RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 TCOF1Q13428 1488 aaKnown RBP21.15■□□□□ 0.98
CLIP2-201ENST00000223398 APOBRQ0VD83 1088 aa21.15■□□□□ 0.98
CLIP2-201ENST00000223398 TRIM47Q96LD4 638 aa21.15■□□□□ 0.98
CLIP2-201ENST00000223398 BIN2Q9UBW5 565 aaPredicted RBP21.15■□□□□ 0.98
CLIP2-201ENST00000223398 METTL22Q9BUU2 404 aaPredicted RBP21.15■□□□□ 0.98
CLIP2-201ENST00000223398 USP25Q9UHP3 1055 aa21.15■□□□□ 0.98
CLIP2-201ENST00000223398 HSP90AA4PQ58FG1 418 aa21.15■□□□□ 0.98
CLIP2-201ENST00000223398 DENND2AQ9ULE3 1009 aa21.15■□□□□ 0.98
CLIP2-201ENST00000223398 A0A1B0GUL7 405 aa21.15■□□□□ 0.98
CLIP2-201ENST00000223398 YEATS4O95619 227 aa21.15■□□□□ 0.98
CLIP2-201ENST00000223398 DPP8Q6V1X1 898 aaPredicted RBP21.15■□□□□ 0.98
CLIP2-201ENST00000223398 RBM27Q9P2N5 1060 aaKnown RBP21.15■□□□□ 0.98
CLIP2-201ENST00000223398 C6orf50Q9HD87 102 aa21.14■□□□□ 0.97
CLIP2-201ENST00000223398 SYKP43405 635 aa21.14■□□□□ 0.97
CLIP2-201ENST00000223398 TTC41PQ6P2S7 1318 aa21.14■□□□□ 0.97
CLIP2-201ENST00000223398 ARHGEF10O15013 1369 aa21.13■□□□□ 0.97
CLIP2-201ENST00000223398 PDE8AO60658 829 aa21.13■□□□□ 0.97
CLIP2-201ENST00000223398 GBP2P32456 591 aaPredicted RBP21.13■□□□□ 0.97
CLIP2-201ENST00000223398 ZYXQ15942 572 aaKnown RBP21.13■□□□□ 0.97
CLIP2-201ENST00000223398 RRAGBQ5VZM2 374 aa21.13■□□□□ 0.97
CLIP2-201ENST00000223398 TCHPQ9BT92 498 aa21.13■□□□□ 0.97
CLIP2-201ENST00000223398 PKD2L1Q9P0L9 805 aa21.13■□□□□ 0.97
CLIP2-201ENST00000223398 DISP1Q96F81 1524 aa21.13■□□□□ 0.97
CLIP2-201ENST00000223398 EDC4Q6P2E9 1401 aaKnown RBP21.13■□□□□ 0.97
CLIP2-201ENST00000223398 TMC6Q7Z403 805 aa21.13■□□□□ 0.97
CLIP2-201ENST00000223398 MAP7D2Q96T17 732 aa21.13■□□□□ 0.97
CLIP2-201ENST00000223398 EYA2O00167 538 aa21.13■□□□□ 0.97
CLIP2-201ENST00000223398 CTNNA2P26232 953 aa21.13■□□□□ 0.97
CLIP2-201ENST00000223398 STX1AQ16623 288 aa21.13■□□□□ 0.97
CLIP2-201ENST00000223398 KIF4BQ2VIQ3 1234 aa21.13■□□□□ 0.97
CLIP2-201ENST00000223398 SHANK2Q9UPX8 1470 aa21.12■□□□□ 0.97
CLIP2-201ENST00000223398 KIF5CO60282 957 aa21.12■□□□□ 0.97
CLIP2-201ENST00000223398 COL17A1Q9UMD9 1497 aaPredicted RBP21.12■□□□□ 0.97
CLIP2-201ENST00000223398 TTC6Q86TZ1 520 aa21.12■□□□□ 0.97
CLIP2-201ENST00000223398 ZSCAN16Q9H4T2 348 aaPredicted RBP21.12■□□□□ 0.97
CLIP2-201ENST00000223398 LRRC27Q9C0I9 530 aa21.12■□□□□ 0.97
CLIP2-201ENST00000223398 TRMT1Q9NXH9 659 aaKnown RBP21.12■□□□□ 0.97
CLIP2-201ENST00000223398 SOS1Q07889 1333 aaPredicted RBP21.12■□□□□ 0.97
CLIP2-201ENST00000223398 ZSCAN22P10073 491 aaPredicted RBP21.12■□□□□ 0.97
CLIP2-201ENST00000223398 BAG6P46379 1132 aa21.12■□□□□ 0.97
CLIP2-201ENST00000223398 ZRSR2Q15696 482 aaKnown RBP21.12■□□□□ 0.97
CLIP2-201ENST00000223398 TMEM2Q9UHN6 1383 aa21.12■□□□□ 0.97
CLIP2-201ENST00000223398 ZSCAN12O43309 604 aa21.11■□□□□ 0.97
CLIP2-201ENST00000223398 CCDC129Q6ZRS4 1044 aa21.11■□□□□ 0.97
CLIP2-201ENST00000223398 TBC1D32Q96NH3 1257 aa21.11■□□□□ 0.97
CLIP2-201ENST00000223398 ARMT1Q9H993 441 aa21.11■□□□□ 0.97
CLIP2-201ENST00000223398 KANK3Q6NY19 840 aa21.11■□□□□ 0.97
CLIP2-201ENST00000223398 ZNF496Q96IT1 587 aaPredicted RBP21.11■□□□□ 0.97
CLIP2-201ENST00000223398 DCTPP1Q9H773 170 aa21.11■□□□□ 0.97
CLIP2-201ENST00000223398 GPCPD1Q9NPB8 672 aa21.11■□□□□ 0.97
CLIP2-201ENST00000223398 PYM1Q9BRP8 204 aaKnown RBP21.11■□□□□ 0.97
CLIP2-201ENST00000223398 TMCO5BA8MYB1 307 aa21.1■□□□□ 0.97
CLIP2-201ENST00000223398 PUM3Q15397 648 aaKnown RBP21.1■□□□□ 0.97
CLIP2-201ENST00000223398 CCDC191Q8NCU4 936 aa21.1■□□□□ 0.97
CLIP2-201ENST00000223398 RTL9Q8NET4 1388 aa21.1■□□□□ 0.97
CLIP2-201ENST00000223398 PHACTR2O75167 634 aa21.1■□□□□ 0.97
CLIP2-201ENST00000223398 CNPY2Q9Y2B0 182 aa21.1■□□□□ 0.97
CLIP2-201ENST00000223398 CEP170Q5SW79 1584 aa21.1■□□□□ 0.97
CLIP2-201ENST00000223398 CREB3L3Q68CJ9 461 aa21.1■□□□□ 0.97
CLIP2-201ENST00000223398 USO1O60763 962 aaKnown RBP21.1■□□□□ 0.97
CLIP2-201ENST00000223398 CCDC102AQ96A19 550 aa21.1■□□□□ 0.97
CLIP2-201ENST00000223398 GSTTP1A0A1W2PQM5 241 aa21.1■□□□□ 0.97
CLIP2-201ENST00000223398 PTPN14Q15678 1187 aa21.1■□□□□ 0.97
CLIP2-201ENST00000223398 FAM212AQ96EL1 285 aa21.1■□□□□ 0.97
CLIP2-201ENST00000223398 DBNDD2Q9BQY9 259 aa21.1■□□□□ 0.97
CLIP2-201ENST00000223398 CCDC171Q6TFL3 1326 aa21.09■□□□□ 0.97
CLIP2-201ENST00000223398 NOP2P46087 812 aaKnown RBP21.09■□□□□ 0.97
CLIP2-201ENST00000223398 ASIC1P78348 528 aa21.09■□□□□ 0.97
CLIP2-201ENST00000223398 PRPF4BQ13523 1007 aaKnown RBP21.09■□□□□ 0.97
CLIP2-201ENST00000223398 FAM114A1Q8IWE2 563 aa21.09■□□□□ 0.97
CLIP2-201ENST00000223398 XAGE2Q96GT9 111 aa21.09■□□□□ 0.97
CLIP2-201ENST00000223398 CCDC113Q9H0I3 377 aa21.09■□□□□ 0.97
CLIP2-201ENST00000223398 URI1O94763 535 aaPredicted RBP21.09■□□□□ 0.97
CLIP2-201ENST00000223398 LUZP1Q86V48 1076 aa21.09■□□□□ 0.97
CLIP2-201ENST00000223398 MAST1Q9Y2H9 1570 aa21.09■□□□□ 0.97
CLIP2-201ENST00000223398 PICK1Q9NRD5 415 aa21.09■□□□□ 0.97
CLIP2-201ENST00000223398 MCM7P33993 719 aa21.08■□□□□ 0.97
CLIP2-201ENST00000223398 CFAP65Q6ZU64 1925 aaKnown RBP21.08■□□□□ 0.97
CLIP2-201ENST00000223398 ZNF165P49910 485 aa21.08■□□□□ 0.97
CLIP2-201ENST00000223398 AKNAD1Q5T1N1 836 aa21.08■□□□□ 0.97
CLIP2-201ENST00000223398 GIMAP6Q6P9H5 292 aa21.08■□□□□ 0.97
CLIP2-201ENST00000223398 PLIN2Q99541 437 aa21.08■□□□□ 0.97
CLIP2-201ENST00000223398 GOPCQ9HD26 462 aa21.08■□□□□ 0.97
CLIP2-201ENST00000223398 CASQ1P31415 396 aa21.08■□□□□ 0.96
CLIP2-201ENST00000223398 UBXN4Q92575 508 aa21.08■□□□□ 0.96
CLIP2-201ENST00000223398 DHX58Q96C10 678 aa21.08■□□□□ 0.96
CLIP2-201ENST00000223398 TCP10Q12799 353 aa21.08■□□□□ 0.96
CLIP2-201ENST00000223398 N4BP3O15049 544 aa21.07■□□□□ 0.96
CLIP2-201ENST00000223398 PRDM1O75626 825 aa21.07■□□□□ 0.96
CLIP2-201ENST00000223398 LEKR1Q6ZMV7 388 aa21.07■□□□□ 0.96
CLIP2-201ENST00000223398 DHX37Q8IY37 1157 aaKnown RBP21.07■□□□□ 0.96
CLIP2-201ENST00000223398 USP19O94966 1318 aa21.07■□□□□ 0.96
CLIP2-201ENST00000223398 TNNI3KQ59H18 835 aa21.07■□□□□ 0.96
CLIP2-201ENST00000223398 AATFQ9NY61 560 aaKnown RBP eCLIP21.07■□□□□ 0.96
CLIP2-201ENST00000223398 FPGT-TNNI3KV9GXZ4 949 aa21.07■□□□□ 0.96
CLIP2-201ENST00000223398 B4DLN1 442 aa21.07■□□□□ 0.96
CLIP2-201ENST00000223398 BACH1O14867 736 aa21.07■□□□□ 0.96
CLIP2-201ENST00000223398 PARP1P09874 1014 aaKnown RBP21.07■□□□□ 0.96
CLIP2-201ENST00000223398 MRPL12P52815 198 aaKnown RBP21.07■□□□□ 0.96
CLIP2-201ENST00000223398 NDUFB9Q9Y6M9 179 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms