RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 MICU3Q86XE3 530 aa14.13□□□□□ -0.15
CHPF2-201ENST00000035307 IBTKQ9P2D0 1353 aaPredicted RBP14.13□□□□□ -0.15
CHPF2-201ENST00000035307 PHKA1P46020 1223 aa14.13□□□□□ -0.15
CHPF2-201ENST00000035307 CTSWP56202 376 aa14.13□□□□□ -0.15
CHPF2-201ENST00000035307 MAP3K11Q16584 847 aa14.13□□□□□ -0.15
CHPF2-201ENST00000035307 UQCRHLA0A096LP55 91 aa14.13□□□□□ -0.15
CHPF2-201ENST00000035307 ZNF213O14771 459 aa14.13□□□□□ -0.15
CHPF2-201ENST00000035307 UQCRHP07919 91 aa14.13□□□□□ -0.15
CHPF2-201ENST00000035307 ZBTB38Q8NAP3 1195 aaPredicted RBP14.13□□□□□ -0.15
CHPF2-201ENST00000035307 IMMTQ16891 758 aaKnown RBP14.12□□□□□ -0.15
CHPF2-201ENST00000035307 HSP90AA4PQ58FG1 418 aa14.12□□□□□ -0.15
CHPF2-201ENST00000035307 KRT27Q7Z3Y8 459 aa14.12□□□□□ -0.15
CHPF2-201ENST00000035307 GAS2L3Q86XJ1 694 aa14.12□□□□□ -0.15
CHPF2-201ENST00000035307 TRIM34Q9BYJ4 488 aa14.12□□□□□ -0.15
CHPF2-201ENST00000035307 TTC12Q9H892 705 aaPredicted RBP14.12□□□□□ -0.15
CHPF2-201ENST00000035307 USP5P45974 858 aa14.12□□□□□ -0.15
CHPF2-201ENST00000035307 CCDC34Q96HJ3 373 aa14.12□□□□□ -0.15
CHPF2-201ENST00000035307 GJD4Q96KN9 370 aaPredicted RBP14.12□□□□□ -0.15
CHPF2-201ENST00000035307 NEK1Q96PY6 1258 aa14.12□□□□□ -0.15
CHPF2-201ENST00000035307 ZSCAN22P10073 491 aaPredicted RBP14.12□□□□□ -0.15
CHPF2-201ENST00000035307 GADD45BO75293 160 aaPredicted RBP14.11□□□□□ -0.15
CHPF2-201ENST00000035307 GOLGA8BA8MQT2 603 aa14.11□□□□□ -0.15
CHPF2-201ENST00000035307 MCMDC2Q4G0Z9 681 aa14.11□□□□□ -0.15
CHPF2-201ENST00000035307 CCDC183Q5T5S1 534 aa14.11□□□□□ -0.15
CHPF2-201ENST00000035307 RASEFQ8IZ41 740 aa14.11□□□□□ -0.15
CHPF2-201ENST00000035307 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.11□□□□□ -0.15
CHPF2-201ENST00000035307 SYT1P21579 422 aa14.11□□□□□ -0.15
CHPF2-201ENST00000035307 CREB3L3Q68CJ9 461 aa14.11□□□□□ -0.15
CHPF2-201ENST00000035307 NACAP1Q9BZK3 213 aa14.11□□□□□ -0.15
CHPF2-201ENST00000035307 RBSNQ9H1K0 784 aa14.11□□□□□ -0.15
CHPF2-201ENST00000035307 ARMT1Q9H993 441 aa14.11□□□□□ -0.15
CHPF2-201ENST00000035307 SPATA31A1Q5TZJ5 1347 aa14.11□□□□□ -0.15
CHPF2-201ENST00000035307 ADCY5O95622 1261 aa14.1□□□□□ -0.15
CHPF2-201ENST00000035307 IKQ13123 557 aaPredicted RBP14.1□□□□□ -0.15
CHPF2-201ENST00000035307 PCMTD1Q96MG8 357 aaPredicted RBP14.1□□□□□ -0.15
CHPF2-201ENST00000035307 U3KPZ7 1027 aaPredicted RBP14.1□□□□□ -0.15
CHPF2-201ENST00000035307 PICALMQ13492 652 aa14.1□□□□□ -0.15
CHPF2-201ENST00000035307 KRT32Q14532 448 aa14.1□□□□□ -0.15
CHPF2-201ENST00000035307 ZNF589Q86UQ0 364 aaPredicted RBP14.1□□□□□ -0.15
CHPF2-201ENST00000035307 AMOTL1Q8IY63 956 aa14.1□□□□□ -0.15
CHPF2-201ENST00000035307 CEMIPQ8WUJ3 1361 aa14.1□□□□□ -0.15
CHPF2-201ENST00000035307 Q6ZUG5 572 aa14.1□□□□□ -0.15
CHPF2-201ENST00000035307 SGSM2O43147 1006 aa14.09□□□□□ -0.15
CHPF2-201ENST00000035307 ZNF396Q96N95 335 aaPredicted RBP14.09□□□□□ -0.15
CHPF2-201ENST00000035307 NCOA5Q9HCD5 579 aaKnown RBP14.09□□□□□ -0.15
CHPF2-201ENST00000035307 SLC4A4Q9Y6R1 1079 aa14.09□□□□□ -0.15
CHPF2-201ENST00000035307 KIF20BQ96Q89 1820 aa14.09□□□□□ -0.15
CHPF2-201ENST00000035307 MBD4O95243 580 aa14.09□□□□□ -0.15
CHPF2-201ENST00000035307 IL6STP40189 918 aaPredicted RBP14.09□□□□□ -0.15
CHPF2-201ENST00000035307 KDM6AO15550 1401 aaPredicted RBP14.09□□□□□ -0.15
CHPF2-201ENST00000035307 CCDC69A6NI79 296 aa14.09□□□□□ -0.15
CHPF2-201ENST00000035307 ST5P78524 1137 aa14.09□□□□□ -0.15
CHPF2-201ENST00000035307 APOBRQ0VD83 1088 aa14.09□□□□□ -0.15
CHPF2-201ENST00000035307 ADCK5Q3MIX3 580 aa14.09□□□□□ -0.15
CHPF2-201ENST00000035307 SH2B1Q9NRF2 756 aaPredicted RBP14.09□□□□□ -0.15
CHPF2-201ENST00000035307 PCCAP05165 728 aaPredicted RBP14.08□□□□□ -0.15
CHPF2-201ENST00000035307 SART3Q15020 963 aaKnown RBP14.08□□□□□ -0.15
CHPF2-201ENST00000035307 TTLL11Q8NHH1 800 aa14.08□□□□□ -0.15
CHPF2-201ENST00000035307 UBAC1Q9BSL1 405 aa14.08□□□□□ -0.15
CHPF2-201ENST00000035307 DACT1Q9NYF0 836 aa14.08□□□□□ -0.15
CHPF2-201ENST00000035307 SNX14Q9Y5W7 946 aa14.08□□□□□ -0.15
CHPF2-201ENST00000035307 C8orf76Q96K31 380 aa14.08□□□□□ -0.16
CHPF2-201ENST00000035307 TRMT1Q9NXH9 659 aaKnown RBP14.08□□□□□ -0.16
CHPF2-201ENST00000035307 TTC41PQ6P2S7 1318 aa14.08□□□□□ -0.16
CHPF2-201ENST00000035307 IFIT3O14879 490 aaKnown RBP14.08□□□□□ -0.16
CHPF2-201ENST00000035307 UFL1O94874 794 aa14.08□□□□□ -0.16
CHPF2-201ENST00000035307 TBC1D9BQ66K14 1250 aa14.08□□□□□ -0.16
CHPF2-201ENST00000035307 C17orf53Q8N3J3 647 aaPredicted RBP14.08□□□□□ -0.16
CHPF2-201ENST00000035307 ZBTB9Q96C00 473 aa14.08□□□□□ -0.16
CHPF2-201ENST00000035307 MYL10Q9BUA6 226 aa14.08□□□□□ -0.16
CHPF2-201ENST00000035307 ZSCAN25Q6NSZ9 544 aa14.07□□□□□ -0.16
CHPF2-201ENST00000035307 KAZALD1Q96I82 304 aa14.07□□□□□ -0.16
CHPF2-201ENST00000035307 IL25Q9H293 177 aa14.07□□□□□ -0.16
CHPF2-201ENST00000035307 CCDC171Q6TFL3 1326 aa14.07□□□□□ -0.16
CHPF2-201ENST00000035307 MPHOSPH10O00566 681 aaKnown RBP14.07□□□□□ -0.16
CHPF2-201ENST00000035307 SERPINC1P01008 464 aa14.07□□□□□ -0.16
CHPF2-201ENST00000035307 RPS8P62241 208 aaKnown RBP14.07□□□□□ -0.16
CHPF2-201ENST00000035307 RBM26Q5T8P6 1007 aaKnown RBP14.07□□□□□ -0.16
CHPF2-201ENST00000035307 OTUD7BQ6GQQ9 843 aa14.07□□□□□ -0.16
CHPF2-201ENST00000035307 SLC4A9Q96Q91 983 aa14.07□□□□□ -0.16
CHPF2-201ENST00000035307 RNF113AO15541 343 aaKnown RBP14.07□□□□□ -0.16
CHPF2-201ENST00000035307 LRSAM1Q6UWE0 723 aa14.07□□□□□ -0.16
CHPF2-201ENST00000035307 CFAP45Q9UL16 551 aa14.07□□□□□ -0.16
CHPF2-201ENST00000035307 LETM1O95202 739 aaPredicted RBP14.07□□□□□ -0.16
CHPF2-201ENST00000035307 F13A1P00488 732 aa14.07□□□□□ -0.16
CHPF2-201ENST00000035307 CHRNDQ07001 517 aa14.07□□□□□ -0.16
CHPF2-201ENST00000035307 CCDC102BQ68D86 513 aa14.07□□□□□ -0.16
CHPF2-201ENST00000035307 FSIP1Q8NA03 581 aa14.07□□□□□ -0.16
CHPF2-201ENST00000035307 C16orf45Q96MC5 204 aaPredicted RBP14.07□□□□□ -0.16
CHPF2-201ENST00000035307 COPRSQ9NQ92 184 aa14.07□□□□□ -0.16
CHPF2-201ENST00000035307 KLHL10Q6JEL2 608 aa14.06□□□□□ -0.16
CHPF2-201ENST00000035307 NAA16Q6N069 864 aaPredicted RBP14.06□□□□□ -0.16
CHPF2-201ENST00000035307 ARHGEF1Q92888 912 aaKnown RBP14.06□□□□□ -0.16
CHPF2-201ENST00000035307 SAP30BPQ9UHR5 308 aaKnown RBP14.06□□□□□ -0.16
CHPF2-201ENST00000035307 H7C1W4 665 aa14.06□□□□□ -0.16
CHPF2-201ENST00000035307 ERCC4Q92889 916 aaPredicted RBP14.06□□□□□ -0.16
CHPF2-201ENST00000035307 TMX1Q9H3N1 280 aa14.06□□□□□ -0.16
CHPF2-201ENST00000035307 MKNK2Q9HBH9 465 aa14.06□□□□□ -0.16
CHPF2-201ENST00000035307 VAT1LQ9HCJ6 419 aa14.06□□□□□ -0.16
CHPF2-201ENST00000035307 TMEM63CQ9P1W3 806 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms