RNA–Protein interactions for RNA: ENSMUST00000116359.2

Ctc1-202, Transcript of CST complex subunit CTC1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ctc1, Length 3,978 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctc1-202ENSMUST00000116359 Iqcb1Q8BP00 598 aa11.74□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Osbpl1aQ91XL9 950 aa11.74□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Lztr1Q9CQ33 837 aa11.74□□□□□ -0.53
Ctc1-202ENSMUST00000116359 ZwintQ9CQU5 252 aa11.74□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Sos1Q62245 1319 aa11.73□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Ppp2r2cQ8BG02 447 aa11.73□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Hpcal4Q8BGZ1 191 aa11.73□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Ano1Q8BHY3 960 aa11.73□□□□□ -0.53
Ctc1-202ENSMUST00000116359 R3hcc1Q8BSI6 488 aa11.73□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Fbxo18Q8K2I9 1042 aa11.73□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Gnl2Q99LH1 728 aaKnown RBP11.73□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Efcab6Q6P1E8 1516 aa11.73□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Cdk12Q14AX6 1484 aaKnown RBP11.73□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Eif2ak4Q9QZ05 1648 aa11.73□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Bin1O08539 588 aaKnown RBP11.73□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Map2k1P31938 393 aa11.73□□□□□ -0.53
Ctc1-202ENSMUST00000116359 ItpripQ3TNL8 555 aa11.73□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Tmem109Q3UBX0 243 aa11.73□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Bag1Q60739 355 aa11.73□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Znf653Q6YND2 615 aa11.73□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Ccdc73Q8CDM4 1066 aa11.73□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Nek9Q8K1R7 984 aa11.73□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Flad1Q8R123 492 aa11.73□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Mkrn1Q9QXP6 481 aa11.73□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Ltbp4Q8K4G1 1666 aa11.73□□□□□ -0.53
Ctc1-202ENSMUST00000116359 HalP35492 657 aa11.73□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Ifit2Q64112 472 aa11.73□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Zfp317Q8C0Q5 607 aa11.73□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Zswim4Q8C7B8 1101 aa11.73□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Luzp1Q8R4U7 1068 aaKnown RBP11.73□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Mtmr6Q8VE11 617 aa11.73□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Kif1bQ60575 1816 aaKnown RBP11.73□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Fam107bQ3TGF2 131 aa11.72□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Wdr60Q8C761 999 aa11.72□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Trap1Q9CQN1 706 aaKnown RBP11.72□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Ccdc47Q9D024 483 aaKnown RBP11.72□□□□□ -0.53
Ctc1-202ENSMUST00000116359 NpcdF8VQB8 469 aa11.72□□□□□ -0.53
Ctc1-202ENSMUST00000116359 MmeQ61391 750 aa11.72□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Lrrc1Q80VQ1 524 aa11.72□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Klc4Q9DBS5 619 aa11.72□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Nrxn1Q9CS84 1514 aa11.72□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Ccdc12Q8R344 166 aaKnown RBP11.72□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Ribc1Q9D0B8 379 aa11.72□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Rims1Q99NE5 1463 aa11.72□□□□□ -0.53
