398 846 aa22.87■■□□□ 1.25
APH1A-201ENST00000236017 SLC4A10Q6U841 1118 aa22.87■■□□□ 1.25
APH1A-201ENST00000236017 ZBED3Q96IU2 234 aaPredicted RBP22.87■■□□□ 1.25
APH1A-201ENST00000236017 SRCIN1Q9C0H9 1055 aa22.87■■□□□ 1.25
APH1A-201ENST00000236017 CNNM1Q9NRU3 951 aa22.87■■□□□ 1.25
APH1A-201ENST00000236017 CASP8AP2Q9UKL3 1982 aa22.87■■□□□ 1.25
APH1A-201ENST00000236017 IL1R1P14778 569 aa22.86■■□□□ 1.25
APH1A-201ENST00000236017 MLLT1Q03111 559 aaPredicted RBP22.86■■□□□ 1.25
APH1A-201ENST00000236017 EPHA10Q5JZY3 1008 aa22.86■■□□□ 1.25
APH1A-201ENST00000236017 PAPPA2Q9BXP8 1791 aa22.86■■□□□ 1.25
APH1A-201ENST00000236017 IRS2Q9Y4H2 1338 aa22.85■■□□□ 1.25
APH1A-201ENST00000236017 PLIN1O60240 522 aa22.85■■□□□ 1.25
APH1A-201ENST00000236017 ZNF594Q96JF6 807 aaPredicted RBP22.85■■□□□ 1.25
APH1A-201ENST00000236017 CACNA1FO60840 1977 aa22.85■■□□□ 1.25
APH1A-201ENST00000236017 FKBP1AP62942 108 aaKnown RBP22.84■■□□□ 1.25
APH1A-201ENST00000236017 MTMR14Q8NCE2 650 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms