RNA–Protein interactions for RNA: ENSMUST00000225319.1

Ssr1-204, Transcript of Translocon-associated protein subunit alpha, mousemouse

BASIC

Gene Ssr1, Length 1,610 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1-204ENSMUST00000225319 Prdm11A2AGX3 565 aa17.04■□□□□ 0.32
Ssr1-204ENSMUST00000225319 Eva1cP58659 440 aa17.04■□□□□ 0.32
Ssr1-204ENSMUST00000225319 Utp18Q5SSI6 552 aaKnown RBP17.04■□□□□ 0.32
Ssr1-204ENSMUST00000225319 Ints3Q7TPD0 1041 aaKnown RBP17.04■□□□□ 0.32
Ssr1-204ENSMUST00000225319 Sgsm2Q80U12 1005 aa17.04■□□□□ 0.32
Ssr1-204ENSMUST00000225319 HdlbpQ8VDJ3 1268 aaKnown RBP17.04■□□□□ 0.32
Ssr1-204ENSMUST00000225319 Adarb2Q9JI20 745 aa17.04■□□□□ 0.32
Ssr1-204ENSMUST00000225319 Map3k15A2AQW0 1331 aa17.04■□□□□ 0.32
Ssr1-204ENSMUST00000225319 Sned1Q70E20 1403 aa17.04■□□□□ 0.32
Ssr1-204ENSMUST00000225319 Togaram1Q6A070 1776 aaKnown RBP17.04■□□□□ 0.32
Ssr1-204ENSMUST00000225319 Fbxl16A2RT62 479 aa17.03■□□□□ 0.32
Ssr1-204ENSMUST00000225319 Gm7347D3YYI9 267 aa17.03■□□□□ 0.32
Ssr1-204ENSMUST00000225319 Speer4aF8VPX6 267 aa17.03■□□□□ 0.32
Ssr1-204ENSMUST00000225319 SlkO54988 1233 aa17.03■□□□□ 0.32
Ssr1-204ENSMUST00000225319 EvcP57680 1005 aa17.03■□□□□ 0.32
Ssr1-204ENSMUST00000225319 Apba2P98084 750 aa17.03■□□□□ 0.32
Ssr1-204ENSMUST00000225319 Pdzrn3Q69ZS0 1063 aa17.03■□□□□ 0.32
Ssr1-204ENSMUST00000225319 Atxn2lQ7TQH0 1049 aaKnown RBP17.03■□□□□ 0.32
Ssr1-204ENSMUST00000225319 Strip1Q8C079 837 aa17.03■□□□□ 0.32
Ssr1-204ENSMUST00000225319 Glipr1l2Q9CQ35 332 aa17.03■□□□□ 0.32
Ssr1-204ENSMUST00000225319 Naa16Q9DBB4 864 aa17.03■□□□□ 0.32
Ssr1-204ENSMUST00000225319 Phactr2B1AVP0 632 aa17.03■□□□□ 0.32
Ssr1-204ENSMUST00000225319 Hap1O35668 628 aa17.03■□□□□ 0.32
Ssr1-204ENSMUST00000225319 Il15P48346 162 aa17.03■□□□□ 0.32
Ssr1-204ENSMUST00000225319 Rnf20Q5DTM8 973 aa17.03■□□□□ 0.32
Ssr1-204ENSMUST00000225319 Ltv1Q6NSQ7 470 aaKnown RBP17.03■□□□□ 0.32
Ssr1-204ENSMUST00000225319 Ufl1Q8CCJ3 793 aaKnown RBP17.03■□□□□ 0.32
Ssr1-204ENSMUST00000225319 Osbpl5Q9ER64 874 aa17.03■□□□□ 0.32
Ssr1-204ENSMUST00000225319 Pus3Q9JI38 481 aa17.03■□□□□ 0.32
Ssr1-204ENSMUST00000225319 Rbbp6P97868 1790 aaKnown RBP17.02■□□□□ 0.32
Ssr1-204ENSMUST00000225319 Myh4Q5SX39 1939 aa17.02■□□□□ 0.32
Ssr1-204ENSMUST00000225319 Atf7Q8R0S1 413 aa17.02■□□□□ 0.31
Ssr1-204ENSMUST00000225319 Appbp2Q9DAX9 585 aa17.02■□□□□ 0.31
Ssr1-204ENSMUST00000225319 Trim44Q9QXA7 346 aa17.02■□□□□ 0.31
Ssr1-204ENSMUST00000225319 Ugt1a5B2RT14 529 aa17.01■□□□□ 0.31
Ssr1-204ENSMUST00000225319 1700006A11RikB9EHI3 544 aa17.01■□□□□ 0.31
Ssr1-204ENSMUST00000225319 Oas2E9Q9A9 742 aa17.01■□□□□ 0.31
Ssr1-204ENSMUST00000225319 Rhbdl3P58873 404 aa17.01■□□□□ 0.31
Ssr1-204ENSMUST00000225319 Kank4Q6P9J5 1016 aa17.01■□□□□ 0.31
Ssr1-204ENSMUST00000225319 CpzQ8R4V4 654 aa17.01■□□□□ 0.31
Ssr1-204ENSMUST00000225319 Sh3bp5lQ99LH9 392 aa17.01■□□□□ 0.31
Ssr1-204ENSMUST00000225319 Slx4ipQ9D7Y9 413 aa17.01■□□□□ 0.31
Ssr1-204ENSMUST00000225319 StrcQ8VIM6 1809 aa17.01■□□□□ 0.31
Ssr1-204ENSMUST00000225319 EvplQ9D952 2035 aa17■□□□□ 0.31
Ssr1-204ENSMUST00000225319 Jdp2P97875 163 aa17■□□□□ 0.31
Ssr1-204ENSMUST00000225319 Gjb2Q00977 226 aa17■□□□□ 0.31
Ssr1-204ENSMUST00000225319 Usp44Q8C2S0 711 aa17■□□□□ 0.31
Ssr1-204ENSMUST00000225319 Rbm17Q8JZX4 405 aaKnown RBP17■□□□□ 0.31
Ssr1-204ENSMUST00000225319 Dydc2Q9D3X8 139 aa17■□□□□ 0.31
Ssr1-204ENSMUST00000225319 Popdc2Q9ES82 367 aa17■□□□□ 0.31
Ssr1-204ENSMUST00000225319 IncenpQ9WU62 880 aa17■□□□□ 0.31
Ssr1-204ENSMUST00000225319 Mroh6V9GX81 722 aa17■□□□□ 0.31
Ssr1-204ENSMUST00000225319 IntuQ059U7 942 aa16.99■□□□□ 0.31
Ssr1-204ENSMUST00000225319 1810065E05RikQ5NC41 235 aa16.99■□□□□ 0.31
Ssr1-204ENSMUST00000225319 Edrf1Q6GQV7 1239 aa16.99■□□□□ 0.31
Ssr1-204ENSMUST00000225319 St5Q924W7 1134 aa16.99■□□□□ 0.31
Ssr1-204ENSMUST00000225319 Gtf2a1Q99PM3 378 aa16.99■□□□□ 0.31
Ssr1-204ENSMUST00000225319 CpvlQ9D3S9 478 aa16.99■□□□□ 0.31
Ssr1-204ENSMUST00000225319 Tti2Q8BGV4 512 aa16.99■□□□□ 0.31
Ssr1-204ENSMUST00000225319 Lrrfip2Q91WK0 415 aa16.99■□□□□ 0.31
Ssr1-204ENSMUST00000225319 ParvgQ9ERD8 331 aa16.99■□□□□ 0.31
Ssr1-204ENSMUST00000225319 Nup188Q6ZQH8 1759 aa16.99■□□□□ 0.31
Ssr1-204ENSMUST00000225319 Celf1P28659 486 aaKnown RBP16.98■□□□□ 0.31
Ssr1-204ENSMUST00000225319 Hspd1P63038 573 aaKnown RBP16.98■□□□□ 0.31
Ssr1-204ENSMUST00000225319 Ptcd1Q8C2E4 695 aaKnown RBP16.98■□□□□ 0.31
Ssr1-204ENSMUST00000225319 AidaQ8C4Q6 305 aa16.98■□□□□ 0.31
Ssr1-204ENSMUST00000225319 Cchcr1Q8K2I2 770 aa16.98■□□□□ 0.31
Ssr1-204ENSMUST00000225319 Emilin1Q99K41 1017 aa16.98■□□□□ 0.31
Ssr1-204ENSMUST00000225319 UvssaQ9D479 717 aa16.98■□□□□ 0.31
Ssr1-204ENSMUST00000225319 4931400O07RikQ9D4M5 137 aa16.98■□□□□ 0.31
Ssr1-204ENSMUST00000225319 Psma5Q9Z2U1 241 aaKnown RBP16.98■□□□□ 0.31
Ssr1-204ENSMUST00000225319 Col4a5Q63ZW6 1691 aa16.97■□□□□ 0.31
Ssr1-204ENSMUST00000225319 Izumo3A6PWV3 263 aa16.97■□□□□ 0.31
Ssr1-204ENSMUST00000225319 Ccdc6D3YZP9 469 aa16.97■□□□□ 0.31
Ssr1-204ENSMUST00000225319 Slurp2P0DP59 97 aa16.97■□□□□ 0.31
Ssr1-204ENSMUST00000225319 Bend4P86174 541 aa16.97■□□□□ 0.31
Ssr1-204ENSMUST00000225319 Sp8Q8BMJ8 486 aa16.97■□□□□ 0.31
Ssr1-204ENSMUST00000225319 Adam1bQ8R534 806 aa16.97■□□□□ 0.31
Ssr1-204ENSMUST00000225319 FliiQ9JJ28 1271 aa16.97■□□□□ 0.31
Ssr1-204ENSMUST00000225319 Ltn1Q6A009 1767 aa16.97■□□□□ 0.31
Ssr1-204ENSMUST00000225319 Carmil3Q3UFQ8 1375 aa16.97■□□□□ 0.31
Ssr1-204ENSMUST00000225319 Sik3Q6P4S6 1311 aa16.97■□□□□ 0.31
Ssr1-204ENSMUST00000225319 Atp6v0a2P15920 856 aa16.96■□□□□ 0.31
Ssr1-204ENSMUST00000225319 PtmaP26350 111 aa16.96■□□□□ 0.31
Ssr1-204ENSMUST00000225319 Psd3Q2PFD7 1037 aa16.96■□□□□ 0.31
Ssr1-204ENSMUST00000225319 Ube3cQ80U95 1083 aa16.96■□□□□ 0.31
Ssr1-204ENSMUST00000225319 Trim56Q80VI1 734 aaKnown RBP16.96■□□□□ 0.31
Ssr1-204ENSMUST00000225319 HlfQ8BW74 295 aa16.96■□□□□ 0.31
Ssr1-204ENSMUST00000225319 Lmbrd2Q8C561 694 aa16.96■□□□□ 0.31
Ssr1-204ENSMUST00000225319 Polr3dQ91WD1 398 aa16.96■□□□□ 0.31
Ssr1-204ENSMUST00000225319 Ankrd63A2ARS0 390 aa16.96■□□□□ 0.3
Ssr1-204ENSMUST00000225319 Slc7a3P70423 618 aa16.96■□□□□ 0.3
Ssr1-204ENSMUST00000225319 Q9D9S1 216 aa16.96■□□□□ 0.3
Ssr1-204ENSMUST00000225319 Slfn1Q9Z0I7 337 aa16.96■□□□□ 0.3
Ssr1-204ENSMUST00000225319 Myh13B1AR69 1938 aa16.95■□□□□ 0.3
Ssr1-204ENSMUST00000225319 Vsig10D3YX43 558 aa16.95■□□□□ 0.3
Ssr1-204ENSMUST00000225319 Prl7d1P04769 244 aa16.95■□□□□ 0.3
Ssr1-204ENSMUST00000225319 Kif4P33174 1231 aa16.95■□□□□ 0.3
Ssr1-204ENSMUST00000225319 PogkQ80TC5 607 aa16.95■□□□□ 0.3
Ssr1-204ENSMUST00000225319 Alx1Q8C8B0 326 aa16.95■□□□□ 0.3
Retrieved 100 of 22,080 RNA–protein pairs in 72.1 ms