Ctc1-202ENSMUST00000116359 ShprhQ7TPQ3 1674 aa11.71□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Kcnb1Q03717 857 aa11.71□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Serpinb6Q60854 378 aa11.71□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Ifit1Q64282 463 aa11.71□□□□□ -0.53
Ctc1-202ENSMUST00000116359 CactinQ9CS00 772 aaKnown RBP11.71□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Dnajc25A2ALW5 357 aa11.71□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Ap1g2O88512 791 aa11.71□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Nbr1P97432 988 aa11.71□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Rnf40Q3U319 1001 aa11.71□□□□□ -0.53
Ctc1-202ENSMUST00000116359 EspnlQ3UYR4 1005 aa11.71□□□□□ -0.53
Ctc1-202ENSMUST00000116359 GapdhsQ64467 440 aa11.71□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Klra5Q60652 266 aa11.71□□□□□ -0.54
Ctc1-202ENSMUST00000116359 Abcf1Q6P542 837 aaKnown RBP11.71□□□□□ -0.54
Ctc1-202ENSMUST00000116359 Naif1Q6PFD7 327 aa11.71□□□□□ -0.54
Ctc1-202ENSMUST00000116359 Acsbg1Q99PU5 721 aa11.71□□□□□ -0.54
Ctc1-202ENSMUST00000116359 SetQ9EQU5 289 aaKnown RBP11.71□□□□□ -0.54
Ctc1-202ENSMUST00000116359 Mcmdc2E9Q956 681 aa11.7□□□□□ -0.54
Ctc1-202ENSMUST00000116359 Gpatch3Q8BIY1 525 aa11.7□□□□□ -0.54
Ctc1-202ENSMUST00000116359 Cd209bQ8CJ91 325 aa11.7□□□□□ -0.54
Ctc1-202ENSMUST00000116359 Plekhg1F6S200 1446 aa11.7□□□□□ -0.54
Ctc1-202ENSMUST00000116359 Topbp1Q6ZQF0 1515 aa11.7□□□□□ -0.54
Ctc1-202ENSMUST00000116359 Plxnc1Q9QZC2 1574 aa11.7□□□□□ -0.54
Ctc1-202ENSMUST00000116359 Usp32F8VPZ3 1604 aa11.7□□□□□ -0.54
Ctc1-202ENSMUST00000116359 Gm10563F6WIE4 79 aa11.7□□□□□ -0.54
Ctc1-202ENSMUST00000116359 Slc1a4O35874 532 aa11.7□□□□□ -0.54
Ctc1-202ENSMUST00000116359 Akap2O54931 893 aa11.7□□□□□ -0.54
Ctc1-202ENSMUST00000116359 Vsnl1P62761 191 aa11.7□□□□□ -0.54
Ctc1-202ENSMUST00000116359 Specc1lQ2KN98 1118 aaKnown RBP11.7□□□□□ -0.54
Ctc1-202ENSMUST00000116359 Ddx17Q501J6 650 aaKnown RBP11.7□□□□□ -0.54
Ctc1-202ENSMUST00000116359 Foxd1Q61345 456 aa11.7□□□□□ -0.54
Ctc1-202ENSMUST00000116359 Uggt1Q6P5E4 1551 aa11.7□□□□□ -0.54
Ctc1-202ENSMUST00000116359 Gm6588E9Q3K0 461 aa11.7□□□□□ -0.54
Ctc1-202ENSMUST00000116359 Znf526Q8BI66 675 aa11.7□□□□□ -0.54
Ctc1-202ENSMUST00000116359 Brf1Q8CFK2 676 aa11.7□□□□□ -0.54
Ctc1-202ENSMUST00000116359 Rab3il1Q8VDV3 383 aa11.7□□□□□ -0.54
Ctc1-202ENSMUST00000116359 SyncQ9EPM5 470 aa11.7□□□□□ -0.54
Ctc1-202ENSMUST00000116359 Rimbp3Q3V0F0 1606 aa11.7□□□□□ -0.54
Ctc1-202ENSMUST00000116359 Kcnb2A6H8H5 907 aa11.69□□□□□ -0.54
Ctc1-202ENSMUST00000116359 Atp8b2P98199 1209 aa11.69□□□□□ -0.54
Ctc1-202ENSMUST00000116359 Tex11Q14AT2 947 aa11.69□□□□□ -0.54
Ctc1-202ENSMUST00000116359 Ctdnep1Q3TP92 244 aa11.69□□□□□ -0.54
Ctc1-202ENSMUST00000116359 Gps2Q921N8 327 aa11.69□□□□□ -0.54
Ctc1-202ENSMUST00000116359 Desi2Q9D291 194 aa11.69□□□□□ -0.54
Ctc1-202ENSMUST00000116359 Msh6P54276 1358 aaKnown RBP11.69□□□□□ -0.54
Ctc1-202ENSMUST00000116359 Ccdc112A0AUP1 442 aa11.69□□□□□ -0.54
Ctc1-202ENSMUST00000116359 Itga6Q61739 1091 aa11.69□□□□□ -0.54
Ctc1-202ENSMUST00000116359 Krt222Q8CCX5 294 aa11.69□□□□□ -0.54
Ctc1-202ENSMUST00000116359 Phc3Q8CHP6 981 aa11.69□□□□□ -0.54
Ctc1-202ENSMUST00000116359 Tgs1Q923W1 853 aa11.69□□□□□ -0.54
Ctc1-202ENSMUST00000116359 Tlr9Q9EQU3 1032 aa11.69□□□□□ -0.54
Ctc1-202ENSMUST00000116359 Gemin5Q8BX17 1502 aaKnown RBP11.69□□□□□ -0.54
Ctc1-202ENSMUST00000116359 Usp5P56399 858 aaKnown RBP11.69□□□□□ -0.54
Ctc1-202ENSMUST00000116359 Sh3gl3Q62421 347 aa11.69□□□□□ -0.54
Ctc1-202ENSMUST00000116359 Cdca8Q8BHX3 289 aa11.69□□□□□ -0.54
Ctc1-202ENSMUST00000116359 MaddQ80U28 1577 aa11.69□□□□□ -0.54
Ctc1-202ENSMUST00000116359 RictorQ6QI06 1708 aa11.69□□□□□ -0.54
Retrieved 100 of 22,080 RNA–protein pairs in 12.3 ms