RNA–Protein interactions for RNA: ENSMUST00000108661.7

Chd3-202, Transcript of Chromodomain helicase DNA-binding protein 3, mousemouse

APPRIS P2 TSL 5 BASIC

Gene Chd3, Length 7,261 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3-202ENSMUST00000108661 Nup160Q9Z0W3 1402 aaKnown RBP12.97□□□□□ -0.33
Chd3-202ENSMUST00000108661 Prl3d2F6R3P9 224 aa12.97□□□□□ -0.33
Chd3-202ENSMUST00000108661 TchpQ3TVW5 497 aa12.97□□□□□ -0.33
Chd3-202ENSMUST00000108661 Ubxn2aQ99KJ0 258 aa12.97□□□□□ -0.33
Chd3-202ENSMUST00000108661 Klhl34A2AI76 644 aa12.97□□□□□ -0.33
Chd3-202ENSMUST00000108661 Gdf11Q9Z1W4 405 aa12.97□□□□□ -0.33
Chd3-202ENSMUST00000108661 Prdm2A2A7B5 1709 aaKnown RBP12.97□□□□□ -0.33
Chd3-202ENSMUST00000108661 NmiO35309 314 aa12.97□□□□□ -0.33
Chd3-202ENSMUST00000108661 Gna11P21278 359 aa12.96□□□□□ -0.33
Chd3-202ENSMUST00000108661 Rad17Q6NXW6 688 aa12.96□□□□□ -0.33
Chd3-202ENSMUST00000108661 Ccdc129Q14B48 1034 aa12.96□□□□□ -0.33
Chd3-202ENSMUST00000108661 U2af1l4Q8BGJ9 220 aa12.96□□□□□ -0.33
Chd3-202ENSMUST00000108661 Skint5A7XUY5 1461 aa12.96□□□□□ -0.33
Chd3-202ENSMUST00000108661 Atp8b3Q6UQ17 1335 aa12.96□□□□□ -0.33
Chd3-202ENSMUST00000108661 MarcksP26645 309 aaKnown RBP12.96□□□□□ -0.33
Chd3-202ENSMUST00000108661 Krt13P08730 437 aa12.96□□□□□ -0.34
Chd3-202ENSMUST00000108661 Hdac6Q9Z2V5 1149 aa12.96□□□□□ -0.34
Chd3-202ENSMUST00000108661 PrimpolQ6P1E7 537 aa12.96□□□□□ -0.34
Chd3-202ENSMUST00000108661 Asic4Q7TNS7 539 aa12.96□□□□□ -0.34
Chd3-202ENSMUST00000108661 Kdm6aO70546 1401 aa12.95□□□□□ -0.34
Chd3-202ENSMUST00000108661 NyxP83503 476 aa12.95□□□□□ -0.34
Chd3-202ENSMUST00000108661 HelbQ6NVF4 1074 aa12.95□□□□□ -0.34
Chd3-202ENSMUST00000108661 Rtn1Q8K0T0 780 aa12.95□□□□□ -0.34
Chd3-202ENSMUST00000108661 Shtn1Q8K2Q9 631 aa12.95□□□□□ -0.34
Chd3-202ENSMUST00000108661 Luzp1Q8R4U7 1068 aaKnown RBP12.95□□□□□ -0.34
Chd3-202ENSMUST00000108661 Nxf1Q99JX7 618 aaKnown RBP12.95□□□□□ -0.34
Chd3-202ENSMUST00000108661 Adam1aQ60813 791 aa12.95□□□□□ -0.34
Chd3-202ENSMUST00000108661 Prim1P20664 417 aa12.95□□□□□ -0.34
Chd3-202ENSMUST00000108661 Stat1P42225 749 aa12.95□□□□□ -0.34
Chd3-202ENSMUST00000108661 Atp8b2P98199 1209 aa12.95□□□□□ -0.34
Chd3-202ENSMUST00000108661 Trim25Q61510 634 aaKnown RBP12.95□□□□□ -0.34
Chd3-202ENSMUST00000108661 Nop9Q8BMC4 636 aaKnown RBP12.95□□□□□ -0.34
Chd3-202ENSMUST00000108661 Ift57Q8BXG3 429 aa12.95□□□□□ -0.34
Chd3-202ENSMUST00000108661 Ppp1r9aH3BJD6 1292 aa12.95□□□□□ -0.34
Chd3-202ENSMUST00000108661 GalcP54818 684 aa12.95□□□□□ -0.34
Chd3-202ENSMUST00000108661 Cbx1P83917 185 aaKnown RBP12.95□□□□□ -0.34
Chd3-202ENSMUST00000108661 Cfap52Q5F201 620 aa12.95□□□□□ -0.34
Chd3-202ENSMUST00000108661 Skor2A7M7C7 1008 aa12.94□□□□□ -0.34
Chd3-202ENSMUST00000108661 LdhaP06151 332 aaKnown RBP12.94□□□□□ -0.34
Chd3-202ENSMUST00000108661 GabpaQ00422 454 aa12.94□□□□□ -0.34
Chd3-202ENSMUST00000108661 Jade2Q6ZQF7 829 aa12.94□□□□□ -0.34
Chd3-202ENSMUST00000108661 Wdr33Q8K4P0 1330 aaKnown RBP12.94□□□□□ -0.34
Chd3-202ENSMUST00000108661 Cyp2c68K7N6C2 491 aa12.94□□□□□ -0.34
Chd3-202ENSMUST00000108661 VrtnQ3SYK4 740 aa12.94□□□□□ -0.34
Chd3-202ENSMUST00000108661 Kif22Q3V300 660 aa12.94□□□□□ -0.34
Chd3-202ENSMUST00000108661 Acot11Q8VHQ9 594 aa12.94□□□□□ -0.34
Chd3-202ENSMUST00000108661 Ccdc85aQ5SP85 500 aa12.94□□□□□ -0.34
Chd3-202ENSMUST00000108661 Spire2Q8K1S6 718 aa12.94□□□□□ -0.34
Chd3-202ENSMUST00000108661 Krt15Q61414 452 aa12.94□□□□□ -0.34
Chd3-202ENSMUST00000108661 Bloc1s2Q9CWG9 143 aa12.94□□□□□ -0.34
Chd3-202ENSMUST00000108661 AceP09470 1312 aa12.94□□□□□ -0.34
Chd3-202ENSMUST00000108661 Nlrx1Q3TL44 975 aa12.94□□□□□ -0.34
Chd3-202ENSMUST00000108661 Mphosph8Q3TYA6 858 aaKnown RBP12.94□□□□□ -0.34
Chd3-202ENSMUST00000108661 WaplQ65Z40 1200 aaKnown RBP12.94□□□□□ -0.34
Chd3-202ENSMUST00000108661 Ccdc113Q8C5T8 377 aa12.94□□□□□ -0.34
Chd3-202ENSMUST00000108661 Ddx19aQ61655 478 aaKnown RBP12.93□□□□□ -0.34
Chd3-202ENSMUST00000108661 Emilin1Q99K41 1017 aa12.93□□□□□ -0.34
Chd3-202ENSMUST00000108661 Mast3Q3U214 1321 aa12.93□□□□□ -0.34
Chd3-202ENSMUST00000108661 Zscan29E9Q5B4 869 aa12.93□□□□□ -0.34
Chd3-202ENSMUST00000108661 Hspa1lP16627 641 aa12.93□□□□□ -0.34
Chd3-202ENSMUST00000108661 Dcaf5Q80T85 946 aa12.93□□□□□ -0.34
Chd3-202ENSMUST00000108661 Uba5Q8VE47 403 aa12.93□□□□□ -0.34
Chd3-202ENSMUST00000108661 Ssfa2Q922B9 1252 aa12.93□□□□□ -0.34
Chd3-202ENSMUST00000108661 Kif2cQ922S8 721 aa12.93□□□□□ -0.34
Chd3-202ENSMUST00000108661 Nap1l4Q78ZA7 375 aaKnown RBP12.93□□□□□ -0.34
Chd3-202ENSMUST00000108661 Ppm1eQ80TL0 749 aa12.93□□□□□ -0.34
Chd3-202ENSMUST00000108661 Fndc3aQ8BX90 1198 aa12.93□□□□□ -0.34
Chd3-202ENSMUST00000108661 MycbpapQ5SUV2 932 aa12.93□□□□□ -0.34
Chd3-202ENSMUST00000108661 Speer3W4VSP1 261 aa12.93□□□□□ -0.34
Chd3-202ENSMUST00000108661 Col20a1Q923P0 1320 aa12.93□□□□□ -0.34
Chd3-202ENSMUST00000108661 Adgrb2Q8CGM1 1561 aa12.93□□□□□ -0.34
Chd3-202ENSMUST00000108661 Akr1c19G3X9Y6 323 aa12.93□□□□□ -0.34
Chd3-202ENSMUST00000108661 Dapk3O54784 448 aa12.93□□□□□ -0.34
Chd3-202ENSMUST00000108661 Rps8P62242 208 aaKnown RBP12.93□□□□□ -0.34
Chd3-202ENSMUST00000108661 Zbtb22Q9Z0G7 638 aa12.93□□□□□ -0.34
Chd3-202ENSMUST00000108661 TnksQ6PFX9 1320 aa12.93□□□□□ -0.34
Chd3-202ENSMUST00000108661 Nfil3O08750 462 aa12.93□□□□□ -0.34
Chd3-202ENSMUST00000108661 Dnm2P39054 870 aaKnown RBP12.93□□□□□ -0.34
Chd3-202ENSMUST00000108661 Map9Q3TRR0 646 aa12.93□□□□□ -0.34
Chd3-202ENSMUST00000108661 Tmx1Q8VBT0 278 aa12.93□□□□□ -0.34
Chd3-202ENSMUST00000108661 Tspyl3Q3UYP3 334 aa12.92□□□□□ -0.34
Chd3-202ENSMUST00000108661 Paxip1Q6NZQ4 1056 aa12.92□□□□□ -0.34
Chd3-202ENSMUST00000108661 Rab3il1Q8VDV3 383 aa12.92□□□□□ -0.34
Chd3-202ENSMUST00000108661 Med10Q9CXU0 135 aa12.92□□□□□ -0.34
Chd3-202ENSMUST00000108661 Lrrc9Q8CDN9 1456 aa12.92□□□□□ -0.34
Chd3-202ENSMUST00000108661 Kif1bQ60575 1816 aaKnown RBP12.92□□□□□ -0.34
Chd3-202ENSMUST00000108661 Fyb2A2A995 729 aa12.92□□□□□ -0.34
Chd3-202ENSMUST00000108661 Cyp2c69E9PXC3 491 aa12.92□□□□□ -0.34
Chd3-202ENSMUST00000108661 Rnaseh1O70338 285 aa12.92□□□□□ -0.34
Chd3-202ENSMUST00000108661 Il15P48346 162 aa12.92□□□□□ -0.34
Chd3-202ENSMUST00000108661 Cyp2c40P56657 491 aa12.92□□□□□ -0.34
Chd3-202ENSMUST00000108661 Tshz3Q8CGV9 1081 aa12.92□□□□□ -0.34
Chd3-202ENSMUST00000108661 Edc4Q3UJB9 1406 aaKnown RBP12.92□□□□□ -0.34
Chd3-202ENSMUST00000108661 Prl3d3A0A0M6L0J6 224 aa12.92□□□□□ -0.34
Chd3-202ENSMUST00000108661 Parp2O88554 559 aa12.92□□□□□ -0.34
Chd3-202ENSMUST00000108661 NapaQ9DB05 295 aa12.92□□□□□ -0.34
Chd3-202ENSMUST00000108661 Sult6b1P0CC03 303 aa12.92□□□□□ -0.34
Chd3-202ENSMUST00000108661 Bbof1Q3V079 533 aa12.92□□□□□ -0.34
Chd3-202ENSMUST00000108661 Prpf40aQ9R1C7 953 aaKnown RBP12.92□□□□□ -0.34
Chd3-202ENSMUST00000108661 Slc10a4Q3UEZ8 437 aa12.92□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 44 ms