RNA–Protein interactions for RNA: ENST00000233575.6

SNX17-201, Transcript of sorting nexin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX17, Length 2,044 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-201ENST00000233575 RBM25P49756 843 aaKnown RBP22.52■■□□□ 1.2
SNX17-201ENST00000233575 SLFNL1Q499Z3 407 aa22.52■■□□□ 1.2
SNX17-201ENST00000233575 ZNF512BQ96KM6 892 aaPredicted RBP22.52■■□□□ 1.2
SNX17-201ENST00000233575 A0A0D9SFI3 127 aa22.52■■□□□ 1.19
SNX17-201ENST00000233575 GYG1P46976 350 aa22.52■■□□□ 1.19
SNX17-201ENST00000233575 ANKRD2Q9GZV1 360 aa22.52■■□□□ 1.19
SNX17-201ENST00000233575 CRAMP1Q96RY5 1269 aa22.51■■□□□ 1.19
SNX17-201ENST00000233575 ANO2Q9NQ90 1003 aa22.51■■□□□ 1.19
SNX17-201ENST00000233575 RASGRF1Q13972 1273 aa22.5■■□□□ 1.19
SNX17-201ENST00000233575 PDE6BP35913 854 aa22.5■■□□□ 1.19
SNX17-201ENST00000233575 HMG20BQ9P0W2 317 aa22.5■■□□□ 1.19
SNX17-201ENST00000233575 KCNJ4P48050 445 aa22.49■■□□□ 1.19
SNX17-201ENST00000233575 ANKIB1Q9P2G1 1089 aa22.49■■□□□ 1.19
SNX17-201ENST00000233575 IQSEC3Q9UPP2 1182 aaPredicted RBP22.49■■□□□ 1.19
SNX17-201ENST00000233575 MYO5AQ9Y4I1 1855 aaKnown RBP22.49■■□□□ 1.19
SNX17-201ENST00000233575 CYP2E1P05181 493 aaPredicted RBP22.48■■□□□ 1.19
SNX17-201ENST00000233575 UQCRFS1P1P0C7P4 283 aa22.48■■□□□ 1.19
SNX17-201ENST00000233575 ZNF804BA4D1E1 1349 aa22.48■■□□□ 1.19
SNX17-201ENST00000233575 HIP1O00291 1037 aa22.48■■□□□ 1.19
SNX17-201ENST00000233575 BBOX1O75936 387 aa22.48■■□□□ 1.19
SNX17-201ENST00000233575 NPR1P16066 1061 aa22.48■■□□□ 1.19
SNX17-201ENST00000233575 GPSM2P81274 684 aa22.48■■□□□ 1.19
SNX17-201ENST00000233575 TXNRD3Q86VQ6 643 aa22.48■■□□□ 1.19
SNX17-201ENST00000233575 FAM84BQ96KN1 310 aaPredicted RBP22.48■■□□□ 1.19
SNX17-201ENST00000233575 KIF2CQ99661 725 aa22.48■■□□□ 1.19
SNX17-201ENST00000233575 RFX7Q2KHR2 1363 aa22.47■■□□□ 1.19
SNX17-201ENST00000233575 EIF5BO60841 1220 aaKnown RBP22.47■■□□□ 1.19
SNX17-201ENST00000233575 SEC62Q99442 399 aaKnown RBP22.47■■□□□ 1.19
SNX17-201ENST00000233575 CACNA1SQ13698 1873 aa22.47■■□□□ 1.19
SNX17-201ENST00000233575 GOLGB1Q14789 3259 aaKnown RBP22.47■■□□□ 1.19
SNX17-201ENST00000233575 SPATA5Q8NB90 893 aa22.47■■□□□ 1.19
SNX17-201ENST00000233575 RUFY2Q8WXA3 655 aa22.47■■□□□ 1.19
SNX17-201ENST00000233575 GPR101Q96P66 508 aaPredicted RBP22.47■■□□□ 1.19
SNX17-201ENST00000233575 PIH1D3Q9NQM4 214 aaKnown RBP22.47■■□□□ 1.19
SNX17-201ENST00000233575 XDHP47989 1333 aa22.46■■□□□ 1.19
SNX17-201ENST00000233575 IRS2Q9Y4H2 1338 aa22.46■■□□□ 1.19
SNX17-201ENST00000233575 LRRC37AA6NMS7 1700 aa22.46■■□□□ 1.19
SNX17-201ENST00000233575 PPEF1O14829 653 aaPredicted RBP22.46■■□□□ 1.19
SNX17-201ENST00000233575 ZBTB7AO95365 584 aa22.46■■□□□ 1.19
SNX17-201ENST00000233575 OLFM4Q6UX06 510 aa22.46■■□□□ 1.19
SNX17-201ENST00000233575 ZNF589Q86UQ0 364 aaPredicted RBP22.46■■□□□ 1.19
SNX17-201ENST00000233575 C2CD5Q86YS7 1000 aa22.46■■□□□ 1.19
SNX17-201ENST00000233575 LSG1Q9H089 658 aaKnown RBP22.46■■□□□ 1.19
SNX17-201ENST00000233575 NSFL1CQ9UNZ2 370 aaKnown RBP22.46■■□□□ 1.19
SNX17-201ENST00000233575 CHRNA5P30532 468 aa22.45■■□□□ 1.18
SNX17-201ENST00000233575 SLC16A10Q8TF71 515 aa22.45■■□□□ 1.18
SNX17-201ENST00000233575 MASTLQ96GX5 879 aa22.45■■□□□ 1.18
SNX17-201ENST00000233575 COL1A1P02452 1464 aaPredicted RBP22.45■■□□□ 1.18
SNX17-201ENST00000233575 MED23Q9ULK4 1368 aa22.45■■□□□ 1.18
SNX17-201ENST00000233575 ZNF622Q969S3 477 aaKnown RBP eCLIP22.45■■□□□ 1.18
SNX17-201ENST00000233575 PTH1RQ03431 593 aa22.44■■□□□ 1.18
SNX17-201ENST00000233575 CAVIN4Q5BKX8 364 aa22.44■■□□□ 1.18
SNX17-201ENST00000233575 CCDC129Q6ZRS4 1044 aa22.44■■□□□ 1.18
SNX17-201ENST00000233575 IPO9Q96P70 1041 aaKnown RBP22.44■■□□□ 1.18
SNX17-201ENST00000233575 R3HDM1Q15032 1099 aaKnown RBP22.43■■□□□ 1.18
SNX17-201ENST00000233575 FBXO33Q7Z6M2 555 aa22.43■■□□□ 1.18
SNX17-201ENST00000233575 MYH7P12883 1935 aa22.43■■□□□ 1.18
SNX17-201ENST00000233575 VPS37DQ86XT2 251 aa22.43■■□□□ 1.18
SNX17-201ENST00000233575 LEMD3Q9Y2U8 911 aa22.43■■□□□ 1.18
SNX17-201ENST00000233575 LTBP1Q14766 1721 aa22.43■■□□□ 1.18
SNX17-201ENST00000233575 RAD50Q92878 1312 aa22.42■■□□□ 1.18
SNX17-201ENST00000233575 H0YIN7 160 aa22.42■■□□□ 1.18
SNX17-201ENST00000233575 RNF113AO15541 343 aaKnown RBP22.42■■□□□ 1.18
SNX17-201ENST00000233575 PALD1Q9ULE6 856 aa22.42■■□□□ 1.18
SNX17-201ENST00000233575 ATP6V0A2Q9Y487 856 aa22.42■■□□□ 1.18
SNX17-201ENST00000233575 C10orf71Q711Q0 1435 aa22.42■■□□□ 1.18
SNX17-201ENST00000233575 UFL1O94874 794 aa22.41■■□□□ 1.18
SNX17-201ENST00000233575 ALDH1B1P30837 517 aa22.41■■□□□ 1.18
SNX17-201ENST00000233575 SP8Q8IXZ3 490 aa22.41■■□□□ 1.18
SNX17-201ENST00000233575 IDH1O75874 414 aaKnown RBP22.41■■□□□ 1.18
SNX17-201ENST00000233575 HIBADHP31937 336 aaKnown RBP22.41■■□□□ 1.18
SNX17-201ENST00000233575 ZMYM1Q5SVZ6 1142 aa22.41■■□□□ 1.18
SNX17-201ENST00000233575 KIAA1211Q6ZU35 1233 aa22.41■■□□□ 1.18
SNX17-201ENST00000233575 POLLQ9UGP5 575 aa22.41■■□□□ 1.18
SNX17-201ENST00000233575 ATF5Q9Y2D1 282 aaPredicted RBP22.41■■□□□ 1.18
SNX17-201ENST00000233575 DOCK2Q92608 1830 aa22.41■■□□□ 1.18
SNX17-201ENST00000233575 TTF1Q15361 905 aaPredicted RBP22.4■■□□□ 1.18
SNX17-201ENST00000233575 GNL3LQ9NVN8 582 aaKnown RBP22.4■■□□□ 1.18
SNX17-201ENST00000233575 CCDC171Q6TFL3 1326 aa22.4■■□□□ 1.18
SNX17-201ENST00000233575 SLX4Q8IY92 1834 aa22.4■■□□□ 1.18
SNX17-201ENST00000233575 MCMDC2Q4G0Z9 681 aa22.4■■□□□ 1.18
SNX17-201ENST00000233575 PODXL2Q9NZ53 605 aa22.4■■□□□ 1.18
SNX17-201ENST00000233575 GGA1Q9UJY5 639 aa22.4■■□□□ 1.18
SNX17-201ENST00000233575 WWC3Q9ULE0 1092 aa22.4■■□□□ 1.18
SNX17-201ENST00000233575 MYH13Q9UKX3 1938 aa22.39■■□□□ 1.17
SNX17-201ENST00000233575 TMC4Q7Z404 712 aa22.39■■□□□ 1.17
SNX17-201ENST00000233575 TBC1D16Q8TBP0 767 aa22.39■■□□□ 1.17
SNX17-201ENST00000233575 OSBP2Q969R2 916 aa22.39■■□□□ 1.17
SNX17-201ENST00000233575 MAST3O60307 1309 aa22.39■■□□□ 1.17
SNX17-201ENST00000233575 PSDA5PKW4 1024 aaPredicted RBP22.38■■□□□ 1.17
SNX17-201ENST00000233575 M0R2C6 588 aa22.38■■□□□ 1.17
SNX17-201ENST00000233575 SLC4A3P48751 1232 aa22.38■■□□□ 1.17
SNX17-201ENST00000233575 STYK1Q6J9G0 422 aa22.38■■□□□ 1.17
SNX17-201ENST00000233575 DUOX1Q9NRD9 1551 aa22.38■■□□□ 1.17
SNX17-201ENST00000233575 ATP2B4P23634 1241 aa22.38■■□□□ 1.17
SNX17-201ENST00000233575 HSPA4P34932 840 aa22.38■■□□□ 1.17
SNX17-201ENST00000233575 SLC9C2Q5TAH2 1124 aa22.38■■□□□ 1.17
SNX17-201ENST00000233575 PRPF40BQ6NWY9 871 aaKnown RBP22.38■■□□□ 1.17
SNX17-201ENST00000233575 DDRGK1Q96HY6 314 aa22.38■■□□□ 1.17
SNX17-201ENST00000233575 HELLSQ9NRZ9 838 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms