RNA–Protein interactions for RNA: ENSMUST00000082209.12

Scn8a-201, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 11,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-201ENSMUST00000082209 Caprin2Q05A80 1031 aaKnown RBP11.82□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Kif1bpQ6ZPU9 617 aa11.82□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Xrcc4Q924T3 326 aa11.82□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Tex35Q14BK3 207 aa11.82□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Il1rapl2Q9ERS6 686 aa11.82□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Fbxo3Q9DC63 480 aa11.82□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Kif17Q99PW8 1038 aa11.82□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Cdr1E9Q0B4 517 aa11.82□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Eif2aQ8BJW6 581 aaKnown RBP11.82□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Ifih1Q8R5F7 1025 aa11.82□□□□□ -0.52
Scn8a-201ENSMUST00000082209 SfswapQ3USH5 945 aaKnown RBP11.81□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Nek11Q8C0Q4 628 aa11.81□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Ncoa3O09000 1398 aa11.81□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Abca16E9PWJ7 1678 aa11.81□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Stoml1Q8CI66 399 aa11.81□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Vps18Q8R307 973 aa11.81□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Uggt1Q6P5E4 1551 aa11.81□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Adgrb2Q8CGM1 1561 aa11.81□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Col17a1Q07563 1470 aa11.81□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Letm1Q9Z2I0 738 aa11.81□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Rbm8a2A0A0N4SUH6 174 aa11.81□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Rbm8aQ9CWZ3 174 aa11.81□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Arhgef40Q3UPH7 1517 aa11.81□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Neurog2P70447 263 aa11.81□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Mcm6P97311 821 aa11.81□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Dzip1lQ499E4 774 aa11.81□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Cnot6lQ8VEG6 555 aa11.81□□□□□ -0.52
Scn8a-201ENSMUST00000082209 RragbQ6NTA4 374 aa11.81□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Chpf2Q3UU43 768 aa11.81□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Mnat1P51949 309 aa11.81□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Syt10Q9R0N4 523 aa11.81□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Cep63Q3UPP8 700 aa11.81□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Fam208aQ69ZR9 1610 aaKnown RBP11.81□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Ano1Q8BHY3 960 aa11.8□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Arhgap24Q8C4V1 747 aa11.8□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Farp2Q91VS8 1065 aa11.8□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Gm1993A6X8I0 212 aa11.8□□□□□ -0.52
Scn8a-201ENSMUST00000082209 SlxD3Z347 212 aa11.8□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Svs3aF2Z472 265 aa11.8□□□□□ -0.52
Scn8a-201ENSMUST00000082209 MarcksP26645 309 aaKnown RBP11.8□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Exoc5Q3TPX4 708 aa11.8□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Bmp2kQ91Z96 1138 aa11.8□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Kcnn1Q9EQR3 537 aa11.8□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Msantd4Q91YU3 345 aa11.8□□□□□ -0.52
Scn8a-201ENSMUST00000082209 ErmnQ5EBJ4 281 aa11.8□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Ppp2r5eQ61151 467 aa11.8□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Fam213aQ9CYH2 218 aa11.8□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Znf335A2A5K6 1337 aa11.8□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Krt18P05784 423 aa11.8□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Kifap3P70188 793 aa11.8□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Rtn1Q8K0T0 780 aa11.8□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Sept3Q9Z1S5 350 aa11.8□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Abcc1O35379 1528 aa11.8□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Prim1P20664 417 aa11.8□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Specc1lQ2KN98 1118 aaKnown RBP11.8□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Esyt1Q3U7R1 1092 aaKnown RBP11.8□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Lmod1Q8BVA4 595 aa11.8□□□□□ -0.52
Scn8a-201ENSMUST00000082209 SbdsP70122 250 aa11.8□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Tsga10Q6NY15 697 aa11.8□□□□□ -0.52
Scn8a-201ENSMUST00000082209 RarsQ9D0I9 660 aaKnown RBP11.8□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Duxf3A0A0N4SV92 674 aa11.8□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Tmtc2Q56A06 836 aa11.8□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Znf18Q810A1 556 aa11.8□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Atg3Q9CPX6 314 aa11.8□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Pde1cQ64338 706 aa11.8□□□□□ -0.52
Scn8a-201ENSMUST00000082209 GckrQ91X44 587 aa11.8□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Tbc1d7Q9D0K0 293 aa11.8□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Tmx3Q8BXZ1 456 aa11.79□□□□□ -0.52
Scn8a-201ENSMUST00000082209 PzpQ61838 1495 aa11.79□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Gm28047Q3US59 414 aa11.79□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Myom2Q14BI5 1463 aa11.79□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Plcd1Q8R3B1 756 aa11.79□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Fnbp4Q6ZQ03 1031 aa11.79□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Kdm1aQ6ZQ88 853 aa11.79□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Tbc1d4Q8BYJ6 1307 aa11.79□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Kdm6aO70546 1401 aa11.79□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Krt8P11679 490 aaKnown RBP11.79□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Taok1Q5F2E8 1001 aa11.79□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Slc14a2Q8R4T9 930 aa11.79□□□□□ -0.52
Scn8a-201ENSMUST00000082209 AmfrQ9R049 643 aa11.79□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Zfp213E9QAW0 468 aa11.78□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Ifit2Q64112 472 aa11.78□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Grpel1Q99LP6 217 aa11.78□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Plcb1Q9Z1B3 1216 aa11.78□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Rrp1P56183 494 aaKnown RBP11.78□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Atp2b3Q0VF55 1220 aa11.78□□□□□ -0.52
Scn8a-201ENSMUST00000082209 SkiQ60698 725 aa11.78□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Ctnna3Q65CL1 895 aa11.78□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Ier5O89113 308 aa11.78□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Lzts2Q91YU6 671 aa11.78□□□□□ -0.52
Scn8a-201ENSMUST00000082209 MthfsQ9D110 203 aa11.78□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Mast3Q3U214 1321 aa11.78□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Igbp1Q61249 340 aa11.78□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Zfp397Q7TNK4 527 aa11.78□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Pdia3P27773 505 aaKnown RBP11.78□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Filip1Q9CS72 1211 aa11.78□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Sept7O55131 436 aa11.78□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Utp18Q5SSI6 552 aaKnown RBP11.78□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Zbtb22Q9Z0G7 638 aa11.78□□□□□ -0.52
Scn8a-201ENSMUST00000082209 Hfm1D3Z4R1 1434 aa11.78□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 88.6 ms