RNA–Protein interactions for RNA: ENST00000221494.9

SF3A2-201, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SF3A2, Length 1,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-201ENST00000221494 RPS6KB1P23443 525 aa18.72■□□□□ 0.59
SF3A2-201ENST00000221494 DHX8Q14562 1220 aaKnown RBP18.72■□□□□ 0.59
SF3A2-201ENST00000221494 CREBRFQ8IUR6 639 aa18.72■□□□□ 0.59
SF3A2-201ENST00000221494 GJD4Q96KN9 370 aaPredicted RBP18.72■□□□□ 0.59
SF3A2-201ENST00000221494 ZSCAN16Q9H4T2 348 aaPredicted RBP18.72■□□□□ 0.59
SF3A2-201ENST00000221494 ZHX1Q9UKY1 873 aaPredicted RBP18.72■□□□□ 0.59
SF3A2-201ENST00000221494 IGKV5-2P06315 115 aa18.72■□□□□ 0.59
SF3A2-201ENST00000221494 CPA1P15085 419 aa18.72■□□□□ 0.59
SF3A2-201ENST00000221494 CWF19L2Q2TBE0 894 aaKnown RBP18.72■□□□□ 0.59
SF3A2-201ENST00000221494 DRC7Q8IY82 874 aa18.72■□□□□ 0.59
SF3A2-201ENST00000221494 METTL22Q9BUU2 404 aaPredicted RBP18.72■□□□□ 0.59
SF3A2-201ENST00000221494 DDX41Q9UJV9 622 aaKnown RBP18.72■□□□□ 0.59
SF3A2-201ENST00000221494 ZNF165P49910 485 aa18.71■□□□□ 0.59
SF3A2-201ENST00000221494 ATL3Q6DD88 541 aa18.71■□□□□ 0.59
SF3A2-201ENST00000221494 IPO4Q8TEX9 1081 aaKnown RBP18.71■□□□□ 0.59
SF3A2-201ENST00000221494 MORC2Q9Y6X9 1032 aaPredicted RBP18.71■□□□□ 0.59
SF3A2-201ENST00000221494 ITGB4P16144 1822 aa18.7■□□□□ 0.58
SF3A2-201ENST00000221494 U2AF2P26368 475 aaKnown RBP eCLIP18.7■□□□□ 0.58
SF3A2-201ENST00000221494 SLFNL1Q499Z3 407 aa18.7■□□□□ 0.58
SF3A2-201ENST00000221494 CFAP45Q9UL16 551 aa18.7■□□□□ 0.58
SF3A2-201ENST00000221494 LAMB4A4D0S4 1761 aa18.7■□□□□ 0.58
SF3A2-201ENST00000221494 UTYO14607 1347 aa18.7■□□□□ 0.58
SF3A2-201ENST00000221494 STARD3NLO95772 234 aa18.7■□□□□ 0.58
SF3A2-201ENST00000221494 HSP90B1P14625 803 aaKnown RBP18.7■□□□□ 0.58
SF3A2-201ENST00000221494 KCNJ4P48050 445 aa18.7■□□□□ 0.58
SF3A2-201ENST00000221494 PLBD2Q8NHP8 589 aa18.7■□□□□ 0.58
SF3A2-201ENST00000221494 LARP6Q9BRS8 491 aaKnown RBP18.7■□□□□ 0.58
SF3A2-201ENST00000221494 CLIP2Q9UDT6 1046 aa18.7■□□□□ 0.58
SF3A2-201ENST00000221494 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.7■□□□□ 0.58
SF3A2-201ENST00000221494 KCNQ2O43526 872 aa18.69■□□□□ 0.58
SF3A2-201ENST00000221494 ONECUT3O60422 494 aaPredicted RBP18.69■□□□□ 0.58
SF3A2-201ENST00000221494 TTLL7Q6ZT98 887 aa18.69■□□□□ 0.58
SF3A2-201ENST00000221494 NECAB1Q8N987 351 aa18.69■□□□□ 0.58
SF3A2-201ENST00000221494 ATRNO75882 1429 aa18.69■□□□□ 0.58
SF3A2-201ENST00000221494 CYP19A1P11511 503 aaPredicted RBP18.68■□□□□ 0.58
SF3A2-201ENST00000221494 USPL1Q5W0Q7 1092 aa18.68■□□□□ 0.58
SF3A2-201ENST00000221494 TRPC5Q9UL62 973 aaPredicted RBP18.68■□□□□ 0.58
SF3A2-201ENST00000221494 A0A0G2JS52 829 aa18.68■□□□□ 0.58
SF3A2-201ENST00000221494 NEURL1BA8MQ27 555 aa18.68■□□□□ 0.58
SF3A2-201ENST00000221494 TUBB4AP04350 444 aa18.68■□□□□ 0.58
SF3A2-201ENST00000221494 NEXNQ0ZGT2 675 aa18.68■□□□□ 0.58
SF3A2-201ENST00000221494 MYD88Q99836 296 aa18.68■□□□□ 0.58
SF3A2-201ENST00000221494 LLPHQ9BRT6 129 aaKnown RBP18.68■□□□□ 0.58
SF3A2-201ENST00000221494 C9orf78Q9NZ63 289 aaPredicted RBP18.68■□□□□ 0.58
SF3A2-201ENST00000221494 DOT1LQ8TEK3 1739 aa18.68■□□□□ 0.58
SF3A2-201ENST00000221494 GOLGA6L19H0YKK7 550 aa18.67■□□□□ 0.58
SF3A2-201ENST00000221494 RESTQ13127 1097 aa18.67■□□□□ 0.58
SF3A2-201ENST00000221494 NMIQ13287 307 aaPredicted RBP18.67■□□□□ 0.58
SF3A2-201ENST00000221494 STX1AQ16623 288 aa18.67■□□□□ 0.58
SF3A2-201ENST00000221494 TPD52L1Q16890 204 aaPredicted RBP18.67■□□□□ 0.58
SF3A2-201ENST00000221494 CEP135Q66GS9 1140 aa18.67■□□□□ 0.58
SF3A2-201ENST00000221494 TICAM2Q86XR7 235 aa18.67■□□□□ 0.58
SF3A2-201ENST00000221494 ZNF397Q8NF99 534 aaPredicted RBP18.67■□□□□ 0.58
SF3A2-201ENST00000221494 C16orf45Q96MC5 204 aaPredicted RBP18.67■□□□□ 0.58
SF3A2-201ENST00000221494 FAM177BA6PVY3 158 aa18.66■□□□□ 0.58
SF3A2-201ENST00000221494 GRM8O00222 908 aa18.66■□□□□ 0.58
SF3A2-201ENST00000221494 TOB2Q14106 344 aaPredicted RBP18.66■□□□□ 0.58
SF3A2-201ENST00000221494 CAMK4Q16566 473 aa18.66■□□□□ 0.58
SF3A2-201ENST00000221494 NYAP1Q6ZVC0 841 aa18.66■□□□□ 0.58
SF3A2-201ENST00000221494 LRMPQ12912 555 aa18.66■□□□□ 0.58
SF3A2-201ENST00000221494 IQCB1Q15051 598 aa18.66■□□□□ 0.58
SF3A2-201ENST00000221494 AACSQ86V21 672 aa18.66■□□□□ 0.58
SF3A2-201ENST00000221494 LRRC8AQ8IWT6 810 aa18.66■□□□□ 0.58
SF3A2-201ENST00000221494 CKAP2LQ8IYA6 745 aa18.66■□□□□ 0.58
SF3A2-201ENST00000221494 BICD2Q8TD16 824 aa18.66■□□□□ 0.58
SF3A2-201ENST00000221494 CACTINQ8WUQ7 758 aaKnown RBP18.66■□□□□ 0.58
SF3A2-201ENST00000221494 GTF3C6Q969F1 213 aa18.66■□□□□ 0.58
SF3A2-201ENST00000221494 CHMP4CQ96CF2 233 aa18.66■□□□□ 0.58
SF3A2-201ENST00000221494 SPDYE4A6NLX3 237 aa18.65■□□□□ 0.58
SF3A2-201ENST00000221494 GSDMDP57764 484 aa18.65■□□□□ 0.58
SF3A2-201ENST00000221494 GCKRQ14397 625 aa18.65■□□□□ 0.58
SF3A2-201ENST00000221494 THSD7AQ9UPZ6 1657 aa18.65■□□□□ 0.58
SF3A2-201ENST00000221494 KCNJ6P48051 423 aa18.64■□□□□ 0.58
SF3A2-201ENST00000221494 NAA16Q6N069 864 aaPredicted RBP18.64■□□□□ 0.58
SF3A2-201ENST00000221494 FERMT3Q86UX7 667 aa18.64■□□□□ 0.58
SF3A2-201ENST00000221494 KIF18AQ8NI77 898 aa18.64■□□□□ 0.58
SF3A2-201ENST00000221494 ERO1AQ96HE7 468 aa18.64■□□□□ 0.58
SF3A2-201ENST00000221494 PGBD1Q96JS3 809 aa18.64■□□□□ 0.58
SF3A2-201ENST00000221494 NR1I2O75469 434 aa18.64■□□□□ 0.57
SF3A2-201ENST00000221494 CDK11BP21127 795 aaKnown RBP18.64■□□□□ 0.57
SF3A2-201ENST00000221494 QTRT2Q9H974 415 aaKnown RBP18.64■□□□□ 0.57
SF3A2-201ENST00000221494 FAM53CQ9NYF3 392 aa18.64■□□□□ 0.57
SF3A2-201ENST00000221494 LOC102724428A0A0B4J2F2 783 aa18.63■□□□□ 0.57
SF3A2-201ENST00000221494 SIK1P57059 783 aa18.63■□□□□ 0.57
SF3A2-201ENST00000221494 TPRNQ4KMQ1 711 aa18.63■□□□□ 0.57
SF3A2-201ENST00000221494 KAZALD1Q96I82 304 aa18.63■□□□□ 0.57
SF3A2-201ENST00000221494 DNAJC25Q9H1X3 360 aa18.63■□□□□ 0.57
SF3A2-201ENST00000221494 IMPACTQ9P2X3 320 aa18.63■□□□□ 0.57
SF3A2-201ENST00000221494 NRBP1Q9UHY1 535 aa18.63■□□□□ 0.57
SF3A2-201ENST00000221494 ATP5J2-PTCD1G3V325 749 aa18.62■□□□□ 0.57
SF3A2-201ENST00000221494 G3BP1Q13283 466 aaKnown RBP eCLIP18.62■□□□□ 0.57
SF3A2-201ENST00000221494 PTPN14Q15678 1187 aa18.62■□□□□ 0.57
SF3A2-201ENST00000221494 KRT222Q8N1A0 295 aa18.62■□□□□ 0.57
SF3A2-201ENST00000221494 SMARCC1Q92922 1105 aaPredicted RBP18.62■□□□□ 0.57
SF3A2-201ENST00000221494 FAM227BQ96M60 508 aa18.62■□□□□ 0.57
SF3A2-201ENST00000221494 ANO10Q9NW15 660 aa18.62■□□□□ 0.57
SF3A2-201ENST00000221494 RCOR1Q9UKL0 485 aa18.62■□□□□ 0.57
SF3A2-201ENST00000221494 PTF1AQ7RTS3 328 aa18.62■□□□□ 0.57
SF3A2-201ENST00000221494 SUCLG2Q96I99 432 aa18.62■□□□□ 0.57
SF3A2-201ENST00000221494 ZBTB3Q9H5J0 574 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms