RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 PI4KAP2A4QPH2 592 aa15.71■□□□□ 0.1
HCFC2-201ENST00000229330 NDUFAB1O14561 156 aa15.71■□□□□ 0.1
HCFC2-201ENST00000229330 ERCC6LQ2NKX8 1250 aa15.71■□□□□ 0.1
HCFC2-201ENST00000229330 PI4KAP1Q8N8J0 262 aa15.71■□□□□ 0.1
HCFC2-201ENST00000229330 DMRT2Q9Y5R5 561 aa15.71■□□□□ 0.1
HCFC2-201ENST00000229330 CPA1P15085 419 aa15.7■□□□□ 0.1
HCFC2-201ENST00000229330 METTL24Q5JXM2 366 aa15.7■□□□□ 0.1
HCFC2-201ENST00000229330 CPLX4Q7Z7G2 160 aa15.7■□□□□ 0.1
HCFC2-201ENST00000229330 TMOD3Q9NYL9 352 aa15.7■□□□□ 0.1
HCFC2-201ENST00000229330 MAP3K2Q9Y2U5 619 aa15.7■□□□□ 0.1
HCFC2-201ENST00000229330 COL17A1Q9UMD9 1497 aaPredicted RBP15.7■□□□□ 0.1
HCFC2-201ENST00000229330 CCDC85AQ96PX6 553 aaPredicted RBP15.7■□□□□ 0.1
HCFC2-201ENST00000229330 CETN2P41208 172 aa15.7■□□□□ 0.1
HCFC2-201ENST00000229330 NLRP5P59047 1200 aa15.7■□□□□ 0.1
HCFC2-201ENST00000229330 IFI16Q16666 785 aaKnown RBP15.7■□□□□ 0.1
HCFC2-201ENST00000229330 SAMD9Q5K651 1589 aa15.7■□□□□ 0.1
HCFC2-201ENST00000229330 PTPDC1A2A3K4 754 aa15.7■□□□□ 0.1
HCFC2-201ENST00000229330 PRPF4BQ13523 1007 aaKnown RBP15.7■□□□□ 0.1
HCFC2-201ENST00000229330 CNGA4Q8IV77 575 aa15.7■□□□□ 0.1
HCFC2-201ENST00000229330 NAPGQ99747 312 aaPredicted RBP15.7■□□□□ 0.1
HCFC2-201ENST00000229330 A0A1B0GVL5 298 aa15.69■□□□□ 0.1
HCFC2-201ENST00000229330 A6NNZ2 444 aa15.69■□□□□ 0.1
HCFC2-201ENST00000229330 TUBB8Q3ZCM7 444 aa15.69■□□□□ 0.1
HCFC2-201ENST00000229330 CFAP58Q5T655 872 aa15.69■□□□□ 0.1
HCFC2-201ENST00000229330 GPR161Q8N6U8 529 aaKnown RBP15.69■□□□□ 0.1
HCFC2-201ENST00000229330 FANCCQ00597 558 aa15.69■□□□□ 0.1
HCFC2-201ENST00000229330 PYCARDQ9ULZ3 195 aa15.69■□□□□ 0.1
HCFC2-201ENST00000229330 RAD50Q92878 1312 aa15.69■□□□□ 0.1
HCFC2-201ENST00000229330 GOLGA6CA6NDK9 693 aa15.69■□□□□ 0.1
HCFC2-201ENST00000229330 MINDY4BA8MYZ0 360 aa15.69■□□□□ 0.1
HCFC2-201ENST00000229330 GOLGA6DP0CG33 693 aa15.69■□□□□ 0.1
HCFC2-201ENST00000229330 GOLGA6AQ9NYA3 693 aa15.69■□□□□ 0.1
HCFC2-201ENST00000229330 LRMPQ12912 555 aa15.69■□□□□ 0.1
HCFC2-201ENST00000229330 PKP1Q13835 747 aa15.69■□□□□ 0.1
HCFC2-201ENST00000229330 MCMDC2Q4G0Z9 681 aa15.69■□□□□ 0.1
HCFC2-201ENST00000229330 PAXIP1Q6ZW49 1069 aaPredicted RBP15.69■□□□□ 0.1
HCFC2-201ENST00000229330 LEO1Q8WVC0 666 aaPredicted RBP15.69■□□□□ 0.1
HCFC2-201ENST00000229330 AMPD3Q01432 767 aa15.69■□□□□ 0.1
HCFC2-201ENST00000229330 CCDC6Q16204 474 aa15.69■□□□□ 0.1
HCFC2-201ENST00000229330 CCDC194A0A1B0GVG4 234 aa15.68■□□□□ 0.1
HCFC2-201ENST00000229330 CCDC40Q4G0X9 1142 aa15.68■□□□□ 0.1
HCFC2-201ENST00000229330 FAM173BQ6P4H8 233 aa15.68■□□□□ 0.1
HCFC2-201ENST00000229330 BRAPQ7Z569 592 aa15.68■□□□□ 0.1
HCFC2-201ENST00000229330 KLHL34Q8N239 644 aa15.68■□□□□ 0.1
HCFC2-201ENST00000229330 RNF41Q9H4P4 317 aaPredicted RBP15.68■□□□□ 0.1
HCFC2-201ENST00000229330 SNX14Q9Y5W7 946 aa15.68■□□□□ 0.1
HCFC2-201ENST00000229330 TTC21AQ8NDW8 1320 aa15.68■□□□□ 0.1
HCFC2-201ENST00000229330 SARNPP82979 210 aaKnown RBP15.68■□□□□ 0.1
HCFC2-201ENST00000229330 FBF1Q8TES7 1133 aa15.68■□□□□ 0.1
HCFC2-201ENST00000229330 ERBB4Q15303 1308 aa15.68■□□□□ 0.1
HCFC2-201ENST00000229330 ADGRL2O95490 1459 aa15.68■□□□□ 0.1
HCFC2-201ENST00000229330 ARHGAP6O43182 974 aa15.68■□□□□ 0.1
HCFC2-201ENST00000229330 SSR1P43307 286 aaKnown RBP15.68■□□□□ 0.1
HCFC2-201ENST00000229330 CLNS1AP54105 237 aaKnown RBP15.68■□□□□ 0.1
HCFC2-201ENST00000229330 ELP1O95163 1332 aa15.68■□□□□ 0.1
HCFC2-201ENST00000229330 BMP15O95972 392 aa15.67■□□□□ 0.1
HCFC2-201ENST00000229330 DDX46Q7L014 1031 aaKnown RBP15.67■□□□□ 0.1
HCFC2-201ENST00000229330 UBA7P41226 1012 aa15.67■□□□□ 0.1
HCFC2-201ENST00000229330 GOLGA5Q8TBA6 731 aa15.67■□□□□ 0.1
HCFC2-201ENST00000229330 CPSF2Q9P2I0 782 aaKnown RBP15.67■□□□□ 0.1
HCFC2-201ENST00000229330 KIF4AO95239 1232 aa15.67■□□□□ 0.1
HCFC2-201ENST00000229330 PUS7Q96PZ0 661 aaKnown RBP15.67■□□□□ 0.1
HCFC2-201ENST00000229330 KIF5BP33176 963 aa15.67■□□□□ 0.1
HCFC2-201ENST00000229330 ARHGAP25P42331 645 aa15.67■□□□□ 0.1
HCFC2-201ENST00000229330 BRD3Q15059 726 aa15.67■□□□□ 0.1
HCFC2-201ENST00000229330 C6orf163Q5TEZ5 329 aa15.67■□□□□ 0.1
HCFC2-201ENST00000229330 SELENOOQ9BVL4 669 aa15.67■□□□□ 0.1
HCFC2-201ENST00000229330 CARD14Q9BXL6 1004 aa15.67■□□□□ 0.1
HCFC2-201ENST00000229330 RAB34Q9BZG1 259 aa15.67■□□□□ 0.1
HCFC2-201ENST00000229330 TTF2Q9UNY4 1162 aaKnown RBP15.67■□□□□ 0.1
HCFC2-201ENST00000229330 KIAA0753Q2KHM9 967 aa15.66■□□□□ 0.1
HCFC2-201ENST00000229330 IQCA1Q86XH1 822 aa15.66■□□□□ 0.1
HCFC2-201ENST00000229330 TCP11L1Q9NUJ3 509 aa15.66■□□□□ 0.1
HCFC2-201ENST00000229330 CADPS2Q86UW7 1296 aa15.66■□□□□ 0.1
HCFC2-201ENST00000229330 IFT81Q8WYA0 676 aa15.66■□□□□ 0.1
HCFC2-201ENST00000229330 CATIPQ7Z7H3 387 aa15.66■□□□□ 0.1
HCFC2-201ENST00000229330 CCDC42Q96M95 316 aa15.66■□□□□ 0.1
HCFC2-201ENST00000229330 STX17P56962 302 aa15.66■□□□□ 0.1
HCFC2-201ENST00000229330 APOBRQ0VD83 1088 aa15.66■□□□□ 0.1
HCFC2-201ENST00000229330 CCDC50Q8IVM0 306 aa15.66■□□□□ 0.1
HCFC2-201ENST00000229330 A0A087WZG4 1122 aa15.65■□□□□ 0.1
HCFC2-201ENST00000229330 ZBTB43O43298 467 aa15.65■□□□□ 0.1
HCFC2-201ENST00000229330 MAP3K12Q12852 859 aa15.65■□□□□ 0.1
HCFC2-201ENST00000229330 STMN4Q9H169 189 aaPredicted RBP15.65■□□□□ 0.1
HCFC2-201ENST00000229330 NPC1L1Q9UHC9 1359 aa15.65■□□□□ 0.1
HCFC2-201ENST00000229330 CEP170Q5SW79 1584 aa15.65■□□□□ 0.1
HCFC2-201ENST00000229330 UHRF1BP1Q6BDS2 1440 aa15.65■□□□□ 0.1
HCFC2-201ENST00000229330 ZRANB1Q9UGI0 708 aa15.65■□□□□ 0.1
HCFC2-201ENST00000229330 SOS1Q07889 1333 aaPredicted RBP15.65■□□□□ 0.1
HCFC2-201ENST00000229330 TMEM266Q2M3C6 531 aa15.65■□□□□ 0.1
HCFC2-201ENST00000229330 CCDC122Q5T0U0 273 aa15.65■□□□□ 0.1
HCFC2-201ENST00000229330 DHX58Q96C10 678 aa15.65■□□□□ 0.1
HCFC2-201ENST00000229330 UBXN1Q04323 297 aa15.65■□□□□ 0.1
HCFC2-201ENST00000229330 CTNNBL1Q8WYA6 563 aaPredicted RBP15.65■□□□□ 0.1
HCFC2-201ENST00000229330 ATP2B2Q01814 1243 aa15.65■□□□□ 0.1
HCFC2-201ENST00000229330 SELENOSQ9BQE4 189 aa15.65■□□□□ 0.1
HCFC2-201ENST00000229330 POLKQ9UBT6 870 aa15.65■□□□□ 0.1
HCFC2-201ENST00000229330 RANBP6O60518 1105 aaKnown RBP15.64■□□□□ 0.09
HCFC2-201ENST00000229330 LRRC8AQ8IWT6 810 aa15.64■□□□□ 0.09
HCFC2-201ENST00000229330 CALML4Q96GE6 196 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms