RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 TAOK2Q9UL54 1235 aa12.29□□□□□ -0.44
CX3CL1-201ENST00000006053 NEMFO60524 1076 aa12.29□□□□□ -0.44
CX3CL1-201ENST00000006053 CTDNEP1O95476 244 aa12.29□□□□□ -0.44
CX3CL1-201ENST00000006053 IRX5P78411 483 aaPredicted RBP12.29□□□□□ -0.44
CX3CL1-201ENST00000006053 SNW1Q13573 536 aaKnown RBP12.29□□□□□ -0.44
CX3CL1-201ENST00000006053 ZRSR1Q15695 479 aaKnown RBP12.29□□□□□ -0.44
CX3CL1-201ENST00000006053 DHX32Q7L7V1 743 aaKnown RBP12.29□□□□□ -0.44
CX3CL1-201ENST00000006053 DHX40Q8IX18 779 aaKnown RBP12.29□□□□□ -0.44
CX3CL1-201ENST00000006053 ZBTB9Q96C00 473 aa12.29□□□□□ -0.44
CX3CL1-201ENST00000006053 SYTL4Q96C24 671 aaPredicted RBP12.29□□□□□ -0.44
CX3CL1-201ENST00000006053 A0A0G2JLW4 131 aa12.28□□□□□ -0.44
CX3CL1-201ENST00000006053 GOLIM4O00461 696 aa12.28□□□□□ -0.44
CX3CL1-201ENST00000006053 GCP02774 474 aa12.28□□□□□ -0.44
CX3CL1-201ENST00000006053 FMNL2Q96PY5 1086 aa12.28□□□□□ -0.44
CX3CL1-201ENST00000006053 COPRSQ9NQ92 184 aa12.28□□□□□ -0.44
CX3CL1-201ENST00000006053 JCADQ9P266 1359 aa12.28□□□□□ -0.44
CX3CL1-201ENST00000006053 A0A1B0GVL5 298 aa12.28□□□□□ -0.44
CX3CL1-201ENST00000006053 FAM160A1Q05DH4 1040 aa12.28□□□□□ -0.44
CX3CL1-201ENST00000006053 NAA16Q6N069 864 aaPredicted RBP12.28□□□□□ -0.44
CX3CL1-201ENST00000006053 METTL22Q9BUU2 404 aaPredicted RBP12.28□□□□□ -0.44
CX3CL1-201ENST00000006053 DDX41Q9UJV9 622 aaKnown RBP12.28□□□□□ -0.44
CX3CL1-201ENST00000006053 MARF1Q9Y4F3 1742 aaKnown RBP12.28□□□□□ -0.44
CX3CL1-201ENST00000006053 LTN1O94822 1766 aa12.28□□□□□ -0.44
CX3CL1-201ENST00000006053 RBM6P78332 1123 aaKnown RBP12.27□□□□□ -0.44
CX3CL1-201ENST00000006053 CCZ1BP86790 482 aa12.27□□□□□ -0.44
CX3CL1-201ENST00000006053 CCZ1P86791 482 aaPredicted RBP12.27□□□□□ -0.44
CX3CL1-201ENST00000006053 SF3A1Q15459 793 aaKnown RBP12.27□□□□□ -0.44
CX3CL1-201ENST00000006053 OTUD7BQ6GQQ9 843 aa12.27□□□□□ -0.44
CX3CL1-201ENST00000006053 ZNF790Q6PG37 636 aa12.27□□□□□ -0.44
CX3CL1-201ENST00000006053 ANKRD13DQ6ZTN6 518 aa12.27□□□□□ -0.44
CX3CL1-201ENST00000006053 LLPHQ9BRT6 129 aaKnown RBP12.27□□□□□ -0.44
CX3CL1-201ENST00000006053 SMC2O95347 1197 aa12.27□□□□□ -0.45
CX3CL1-201ENST00000006053 ELF2Q15723 593 aa12.27□□□□□ -0.45
CX3CL1-201ENST00000006053 CNPY4Q8N129 248 aa12.27□□□□□ -0.45
CX3CL1-201ENST00000006053 HEG1Q9ULI3 1381 aa12.27□□□□□ -0.45
CX3CL1-201ENST00000006053 CCAR2Q8N163 923 aaKnown RBP12.27□□□□□ -0.45
CX3CL1-201ENST00000006053 RGS22Q8NE09 1264 aa12.27□□□□□ -0.45
CX3CL1-201ENST00000006053 KIF18AQ8NI77 898 aa12.27□□□□□ -0.45
CX3CL1-201ENST00000006053 HAUS7Q99871 368 aa12.27□□□□□ -0.45
CX3CL1-201ENST00000006053 A0A087WZG4 1122 aa12.26□□□□□ -0.45
CX3CL1-201ENST00000006053 BIN1O00499 593 aa12.26□□□□□ -0.45
CX3CL1-201ENST00000006053 RFX5P48382 616 aaPredicted RBP12.26□□□□□ -0.45
CX3CL1-201ENST00000006053 KMT5BQ4FZB7 885 aa12.26□□□□□ -0.45
CX3CL1-201ENST00000006053 NFATC2IPQ8NCF5 419 aa12.26□□□□□ -0.45
CX3CL1-201ENST00000006053 ORAI2Q96SN7 254 aa12.26□□□□□ -0.45
CX3CL1-201ENST00000006053 NAT10Q9H0A0 1025 aaKnown RBP12.26□□□□□ -0.45
CX3CL1-201ENST00000006053 RGPD2P0DJD1 1756 aa12.26□□□□□ -0.45
CX3CL1-201ENST00000006053 SLIT1O75093 1534 aa12.26□□□□□ -0.45
CX3CL1-201ENST00000006053 POLR3DP05423 398 aaPredicted RBP12.26□□□□□ -0.45
CX3CL1-201ENST00000006053 HMGB1P09429 215 aaKnown RBP12.26□□□□□ -0.45
CX3CL1-201ENST00000006053 NYAP1Q6ZVC0 841 aa12.26□□□□□ -0.45
CX3CL1-201ENST00000006053 KBTBD3Q8NAB2 608 aa12.26□□□□□ -0.45
CX3CL1-201ENST00000006053 ENGASEQ8NFI3 743 aa12.26□□□□□ -0.45
CX3CL1-201ENST00000006053 PCDHA7Q9UN72 937 aa12.26□□□□□ -0.45
CX3CL1-201ENST00000006053 STK38Q15208 465 aa12.26□□□□□ -0.45
CX3CL1-201ENST00000006053 ZNF397Q8NF99 534 aaPredicted RBP12.26□□□□□ -0.45
CX3CL1-201ENST00000006053 MRPS27Q92552 414 aaKnown RBP12.26□□□□□ -0.45
CX3CL1-201ENST00000006053 AXIN2Q9Y2T1 843 aa12.26□□□□□ -0.45
CX3CL1-201ENST00000006053 TIMM10P62072 90 aa12.25□□□□□ -0.45
CX3CL1-201ENST00000006053 TMC6Q7Z403 805 aa12.25□□□□□ -0.45
CX3CL1-201ENST00000006053 ARHGEF25Q86VW2 580 aa12.25□□□□□ -0.45
CX3CL1-201ENST00000006053 RAB11FIP4Q86YS3 637 aa12.25□□□□□ -0.45
CX3CL1-201ENST00000006053 E7EWF7 191 aa12.25□□□□□ -0.45
CX3CL1-201ENST00000006053 LMBR1LQ6UX01 489 aa12.25□□□□□ -0.45
CX3CL1-201ENST00000006053 ZNF496Q96IT1 587 aaPredicted RBP12.25□□□□□ -0.45
CX3CL1-201ENST00000006053 GPHNQ9NQX3 736 aaPredicted RBP12.25□□□□□ -0.45
CX3CL1-201ENST00000006053 PDIA3P30101 505 aaKnown RBP12.24□□□□□ -0.45
CX3CL1-201ENST00000006053 NDUFA8P51970 172 aa12.24□□□□□ -0.45
CX3CL1-201ENST00000006053 DPCR1Q3MIW9 517 aa12.24□□□□□ -0.45
CX3CL1-201ENST00000006053 TTLL5Q6EMB2 1281 aa12.24□□□□□ -0.45
CX3CL1-201ENST00000006053 ISM2Q6H9L7 571 aa12.24□□□□□ -0.45
CX3CL1-201ENST00000006053 FBXO38Q6PIJ6 1188 aa12.24□□□□□ -0.45
CX3CL1-201ENST00000006053 ILDR1Q86SU0 546 aaPredicted RBP12.24□□□□□ -0.45
CX3CL1-201ENST00000006053 IFNKQ9P0W0 207 aa12.24□□□□□ -0.45
CX3CL1-201ENST00000006053 SLU7O95391 586 aaKnown RBP12.24□□□□□ -0.45
CX3CL1-201ENST00000006053 CHMP4CQ96CF2 233 aa12.24□□□□□ -0.45
CX3CL1-201ENST00000006053 ERO1AQ96HE7 468 aa12.24□□□□□ -0.45
CX3CL1-201ENST00000006053 PAG1Q9NWQ8 432 aa12.24□□□□□ -0.45
CX3CL1-201ENST00000006053 NCAPD2Q15021 1401 aa12.24□□□□□ -0.45
CX3CL1-201ENST00000006053 NFAT5O94916 1531 aa12.24□□□□□ -0.45
CX3CL1-201ENST00000006053 ZC3H6P61129 1189 aaKnown RBP12.24□□□□□ -0.45
CX3CL1-201ENST00000006053 KRT222Q8N1A0 295 aa12.24□□□□□ -0.45
CX3CL1-201ENST00000006053 XPO4Q9C0E2 1151 aaKnown RBP12.24□□□□□ -0.45
CX3CL1-201ENST00000006053 MORC2Q9Y6X9 1032 aaPredicted RBP12.24□□□□□ -0.45
CX3CL1-201ENST00000006053 HSPD1P10809 573 aaKnown RBP12.23□□□□□ -0.45
CX3CL1-201ENST00000006053 GSDMDP57764 484 aa12.23□□□□□ -0.45
CX3CL1-201ENST00000006053 HAND2P61296 217 aa12.23□□□□□ -0.45
CX3CL1-201ENST00000006053 EXOSC10Q01780 885 aaKnown RBP12.23□□□□□ -0.45
CX3CL1-201ENST00000006053 NBPF11Q86T75 865 aa12.23□□□□□ -0.45
CX3CL1-201ENST00000006053 FMR1NBQ8N0W7 255 aaPredicted RBP12.23□□□□□ -0.45
CX3CL1-201ENST00000006053 RAPGEF4Q8WZA2 1011 aa12.23□□□□□ -0.45
CX3CL1-201ENST00000006053 NLRP2Q9NX02 1062 aa12.23□□□□□ -0.45
CX3CL1-201ENST00000006053 CLIC4Q9Y696 253 aa12.23□□□□□ -0.45
CX3CL1-201ENST00000006053 ARHGAP23Q9P227 1491 aa12.23□□□□□ -0.45
CX3CL1-201ENST00000006053 GORABQ5T7V8 394 aa12.23□□□□□ -0.45
CX3CL1-201ENST00000006053 SYT10Q6XYQ8 523 aa12.23□□□□□ -0.45
CX3CL1-201ENST00000006053 TTC5Q8N0Z6 440 aa12.23□□□□□ -0.45
CX3CL1-201ENST00000006053 GABPB1Q06547 395 aaPredicted RBP12.22□□□□□ -0.45
CX3CL1-201ENST00000006053 SLC52A2Q9HAB3 445 aa12.22□□□□□ -0.45
CX3CL1-201ENST00000006053 GJB4Q9NTQ9 266 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms