RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 MFSD14BQ5SR56 506 aa15.89■□□□□ 0.13
SIX4-201ENST00000216513 KLHDC4Q8TBB5 520 aa15.89■□□□□ 0.13
SIX4-201ENST00000216513 SRP68Q9UHB9 627 aaKnown RBP15.89■□□□□ 0.13
SIX4-201ENST00000216513 NOM1Q5C9Z4 860 aaKnown RBP15.88■□□□□ 0.13
SIX4-201ENST00000216513 FNBP4Q8N3X1 1017 aaPredicted RBP15.88■□□□□ 0.13
SIX4-201ENST00000216513 TNMDQ9H2S6 317 aa15.88■□□□□ 0.13
SIX4-201ENST00000216513 USP40Q9NVE5 1235 aa15.88■□□□□ 0.13
SIX4-201ENST00000216513 PIM2Q9P1W9 311 aa15.88■□□□□ 0.13
SIX4-201ENST00000216513 DACH1Q9UI36 760 aa15.88■□□□□ 0.13
SIX4-201ENST00000216513 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.88■□□□□ 0.13
SIX4-201ENST00000216513 PTPDC1A2A3K4 754 aa15.88■□□□□ 0.13
SIX4-201ENST00000216513 MBD4O95243 580 aa15.88■□□□□ 0.13
SIX4-201ENST00000216513 GPS2Q13227 327 aa15.88■□□□□ 0.13
SIX4-201ENST00000216513 ENOX2Q16206 610 aaKnown RBP15.88■□□□□ 0.13
SIX4-201ENST00000216513 ZNHIT6Q9NWK9 470 aaKnown RBP15.88■□□□□ 0.13
SIX4-201ENST00000216513 RAD17O75943 681 aa15.88■□□□□ 0.13
SIX4-201ENST00000216513 SMARCE1Q969G3 411 aa15.88■□□□□ 0.13
SIX4-201ENST00000216513 LRRC2Q9BYS8 371 aa15.88■□□□□ 0.13
SIX4-201ENST00000216513 FAM193AP78312 1265 aa15.88■□□□□ 0.13
SIX4-201ENST00000216513 RNF181Q9P0P0 153 aa15.88■□□□□ 0.13
SIX4-201ENST00000216513 ARAP3Q8WWN8 1544 aa15.87■□□□□ 0.13
SIX4-201ENST00000216513 KCNQ3O43525 872 aa15.87■□□□□ 0.13
SIX4-201ENST00000216513 POTEJP0CG39 1038 aa15.87■□□□□ 0.13
SIX4-201ENST00000216513 SETQ01105 290 aaPredicted RBP15.87■□□□□ 0.13
SIX4-201ENST00000216513 CALML4Q96GE6 196 aa15.87■□□□□ 0.13
SIX4-201ENST00000216513 GINS2Q9Y248 185 aa15.87■□□□□ 0.13
SIX4-201ENST00000216513 ARHGEF6Q15052 776 aa15.87■□□□□ 0.13
SIX4-201ENST00000216513 TESK2Q96S53 571 aa15.87■□□□□ 0.13
SIX4-201ENST00000216513 CNNM2Q9H8M5 875 aa15.87■□□□□ 0.13
SIX4-201ENST00000216513 IDEP14735 1019 aa15.87■□□□□ 0.13
SIX4-201ENST00000216513 MCM5P33992 734 aa15.87■□□□□ 0.13
SIX4-201ENST00000216513 GNAT2P19087 354 aa15.87■□□□□ 0.13
SIX4-201ENST00000216513 DNA2P51530 1060 aa15.87■□□□□ 0.13
SIX4-201ENST00000216513 G2E3Q7L622 706 aa15.87■□□□□ 0.13
SIX4-201ENST00000216513 TEKT1Q969V4 418 aa15.87■□□□□ 0.13
SIX4-201ENST00000216513 RRP36Q96EU6 259 aaKnown RBP15.87■□□□□ 0.13
SIX4-201ENST00000216513 DBNDD1Q9H9R9 158 aa15.87■□□□□ 0.13
SIX4-201ENST00000216513 CFAP45Q9UL16 551 aa15.87■□□□□ 0.13
SIX4-201ENST00000216513 TTLL7Q6ZT98 887 aa15.86■□□□□ 0.13
SIX4-201ENST00000216513 MAPKAPK5Q8IW41 473 aa15.86■□□□□ 0.13
SIX4-201ENST00000216513 A0A1B0GUL7 405 aa15.86■□□□□ 0.13
SIX4-201ENST00000216513 CLRN2A0PK11 232 aa15.86■□□□□ 0.13
SIX4-201ENST00000216513 SPATA31A3Q5VYP0 1347 aa15.86■□□□□ 0.13
SIX4-201ENST00000216513 C21orf2O43822 256 aa15.86■□□□□ 0.13
SIX4-201ENST00000216513 NEK1Q96PY6 1258 aa15.86■□□□□ 0.13
SIX4-201ENST00000216513 TCHPQ9BT92 498 aa15.86■□□□□ 0.13
SIX4-201ENST00000216513 TCP11L1Q9NUJ3 509 aa15.86■□□□□ 0.13
SIX4-201ENST00000216513 WDR33Q9C0J8 1336 aaKnown RBP15.86■□□□□ 0.13
SIX4-201ENST00000216513 ATP8B2P98198 1209 aa15.86■□□□□ 0.13
SIX4-201ENST00000216513 TAF12Q16514 161 aa15.86■□□□□ 0.13
SIX4-201ENST00000216513 CCDC93Q567U6 631 aa15.86■□□□□ 0.13
SIX4-201ENST00000216513 FILIP1Q7Z7B0 1213 aa15.86■□□□□ 0.13
SIX4-201ENST00000216513 ARHGEF25Q86VW2 580 aa15.86■□□□□ 0.13
SIX4-201ENST00000216513 TTLL6Q8N841 843 aa15.86■□□□□ 0.13
SIX4-201ENST00000216513 TSG101Q99816 390 aa15.86■□□□□ 0.13
SIX4-201ENST00000216513 PANK2Q9BZ23 570 aa15.86■□□□□ 0.13
SIX4-201ENST00000216513 EYA2O00167 538 aa15.85■□□□□ 0.13
SIX4-201ENST00000216513 IGHDP01880 384 aa15.85■□□□□ 0.13
SIX4-201ENST00000216513 MCMDC2Q4G0Z9 681 aa15.85■□□□□ 0.13
SIX4-201ENST00000216513 ATP2B4P23634 1241 aa15.85■□□□□ 0.13
SIX4-201ENST00000216513 FAM47CQ5HY64 1035 aa15.85■□□□□ 0.13
SIX4-201ENST00000216513 CHST3Q7LGC8 479 aa15.85■□□□□ 0.13
SIX4-201ENST00000216513 KLF18A0A0U1RQI7 1052 aa15.85■□□□□ 0.13
SIX4-201ENST00000216513 SPOUT1Q5T280 376 aaKnown RBP15.85■□□□□ 0.13
SIX4-201ENST00000216513 ZBTB1Q9Y2K1 713 aa15.85■□□□□ 0.13
SIX4-201ENST00000216513 ZBED4O75132 1171 aa15.85■□□□□ 0.13
SIX4-201ENST00000216513 FAM212AQ96EL1 285 aa15.85■□□□□ 0.13
SIX4-201ENST00000216513 TCEANC2Q96MN5 208 aa15.85■□□□□ 0.13
SIX4-201ENST00000216513 ARMT1Q9H993 441 aa15.85■□□□□ 0.13
SIX4-201ENST00000216513 RNF113AO15541 343 aaKnown RBP15.85■□□□□ 0.13
SIX4-201ENST00000216513 CCDC181Q5TID7 509 aa15.85■□□□□ 0.13
SIX4-201ENST00000216513 TGFBRAP1Q8WUH2 860 aa15.85■□□□□ 0.13
SIX4-201ENST00000216513 ZKSCAN3Q9BRR0 538 aa15.85■□□□□ 0.13
SIX4-201ENST00000216513 PODXL2Q9NZ53 605 aa15.85■□□□□ 0.13
SIX4-201ENST00000216513 MYCLP12524 364 aaPredicted RBP15.84■□□□□ 0.13
SIX4-201ENST00000216513 XAGE2Q96GT9 111 aa15.84■□□□□ 0.13
SIX4-201ENST00000216513 RTN1Q16799 776 aa15.84■□□□□ 0.13
SIX4-201ENST00000216513 DCAF15Q66K64 600 aa15.84■□□□□ 0.13
SIX4-201ENST00000216513 KLHL10Q6JEL2 608 aa15.84■□□□□ 0.13
SIX4-201ENST00000216513 CCDC97Q96F63 343 aaPredicted RBP15.84■□□□□ 0.13
SIX4-201ENST00000216513 POLR3AO14802 1390 aaPredicted RBP15.84■□□□□ 0.13
SIX4-201ENST00000216513 ZBTB43O43298 467 aa15.84■□□□□ 0.13
SIX4-201ENST00000216513 FCHSD1Q86WN1 690 aa15.84■□□□□ 0.13
SIX4-201ENST00000216513 PUF60Q9UHX1 559 aaKnown RBP15.84■□□□□ 0.13
SIX4-201ENST00000216513 NOP56O00567 594 aaKnown RBP15.84■□□□□ 0.13
SIX4-201ENST00000216513 RUFY1Q96T51 708 aa15.84■□□□□ 0.13
SIX4-201ENST00000216513 GNAQP50148 359 aa15.83■□□□□ 0.13
SIX4-201ENST00000216513 CTSWP56202 376 aa15.83■□□□□ 0.13
SIX4-201ENST00000216513 AS3MTQ9HBK9 375 aa15.83■□□□□ 0.13
SIX4-201ENST00000216513 SPC25Q9HBM1 224 aa15.83■□□□□ 0.13
SIX4-201ENST00000216513 C6orf50Q9HD87 102 aa15.83■□□□□ 0.13
SIX4-201ENST00000216513 PZPP20742 1482 aa15.83■□□□□ 0.13
SIX4-201ENST00000216513 CCDC174Q6PII3 467 aa15.83■□□□□ 0.13
SIX4-201ENST00000216513 TBC1D22AQ8WUA7 517 aa15.83■□□□□ 0.13
SIX4-201ENST00000216513 MMRN2Q9H8L6 949 aa15.83■□□□□ 0.13
SIX4-201ENST00000216513 ERMNQ8TAM6 284 aa15.83■□□□□ 0.12
SIX4-201ENST00000216513 TBCAO75347 108 aaKnown RBP15.83■□□□□ 0.12
SIX4-201ENST00000216513 ARMC9Q7Z3E5 817 aa15.83■□□□□ 0.12
SIX4-201ENST00000216513 RBM27Q9P2N5 1060 aaKnown RBP15.83■□□□□ 0.12
SIX4-201ENST00000216513 MAGI3Q5TCQ9 1506 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms