RNA–Protein interactions for RNA: ENST00000216083.6

CBX6-201, Transcript of chromobox 6, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CBX6, Length 3,191 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6-201ENST00000216083 NLRP3Q96P20 1036 aa17.54■□□□□ 0.4
CBX6-201ENST00000216083 CCDC171Q6TFL3 1326 aa17.54■□□□□ 0.4
CBX6-201ENST00000216083 K7ELQ4 463 aaPredicted RBP17.54■□□□□ 0.4
CBX6-201ENST00000216083 KCNJ4P48050 445 aa17.54■□□□□ 0.4
CBX6-201ENST00000216083 COL9A3Q14050 684 aaPredicted RBP17.54■□□□□ 0.4
CBX6-201ENST00000216083 SF3B3Q15393 1217 aaKnown RBP17.54■□□□□ 0.4
CBX6-201ENST00000216083 PUM3Q15397 648 aaKnown RBP17.54■□□□□ 0.4
CBX6-201ENST00000216083 CCDC102BQ68D86 513 aa17.54■□□□□ 0.4
CBX6-201ENST00000216083 NYXQ9GZU5 481 aa17.54■□□□□ 0.4
CBX6-201ENST00000216083 TFCP2L1Q9NZI6 479 aa17.54■□□□□ 0.4
CBX6-201ENST00000216083 IQSEC3Q9UPP2 1182 aaPredicted RBP17.54■□□□□ 0.4
CBX6-201ENST00000216083 SNX14Q9Y5W7 946 aa17.54■□□□□ 0.4
CBX6-201ENST00000216083 TAF6LQ9Y6J9 622 aa17.54■□□□□ 0.4
CBX6-201ENST00000216083 MROH5Q6ZUA9 1318 aa17.54■□□□□ 0.4
CBX6-201ENST00000216083 ANKRD18AQ8IVF6 992 aa17.53■□□□□ 0.4
CBX6-201ENST00000216083 LARP6Q9BRS8 491 aaKnown RBP17.53■□□□□ 0.4
CBX6-201ENST00000216083 HIP1O00291 1037 aa17.53■□□□□ 0.4
CBX6-201ENST00000216083 RBM8AQ9Y5S9 174 aaKnown RBP17.53■□□□□ 0.4
CBX6-201ENST00000216083 UBR3Q6ZT12 1888 aa17.53■□□□□ 0.4
CBX6-201ENST00000216083 HSP90B1P14625 803 aaKnown RBP17.52■□□□□ 0.4
CBX6-201ENST00000216083 FGFR2P21802 821 aa17.52■□□□□ 0.4
CBX6-201ENST00000216083 SLC10A5Q5PT55 438 aa17.52■□□□□ 0.4
CBX6-201ENST00000216083 CDC5LQ99459 802 aaKnown RBP17.52■□□□□ 0.4
CBX6-201ENST00000216083 BCAMP50895 628 aa17.52■□□□□ 0.4
CBX6-201ENST00000216083 LPIN2Q92539 896 aa17.52■□□□□ 0.4
CBX6-201ENST00000216083 ADCK5Q3MIX3 580 aa17.52■□□□□ 0.39
CBX6-201ENST00000216083 VPS53Q5VIR6 699 aa17.51■□□□□ 0.39
CBX6-201ENST00000216083 CNBD1Q8NA66 436 aa17.51■□□□□ 0.39
CBX6-201ENST00000216083 TNPO1Q92973 898 aaKnown RBP17.51■□□□□ 0.39
CBX6-201ENST00000216083 PDCL3Q9H2J4 239 aa17.51■□□□□ 0.39
CBX6-201ENST00000216083 ZHX1Q9UKY1 873 aaPredicted RBP17.51■□□□□ 0.39
CBX6-201ENST00000216083 MED23Q9ULK4 1368 aa17.51■□□□□ 0.39
CBX6-201ENST00000216083 LRP5O75197 1615 aa17.51■□□□□ 0.39
CBX6-201ENST00000216083 NCLP19338 710 aaKnown RBP17.5■□□□□ 0.39
CBX6-201ENST00000216083 LAMB2P55268 1798 aa17.5■□□□□ 0.39
CBX6-201ENST00000216083 CASZ1Q86V15 1759 aa17.5■□□□□ 0.39
CBX6-201ENST00000216083 RTL9Q8NET4 1388 aa17.5■□□□□ 0.39
CBX6-201ENST00000216083 CYP2E1P05181 493 aaPredicted RBP17.5■□□□□ 0.39
CBX6-201ENST00000216083 ADRA2BP18089 450 aa17.5■□□□□ 0.39
CBX6-201ENST00000216083 PRR5LQ6MZQ0 368 aa17.5■□□□□ 0.39
CBX6-201ENST00000216083 CARMIL3Q8ND23 1372 aa17.5■□□□□ 0.39
CBX6-201ENST00000216083 ST18O60284 1047 aa17.5■□□□□ 0.39
CBX6-201ENST00000216083 SLC5A1P13866 664 aa17.5■□□□□ 0.39
CBX6-201ENST00000216083 SSFA2P28290 1259 aa17.5■□□□□ 0.39
CBX6-201ENST00000216083 MINPP1Q9UNW1 487 aa17.5■□□□□ 0.39
CBX6-201ENST00000216083 DDR1Q08345 913 aa17.49■□□□□ 0.39
CBX6-201ENST00000216083 MCMDC2Q4G0Z9 681 aa17.49■□□□□ 0.39
CBX6-201ENST00000216083 MAP4K1Q92918 833 aa17.49■□□□□ 0.39
CBX6-201ENST00000216083 RPS8P62241 208 aaKnown RBP17.49■□□□□ 0.39
CBX6-201ENST00000216083 NECTIN1Q15223 517 aa17.49■□□□□ 0.39
CBX6-201ENST00000216083 PIH1D3Q9NQM4 214 aaKnown RBP17.49■□□□□ 0.39
CBX6-201ENST00000216083 M0R2C6 588 aa17.48■□□□□ 0.39
CBX6-201ENST00000216083 SERPINB2P05120 415 aa17.48■□□□□ 0.39
CBX6-201ENST00000216083 KLRK1P26718 216 aa17.48■□□□□ 0.39
CBX6-201ENST00000216083 TM4SF1P30408 202 aa17.48■□□□□ 0.39
CBX6-201ENST00000216083 GYG1P46976 350 aa17.48■□□□□ 0.39
CBX6-201ENST00000216083 ANAPC15P60006 121 aa17.48■□□□□ 0.39
CBX6-201ENST00000216083 WASHC4Q2M389 1173 aa17.48■□□□□ 0.39
CBX6-201ENST00000216083 CREB3L3Q68CJ9 461 aa17.48■□□□□ 0.39
CBX6-201ENST00000216083 COL23A1Q86Y22 540 aaPredicted RBP17.48■□□□□ 0.39
CBX6-201ENST00000216083 OSBP2Q969R2 916 aa17.48■□□□□ 0.39
CBX6-201ENST00000216083 COL24A1Q17RW2 1714 aa17.48■□□□□ 0.39
CBX6-201ENST00000216083 TNRC6CQ9HCJ0 1690 aaKnown RBP17.48■□□□□ 0.39
CBX6-201ENST00000216083 A0A0G2JLW4 131 aa17.48■□□□□ 0.39
CBX6-201ENST00000216083 DTNBO60941 627 aa17.48■□□□□ 0.39
CBX6-201ENST00000216083 TPM2P07951 284 aa17.48■□□□□ 0.39
CBX6-201ENST00000216083 RASGRF1Q13972 1273 aa17.48■□□□□ 0.39
CBX6-201ENST00000216083 HMG20BQ9P0W2 317 aa17.48■□□□□ 0.39
CBX6-201ENST00000216083 PLSCR1O15162 318 aa17.48■□□□□ 0.39
CBX6-201ENST00000216083 RGL2O15211 777 aa17.48■□□□□ 0.39
CBX6-201ENST00000216083 RNF113AO15541 343 aaKnown RBP17.48■□□□□ 0.39
CBX6-201ENST00000216083 IDH1O75874 414 aaKnown RBP17.48■□□□□ 0.39
CBX6-201ENST00000216083 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.48■□□□□ 0.39
CBX6-201ENST00000216083 BSDC1Q9NW68 430 aaPredicted RBP17.48■□□□□ 0.39
CBX6-201ENST00000216083 AKAP11Q9UKA4 1901 aa17.47■□□□□ 0.39
CBX6-201ENST00000216083 MAST3O60307 1309 aa17.47■□□□□ 0.39
CBX6-201ENST00000216083 CASTP20810 708 aaKnown RBP17.47■□□□□ 0.39
CBX6-201ENST00000216083 MSL1Q68DK7 614 aa17.47■□□□□ 0.39
CBX6-201ENST00000216083 TCEANC2Q96MN5 208 aa17.47■□□□□ 0.39
CBX6-201ENST00000216083 JAKMIP1Q96N16 626 aaKnown RBP17.47■□□□□ 0.39
CBX6-201ENST00000216083 MYO5AQ9Y4I1 1855 aaKnown RBP17.47■□□□□ 0.39
CBX6-201ENST00000216083 DDX11L8A8MPP1 907 aa17.47■□□□□ 0.39
CBX6-201ENST00000216083 ZMYM1Q5SVZ6 1142 aa17.47■□□□□ 0.39
CBX6-201ENST00000216083 SLC27A2O14975 620 aa17.46■□□□□ 0.39
CBX6-201ENST00000216083 MSNP26038 577 aaKnown RBP17.46■□□□□ 0.39
CBX6-201ENST00000216083 EN1Q05925 392 aaPredicted RBP17.46■□□□□ 0.39
CBX6-201ENST00000216083 ZGPATQ8N5A5 531 aaKnown RBP17.46■□□□□ 0.39
CBX6-201ENST00000216083 PUS7LQ9H0K6 701 aaKnown RBP17.46■□□□□ 0.39
CBX6-201ENST00000216083 NASPP49321 788 aaPredicted RBP17.45■□□□□ 0.38
CBX6-201ENST00000216083 FBXO41Q8TF61 875 aa17.45■□□□□ 0.38
CBX6-201ENST00000216083 AKT1S1Q96B36 256 aa17.45■□□□□ 0.38
CBX6-201ENST00000216083 PRDM4Q9UKN5 801 aa17.45■□□□□ 0.38
CBX6-201ENST00000216083 WWC3Q9ULE0 1092 aa17.45■□□□□ 0.38
CBX6-201ENST00000216083 ARID4AP29374 1257 aaPredicted RBP17.45■□□□□ 0.38
CBX6-201ENST00000216083 EZH2Q15910 746 aaKnown RBP17.45■□□□□ 0.38
CBX6-201ENST00000216083 SPATA5Q8NB90 893 aa17.45■□□□□ 0.38
CBX6-201ENST00000216083 SLC9C2Q5TAH2 1124 aa17.44■□□□□ 0.38
CBX6-201ENST00000216083 MPNDQ8N594 471 aa17.44■□□□□ 0.38
CBX6-201ENST00000216083 TMX3Q96JJ7 454 aa17.44■□□□□ 0.38
CBX6-201ENST00000216083 EPB41L2O43491 1005 aaKnown RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms