RNA–Protein interactions for RNA: ENST00000226225.6

TNFAIP1-201, Transcript of TNF alpha induced protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP1, Length 3,627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-201ENST00000226225 NMIQ13287 307 aaPredicted RBP13.96□□□□□ -0.17
TNFAIP1-201ENST00000226225 PLA2G12BQ9BX93 195 aa13.96□□□□□ -0.17
TNFAIP1-201ENST00000226225 NSFL1CQ9UNZ2 370 aaKnown RBP13.96□□□□□ -0.17
TNFAIP1-201ENST00000226225 NEK4P51957 841 aa13.96□□□□□ -0.17
TNFAIP1-201ENST00000226225 CHAF1AQ13111 956 aaPredicted RBP13.96□□□□□ -0.17
TNFAIP1-201ENST00000226225 SLFNL1Q499Z3 407 aa13.96□□□□□ -0.17
TNFAIP1-201ENST00000226225 GDPD2Q9HCC8 539 aa13.96□□□□□ -0.17
TNFAIP1-201ENST00000226225 TAOK2Q9UL54 1235 aa13.96□□□□□ -0.17
TNFAIP1-201ENST00000226225 ITGB4P16144 1822 aa13.96□□□□□ -0.17
TNFAIP1-201ENST00000226225 CIAO1O76071 339 aa13.96□□□□□ -0.18
TNFAIP1-201ENST00000226225 CHGBP05060 677 aa13.96□□□□□ -0.18
TNFAIP1-201ENST00000226225 BAG6P46379 1132 aa13.96□□□□□ -0.18
TNFAIP1-201ENST00000226225 FGD1P98174 961 aa13.96□□□□□ -0.18
TNFAIP1-201ENST00000226225 CHRNDQ07001 517 aa13.96□□□□□ -0.18
TNFAIP1-201ENST00000226225 ZNF622Q969S3 477 aaKnown RBP eCLIP13.96□□□□□ -0.18
TNFAIP1-201ENST00000226225 STK32BQ9NY57 414 aa13.96□□□□□ -0.18
TNFAIP1-201ENST00000226225 ATP5JP18859 108 aa13.95□□□□□ -0.18
TNFAIP1-201ENST00000226225 PUM3Q15397 648 aaKnown RBP13.95□□□□□ -0.18
TNFAIP1-201ENST00000226225 FBXW7Q969H0 707 aa13.95□□□□□ -0.18
TNFAIP1-201ENST00000226225 USP26Q9BXU7 913 aa13.95□□□□□ -0.18
TNFAIP1-201ENST00000226225 NAP1L2Q9ULW6 460 aaPredicted RBP13.95□□□□□ -0.18
TNFAIP1-201ENST00000226225 RIPOR2Q9Y4F9 1068 aa13.95□□□□□ -0.18
TNFAIP1-201ENST00000226225 G3V3G9 751 aa13.95□□□□□ -0.18
TNFAIP1-201ENST00000226225 GYS1P13807 737 aa13.95□□□□□ -0.18
TNFAIP1-201ENST00000226225 ZAP70P43403 619 aa13.95□□□□□ -0.18
TNFAIP1-201ENST00000226225 PHKA1P46020 1223 aa13.95□□□□□ -0.18
TNFAIP1-201ENST00000226225 DCAF8Q5TAQ9 597 aa13.95□□□□□ -0.18
TNFAIP1-201ENST00000226225 CCDC129Q6ZRS4 1044 aa13.95□□□□□ -0.18
TNFAIP1-201ENST00000226225 C17orf53Q8N3J3 647 aaPredicted RBP13.95□□□□□ -0.18
TNFAIP1-201ENST00000226225 PPP1R9BQ96SB3 815 aa13.95□□□□□ -0.18
TNFAIP1-201ENST00000226225 PODXL2Q9NZ53 605 aa13.95□□□□□ -0.18
TNFAIP1-201ENST00000226225 PARP3Q9Y6F1 533 aa13.95□□□□□ -0.18
TNFAIP1-201ENST00000226225 SHANK3Q9BYB0 1731 aa13.94□□□□□ -0.18
TNFAIP1-201ENST00000226225 AOX1Q06278 1338 aa13.94□□□□□ -0.18
TNFAIP1-201ENST00000226225 HIP1O00291 1037 aa13.94□□□□□ -0.18
TNFAIP1-201ENST00000226225 MMP10P09238 476 aa13.94□□□□□ -0.18
TNFAIP1-201ENST00000226225 BCAMP50895 628 aa13.94□□□□□ -0.18
TNFAIP1-201ENST00000226225 ZNF827Q17R98 1081 aa13.94□□□□□ -0.18
TNFAIP1-201ENST00000226225 SEC62Q99442 399 aaKnown RBP13.94□□□□□ -0.18
TNFAIP1-201ENST00000226225 SALL3Q9BXA9 1300 aa13.94□□□□□ -0.18
TNFAIP1-201ENST00000226225 ADRA2BP18089 450 aa13.94□□□□□ -0.18
TNFAIP1-201ENST00000226225 CAVIN4Q5BKX8 364 aa13.94□□□□□ -0.18
TNFAIP1-201ENST00000226225 PRPF40BQ6NWY9 871 aaKnown RBP13.94□□□□□ -0.18
TNFAIP1-201ENST00000226225 LRP2BPQ9P2M1 347 aa13.94□□□□□ -0.18
TNFAIP1-201ENST00000226225 COL23A1Q86Y22 540 aaPredicted RBP13.94□□□□□ -0.18
TNFAIP1-201ENST00000226225 LPIN2Q92539 896 aa13.94□□□□□ -0.18
TNFAIP1-201ENST00000226225 ST18O60284 1047 aa13.93□□□□□ -0.18
TNFAIP1-201ENST00000226225 ZKSCAN1P17029 563 aaPredicted RBP13.93□□□□□ -0.18
TNFAIP1-201ENST00000226225 GYG1P46976 350 aa13.93□□□□□ -0.18
TNFAIP1-201ENST00000226225 NLGN1Q8N2Q7 840 aa13.93□□□□□ -0.18
TNFAIP1-201ENST00000226225 C6orf229H3BNL8 230 aa13.93□□□□□ -0.18
TNFAIP1-201ENST00000226225 HMGB2P26583 209 aaKnown RBP13.93□□□□□ -0.18
TNFAIP1-201ENST00000226225 CCDC102BQ68D86 513 aa13.93□□□□□ -0.18
TNFAIP1-201ENST00000226225 GPT2Q8TD30 523 aa13.93□□□□□ -0.18
TNFAIP1-201ENST00000226225 LARP6Q9BRS8 491 aaKnown RBP13.93□□□□□ -0.18
TNFAIP1-201ENST00000226225 MROH5Q6ZUA9 1318 aa13.93□□□□□ -0.18
TNFAIP1-201ENST00000226225 LMBRD1Q9NUN5 540 aa13.92□□□□□ -0.18
TNFAIP1-201ENST00000226225 A0A0D9SFI3 127 aa13.92□□□□□ -0.18
TNFAIP1-201ENST00000226225 WTIPA6NIX2 430 aaPredicted RBP13.92□□□□□ -0.18
TNFAIP1-201ENST00000226225 LRRFIP1Q32MZ4 808 aaKnown RBP13.92□□□□□ -0.18
TNFAIP1-201ENST00000226225 IL25Q9H293 177 aa13.92□□□□□ -0.18
TNFAIP1-201ENST00000226225 GNL3LQ9NVN8 582 aaKnown RBP13.92□□□□□ -0.18
TNFAIP1-201ENST00000226225 SCARF1Q14162 830 aa13.92□□□□□ -0.18
TNFAIP1-201ENST00000226225 PRR5LQ6MZQ0 368 aa13.92□□□□□ -0.18
TNFAIP1-201ENST00000226225 RAI14Q9P0K7 980 aa13.92□□□□□ -0.18
TNFAIP1-201ENST00000226225 PLSCR1O15162 318 aa13.91□□□□□ -0.18
TNFAIP1-201ENST00000226225 SGSM2O43147 1006 aa13.91□□□□□ -0.18
TNFAIP1-201ENST00000226225 PTMSP20962 102 aa13.91□□□□□ -0.18
TNFAIP1-201ENST00000226225 STK11IPQ8N1F8 1099 aa13.91□□□□□ -0.18
TNFAIP1-201ENST00000226225 TMEM63CQ9P1W3 806 aa13.91□□□□□ -0.18
TNFAIP1-201ENST00000226225 FBXO3Q9UK99 471 aa13.91□□□□□ -0.18
TNFAIP1-201ENST00000226225 SLC9C2Q5TAH2 1124 aa13.91□□□□□ -0.18
TNFAIP1-201ENST00000226225 HAUS7Q99871 368 aa13.91□□□□□ -0.18
TNFAIP1-201ENST00000226225 ABCC12Q96J65 1359 aa13.91□□□□□ -0.18
TNFAIP1-201ENST00000226225 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.91□□□□□ -0.18
TNFAIP1-201ENST00000226225 CARMIL3Q8ND23 1372 aa13.91□□□□□ -0.18
TNFAIP1-201ENST00000226225 KBTBD3Q8NAB2 608 aa13.9□□□□□ -0.18
TNFAIP1-201ENST00000226225 GPR101Q96P66 508 aaPredicted RBP13.9□□□□□ -0.18
TNFAIP1-201ENST00000226225 GPR108Q9NPR9 543 aa13.9□□□□□ -0.18
TNFAIP1-201ENST00000226225 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.9□□□□□ -0.18
TNFAIP1-201ENST00000226225 IGSF3O75054 1194 aa13.9□□□□□ -0.18
TNFAIP1-201ENST00000226225 NUCB2P80303 420 aa13.9□□□□□ -0.18
TNFAIP1-201ENST00000226225 CBX1P83916 185 aa13.9□□□□□ -0.18
TNFAIP1-201ENST00000226225 TOMM22Q9NS69 142 aa13.9□□□□□ -0.18
TNFAIP1-201ENST00000226225 MINPP1Q9UNW1 487 aa13.9□□□□□ -0.18
TNFAIP1-201ENST00000226225 PTH1RQ03431 593 aa13.89□□□□□ -0.19
TNFAIP1-201ENST00000226225 RABEP1Q15276 862 aa13.89□□□□□ -0.19
TNFAIP1-201ENST00000226225 NOL7Q9UMY1 257 aaKnown RBP13.89□□□□□ -0.19
TNFAIP1-201ENST00000226225 PALD1Q9ULE6 856 aa13.89□□□□□ -0.19
TNFAIP1-201ENST00000226225 UQCRFS1P1P0C7P4 283 aa13.89□□□□□ -0.19
TNFAIP1-201ENST00000226225 SF3B3Q15393 1217 aaKnown RBP13.89□□□□□ -0.19
TNFAIP1-201ENST00000226225 RNF20Q5VTR2 975 aa13.89□□□□□ -0.19
TNFAIP1-201ENST00000226225 FLAD1Q8NFF5 587 aa13.89□□□□□ -0.19
TNFAIP1-201ENST00000226225 JAKMIP1Q96N16 626 aaKnown RBP13.89□□□□□ -0.19
TNFAIP1-201ENST00000226225 RIMBP2O15034 1052 aa13.88□□□□□ -0.19
TNFAIP1-201ENST00000226225 CPA1P15085 419 aa13.88□□□□□ -0.19
TNFAIP1-201ENST00000226225 MCAMP43121 646 aa13.88□□□□□ -0.19
TNFAIP1-201ENST00000226225 BSDC1Q9NW68 430 aaPredicted RBP13.88□□□□□ -0.19
TNFAIP1-201ENST00000226225 ZKSCAN5Q9Y2L8 839 aa13.88□□□□□ -0.19
TNFAIP1-201ENST00000226225 MCMDC2Q4G0Z9 681 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms