RNA–Protein interactions for RNA: ENST00000187762.6

TMEM38A-201, Transcript of transmembrane protein 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM38A, Length 2,649 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38A-201ENST00000187762 TPM1P09493 284 aa17.26■□□□□ 0.35
TMEM38A-201ENST00000187762 AIMP1Q12904 312 aaKnown RBP17.26■□□□□ 0.35
TMEM38A-201ENST00000187762 RGPD5Q99666 1765 aa17.26■□□□□ 0.35
TMEM38A-201ENST00000187762 EIF3CLB5ME19 914 aaKnown RBP17.26■□□□□ 0.35
TMEM38A-201ENST00000187762 TUBB4AP04350 444 aa17.26■□□□□ 0.35
TMEM38A-201ENST00000187762 PTH1RQ03431 593 aa17.26■□□□□ 0.35
TMEM38A-201ENST00000187762 AMOTQ4VCS5 1084 aa17.26■□□□□ 0.35
TMEM38A-201ENST00000187762 KSR2Q6VAB6 950 aa17.26■□□□□ 0.35
TMEM38A-201ENST00000187762 FERMT3Q86UX7 667 aa17.26■□□□□ 0.35
TMEM38A-201ENST00000187762 CLASRPQ8N2M8 674 aaKnown RBP17.26■□□□□ 0.35
TMEM38A-201ENST00000187762 EIF3CQ99613 913 aaKnown RBP17.26■□□□□ 0.35
TMEM38A-201ENST00000187762 GLRX3O76003 335 aaKnown RBP17.25■□□□□ 0.35
TMEM38A-201ENST00000187762 MTX1Q13505 466 aa17.25■□□□□ 0.35
TMEM38A-201ENST00000187762 TTC41PQ6P2S7 1318 aa17.25■□□□□ 0.35
TMEM38A-201ENST00000187762 USP42Q9H9J4 1324 aaKnown RBP17.25■□□□□ 0.35
TMEM38A-201ENST00000187762 EFCAB8A8MWE9 144 aa17.25■□□□□ 0.35
TMEM38A-201ENST00000187762 CCDC91Q7Z6B0 441 aa17.25■□□□□ 0.35
TMEM38A-201ENST00000187762 DDX54Q8TDD1 881 aaKnown RBP17.25■□□□□ 0.35
TMEM38A-201ENST00000187762 SPATA32Q96LK8 384 aa17.25■□□□□ 0.35
TMEM38A-201ENST00000187762 E2F4Q16254 413 aa17.24■□□□□ 0.35
TMEM38A-201ENST00000187762 CDC37L1Q7L3B6 337 aa17.24■□□□□ 0.35
TMEM38A-201ENST00000187762 SUGP1Q8IWZ8 645 aaKnown RBP17.24■□□□□ 0.35
TMEM38A-201ENST00000187762 PPM1EQ8WY54 764 aa17.24■□□□□ 0.35
TMEM38A-201ENST00000187762 SUCLG2Q96I99 432 aa17.24■□□□□ 0.35
TMEM38A-201ENST00000187762 SRRTQ9BXP5 876 aaKnown RBP17.24■□□□□ 0.35
TMEM38A-201ENST00000187762 HYPKQ9NX55 129 aa17.24■□□□□ 0.35
TMEM38A-201ENST00000187762 SCAND2PQ9GZW5 306 aaPredicted RBP17.24■□□□□ 0.35
TMEM38A-201ENST00000187762 CXorf56Q9H5V9 222 aa17.24■□□□□ 0.35
TMEM38A-201ENST00000187762 ECHDC1Q9NTX5 307 aa17.24■□□□□ 0.35
TMEM38A-201ENST00000187762 PHLPP2Q6ZVD8 1323 aa17.24■□□□□ 0.35
TMEM38A-201ENST00000187762 H3BQF6 201 aa17.23■□□□□ 0.35
TMEM38A-201ENST00000187762 ALDH1L1O75891 902 aa17.23■□□□□ 0.35
TMEM38A-201ENST00000187762 ST3GAL1Q11201 340 aa17.23■□□□□ 0.35
TMEM38A-201ENST00000187762 ADCK5Q3MIX3 580 aa17.23■□□□□ 0.35
TMEM38A-201ENST00000187762 FOXR1Q6PIV2 292 aa17.23■□□□□ 0.35
TMEM38A-201ENST00000187762 AACSQ86V21 672 aa17.23■□□□□ 0.35
TMEM38A-201ENST00000187762 KAZALD1Q96I82 304 aa17.23■□□□□ 0.35
TMEM38A-201ENST00000187762 OSBPL5Q9H0X9 879 aaPredicted RBP17.23■□□□□ 0.35
TMEM38A-201ENST00000187762 EPC1Q9H2F5 836 aa17.23■□□□□ 0.35
TMEM38A-201ENST00000187762 DNAI1Q9UI46 699 aa17.23■□□□□ 0.35
TMEM38A-201ENST00000187762 SIPA1L3O60292 1781 aaPredicted RBP17.23■□□□□ 0.35
TMEM38A-201ENST00000187762 IFIT2P09913 472 aaKnown RBP17.23■□□□□ 0.35
TMEM38A-201ENST00000187762 EVCP57679 992 aa17.23■□□□□ 0.35
TMEM38A-201ENST00000187762 ETF1P62495 437 aaKnown RBP17.23■□□□□ 0.35
TMEM38A-201ENST00000187762 SWT1Q5T5J6 900 aaKnown RBP17.23■□□□□ 0.35
TMEM38A-201ENST00000187762 PRPF40BQ6NWY9 871 aaKnown RBP17.23■□□□□ 0.35
TMEM38A-201ENST00000187762 CARD6Q9BX69 1037 aa17.23■□□□□ 0.35
TMEM38A-201ENST00000187762 HEG1Q9ULI3 1381 aa17.23■□□□□ 0.35
TMEM38A-201ENST00000187762 NCAPD2Q15021 1401 aa17.23■□□□□ 0.35
TMEM38A-201ENST00000187762 BECN2A8MW95 431 aa17.22■□□□□ 0.35
TMEM38A-201ENST00000187762 GSCP56915 257 aaPredicted RBP17.22■□□□□ 0.35
TMEM38A-201ENST00000187762 SLC39A6Q13433 755 aa17.22■□□□□ 0.35
TMEM38A-201ENST00000187762 LARP1BQ659C4 914 aaKnown RBP17.22■□□□□ 0.35
TMEM38A-201ENST00000187762 HOMER1Q86YM7 354 aa17.22■□□□□ 0.35
TMEM38A-201ENST00000187762 BICD2Q8TD16 824 aa17.22■□□□□ 0.35
TMEM38A-201ENST00000187762 LEO1Q8WVC0 666 aaPredicted RBP17.22■□□□□ 0.35
TMEM38A-201ENST00000187762 FUT8Q9BYC5 575 aa17.22■□□□□ 0.35
TMEM38A-201ENST00000187762 BICC1Q9H694 974 aaKnown RBP17.22■□□□□ 0.35
TMEM38A-201ENST00000187762 ARFGAP3Q9NP61 516 aa17.22■□□□□ 0.35
TMEM38A-201ENST00000187762 DONSONQ9NYP3 566 aa17.22■□□□□ 0.35
TMEM38A-201ENST00000187762 TFIP11Q9UBB9 837 aaKnown RBP17.22■□□□□ 0.35
TMEM38A-201ENST00000187762 MCTP2Q6DN12 878 aa17.22■□□□□ 0.35
TMEM38A-201ENST00000187762 SLIT3O75094 1523 aa17.22■□□□□ 0.35
TMEM38A-201ENST00000187762 RPS6KA5O75582 802 aa17.21■□□□□ 0.35
TMEM38A-201ENST00000187762 CORO7P57737 925 aa17.21■□□□□ 0.35
TMEM38A-201ENST00000187762 ZSCAN31Q96LW9 406 aaPredicted RBP17.21■□□□□ 0.35
TMEM38A-201ENST00000187762 CCDC8Q9H0W5 538 aaPredicted RBP17.21■□□□□ 0.35
TMEM38A-201ENST00000187762 SIL1Q9H173 461 aa17.21■□□□□ 0.35
TMEM38A-201ENST00000187762 SH2B1Q9NRF2 756 aaPredicted RBP17.21■□□□□ 0.35
TMEM38A-201ENST00000187762 GRM8O00222 908 aa17.21■□□□□ 0.35
TMEM38A-201ENST00000187762 SASH1O94885 1247 aa17.21■□□□□ 0.35
TMEM38A-201ENST00000187762 KCNJ6P48051 423 aa17.21■□□□□ 0.35
TMEM38A-201ENST00000187762 STX1AQ16623 288 aa17.21■□□□□ 0.35
TMEM38A-201ENST00000187762 LRRFIP1Q32MZ4 808 aaKnown RBP17.21■□□□□ 0.35
TMEM38A-201ENST00000187762 NBPF11Q86T75 865 aa17.21■□□□□ 0.35
TMEM38A-201ENST00000187762 PGBD1Q96JS3 809 aa17.21■□□□□ 0.35
TMEM38A-201ENST00000187762 JAKMIP1Q96N16 626 aaKnown RBP17.21■□□□□ 0.35
TMEM38A-201ENST00000187762 ZSCAN16Q9H4T2 348 aaPredicted RBP17.21■□□□□ 0.35
TMEM38A-201ENST00000187762 TLR7Q9NYK1 1049 aaKnown RBP17.21■□□□□ 0.35
TMEM38A-201ENST00000187762 BCCIPQ9P287 314 aaKnown RBP eCLIP17.21■□□□□ 0.35
TMEM38A-201ENST00000187762 URI1O94763 535 aaPredicted RBP17.2■□□□□ 0.34
TMEM38A-201ENST00000187762 TRHP20396 242 aaPredicted RBP17.2■□□□□ 0.34
TMEM38A-201ENST00000187762 DHX40Q8IX18 779 aaKnown RBP17.2■□□□□ 0.34
TMEM38A-201ENST00000187762 KLHDC4Q8TBB5 520 aa17.2■□□□□ 0.34
TMEM38A-201ENST00000187762 CARD10Q9BWT7 1032 aa17.2■□□□□ 0.34
TMEM38A-201ENST00000187762 IMPACTQ9P2X3 320 aa17.2■□□□□ 0.34
TMEM38A-201ENST00000187762 ZC3H6P61129 1189 aaKnown RBP17.2■□□□□ 0.34
TMEM38A-201ENST00000187762 COL9A3Q14050 684 aaPredicted RBP17.2■□□□□ 0.34
TMEM38A-201ENST00000187762 GPR161Q8N6U8 529 aaKnown RBP17.2■□□□□ 0.34
TMEM38A-201ENST00000187762 EAF2Q96CJ1 260 aaPredicted RBP17.2■□□□□ 0.34
TMEM38A-201ENST00000187762 FAM227BQ96M60 508 aa17.2■□□□□ 0.34
TMEM38A-201ENST00000187762 PDIA6Q15084 440 aa17.19■□□□□ 0.34
TMEM38A-201ENST00000187762 MMS22LQ6ZRQ5 1243 aa17.19■□□□□ 0.34
TMEM38A-201ENST00000187762 CCDC150Q8NCX0 1101 aa17.19■□□□□ 0.34
TMEM38A-201ENST00000187762 LINS1Q8NG48 757 aa17.19■□□□□ 0.34
TMEM38A-201ENST00000187762 C5P01031 1676 aa17.19■□□□□ 0.34
TMEM38A-201ENST00000187762 CPP00450 1065 aa17.19■□□□□ 0.34
TMEM38A-201ENST00000187762 MYL6BP14649 208 aa17.19■□□□□ 0.34
TMEM38A-201ENST00000187762 ARMCX5Q6P1M9 558 aa17.19■□□□□ 0.34
TMEM38A-201ENST00000187762 NECAB1Q8N987 351 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms