RNA–Protein interactions for RNA: ENSMUST00000061628.6

Pcdh20-201, Transcript of Protocadherin-20, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh20, Length 5,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20-201ENSMUST00000061628 Spa17Q62252 149 aa16.69■□□□□ 0.26
Pcdh20-201ENSMUST00000061628 Rassf2Q8BMS9 326 aa16.69■□□□□ 0.26
Pcdh20-201ENSMUST00000061628 Serpina10Q8R121 448 aa16.69■□□□□ 0.26
Pcdh20-201ENSMUST00000061628 Acot9Q9R0X4 439 aaKnown RBP16.69■□□□□ 0.26
Pcdh20-201ENSMUST00000061628 Terf1P70371 421 aa16.69■□□□□ 0.26
Pcdh20-201ENSMUST00000061628 Igbp1Q61249 340 aa16.69■□□□□ 0.26
Pcdh20-201ENSMUST00000061628 Morc2aQ69ZX6 1030 aa16.69■□□□□ 0.26
Pcdh20-201ENSMUST00000061628 Mmp8O70138 465 aa16.68■□□□□ 0.26
Pcdh20-201ENSMUST00000061628 Tekt3Q6X6Z7 490 aa16.68■□□□□ 0.26
Pcdh20-201ENSMUST00000061628 Cfap100Q80VN0 613 aa16.68■□□□□ 0.26
Pcdh20-201ENSMUST00000061628 Tcp11l1Q8BTG3 509 aa16.68■□□□□ 0.26
Pcdh20-201ENSMUST00000061628 Emilin2Q8K482 1074 aa16.68■□□□□ 0.26
Pcdh20-201ENSMUST00000061628 Cabp5Q9JLK3 173 aa16.68■□□□□ 0.26
Pcdh20-201ENSMUST00000061628 Clip2Q9Z0H8 1047 aa16.68■□□□□ 0.26
Pcdh20-201ENSMUST00000061628 Apol7aB2RT54 418 aa16.68■□□□□ 0.26
Pcdh20-201ENSMUST00000061628 Svs3aF2Z472 265 aa16.68■□□□□ 0.26
Pcdh20-201ENSMUST00000061628 Mdm2P23804 489 aa16.68■□□□□ 0.26
Pcdh20-201ENSMUST00000061628 Glg1Q61543 1175 aaKnown RBP16.68■□□□□ 0.26
Pcdh20-201ENSMUST00000061628 Pa2g4P50580 394 aaKnown RBP16.68■□□□□ 0.26
Pcdh20-201ENSMUST00000061628 Snrpa1P57784 255 aaKnown RBP16.68■□□□□ 0.26
Pcdh20-201ENSMUST00000061628 Lmod1Q8BVA4 595 aa16.68■□□□□ 0.26
Pcdh20-201ENSMUST00000061628 Kif17Q99PW8 1038 aa16.68■□□□□ 0.26
Pcdh20-201ENSMUST00000061628 Mug2P28666 1451 aa16.68■□□□□ 0.26
Pcdh20-201ENSMUST00000061628 Zfp213E9QAW0 468 aa16.68■□□□□ 0.26
Pcdh20-201ENSMUST00000061628 Tom1O88746 492 aa16.68■□□□□ 0.26
Pcdh20-201ENSMUST00000061628 Rpl13P47963 211 aaKnown RBP16.68■□□□□ 0.26
Pcdh20-201ENSMUST00000061628 Ccdc82Q6PG04 518 aa16.68■□□□□ 0.26
Pcdh20-201ENSMUST00000061628 Gigyf2Q6Y7W8 1291 aaKnown RBP16.68■□□□□ 0.26
Pcdh20-201ENSMUST00000061628 ThemisQ8BGW0 636 aa16.68■□□□□ 0.26
Pcdh20-201ENSMUST00000061628 Fam177a1Q8BR63 207 aa16.68■□□□□ 0.26
Pcdh20-201ENSMUST00000061628 Ginm1Q91WR6 327 aa16.68■□□□□ 0.26
Pcdh20-201ENSMUST00000061628 Pcdhb22Q91XZ8 794 aa16.68■□□□□ 0.26
Pcdh20-201ENSMUST00000061628 Dnajc10Q9DC23 793 aa16.68■□□□□ 0.26
Pcdh20-201ENSMUST00000061628 Mast3Q3U214 1321 aa16.67■□□□□ 0.26
Pcdh20-201ENSMUST00000061628 Ppfia3P60469 1194 aa16.67■□□□□ 0.26
Pcdh20-201ENSMUST00000061628 Utp18Q5SSI6 552 aaKnown RBP16.67■□□□□ 0.26
Pcdh20-201ENSMUST00000061628 Tmx3Q8BXZ1 456 aa16.67■□□□□ 0.26
Pcdh20-201ENSMUST00000061628 Terf2ipQ91VL8 393 aa16.67■□□□□ 0.26
Pcdh20-201ENSMUST00000061628 Ssh2Q5SW75 1423 aa16.67■□□□□ 0.26
Pcdh20-201ENSMUST00000061628 Ubxn1Q922Y1 297 aa16.67■□□□□ 0.26
Pcdh20-201ENSMUST00000061628 Abcc6Q9R1S7 1498 aa16.67■□□□□ 0.26
Pcdh20-201ENSMUST00000061628 Bicd1Q8BR07 835 aa16.67■□□□□ 0.26
Pcdh20-201ENSMUST00000061628 Kdm4cQ8VCD7 1054 aa16.67■□□□□ 0.26
Pcdh20-201ENSMUST00000061628 Dph6Q9CQ28 267 aa16.67■□□□□ 0.26
Pcdh20-201ENSMUST00000061628 Calml3Q9D6P8 149 aa16.67■□□□□ 0.26
Pcdh20-201ENSMUST00000061628 Kdm1aQ6ZQ88 853 aa16.67■□□□□ 0.26
Pcdh20-201ENSMUST00000061628 Ddx23D3Z0M9 819 aaKnown RBP16.66■□□□□ 0.26
Pcdh20-201ENSMUST00000061628 Clec11aO88200 328 aa16.66■□□□□ 0.26
Pcdh20-201ENSMUST00000061628 Nsrp1Q5NCR9 542 aa16.66■□□□□ 0.26
Pcdh20-201ENSMUST00000061628 Kif5bQ61768 963 aa16.66■□□□□ 0.26
Pcdh20-201ENSMUST00000061628 Vps37cQ8R105 352 aa16.66■□□□□ 0.26
Pcdh20-201ENSMUST00000061628 Atg3Q9CPX6 314 aa16.66■□□□□ 0.26
Pcdh20-201ENSMUST00000061628 Ndufa8Q9DCJ5 172 aa16.66■□□□□ 0.26
Pcdh20-201ENSMUST00000061628 Caprin2Q05A80 1031 aaKnown RBP16.66■□□□□ 0.26
Pcdh20-201ENSMUST00000061628 Fam107bQ3TGF2 131 aa16.66■□□□□ 0.26
Pcdh20-201ENSMUST00000061628 Hexim1Q8R409 356 aaKnown RBP16.66■□□□□ 0.26
Pcdh20-201ENSMUST00000061628 Dennd4bQ3U1Y4 1499 aa16.66■□□□□ 0.26
Pcdh20-201ENSMUST00000061628 Gm45015A0A140LII9 184 aa16.66■□□□□ 0.26
Pcdh20-201ENSMUST00000061628 Nlrp2Q4PLS0 1046 aaKnown RBP16.66■□□□□ 0.26
Pcdh20-201ENSMUST00000061628 Sdccag8Q80UF4 717 aa16.66■□□□□ 0.26
Pcdh20-201ENSMUST00000061628 Rps6kb1Q8BSK8 525 aa16.66■□□□□ 0.26
Pcdh20-201ENSMUST00000061628 A0A1W2P7S8 802 aa16.65■□□□□ 0.26
Pcdh20-201ENSMUST00000061628 Tldc2A2ACG1 198 aa16.65■□□□□ 0.26
Pcdh20-201ENSMUST00000061628 Zkscan16A2ALW2 728 aa16.65■□□□□ 0.26
Pcdh20-201ENSMUST00000061628 AU019823E9PUQ3 292 aa16.65■□□□□ 0.26
Pcdh20-201ENSMUST00000061628 Snx25Q3ZT31 840 aa16.65■□□□□ 0.26
Pcdh20-201ENSMUST00000061628 Cdc5lQ6A068 802 aaKnown RBP16.65■□□□□ 0.26
Pcdh20-201ENSMUST00000061628 Ddx27Q921N6 760 aaKnown RBP16.65■□□□□ 0.26
Pcdh20-201ENSMUST00000061628 Aox1O54754 1333 aa16.65■□□□□ 0.26
Pcdh20-201ENSMUST00000061628 Prl3d3A0A0M6L0J6 224 aa16.65■□□□□ 0.26
Pcdh20-201ENSMUST00000061628 1700006A11RikB9EHI3 544 aa16.65■□□□□ 0.26
Pcdh20-201ENSMUST00000061628 Tcerg1lQ3B807 590 aa16.65■□□□□ 0.26
Pcdh20-201ENSMUST00000061628 Gm28047Q3US59 414 aa16.65■□□□□ 0.26
Pcdh20-201ENSMUST00000061628 Ppp2r5bQ6PD28 497 aa16.65■□□□□ 0.26
Pcdh20-201ENSMUST00000061628 Six6os1Q9CTN5 574 aa16.65■□□□□ 0.26
Pcdh20-201ENSMUST00000061628 Ccdc105Q9D4K7 499 aa16.65■□□□□ 0.26
Pcdh20-201ENSMUST00000061628 Ctdp1Q7TSG2 960 aa16.65■□□□□ 0.26
Pcdh20-201ENSMUST00000061628 Ufl1Q8CCJ3 793 aaKnown RBP16.65■□□□□ 0.26
Pcdh20-201ENSMUST00000061628 Gm28510A0A087WP28 240 aa16.64■□□□□ 0.25
Pcdh20-201ENSMUST00000061628 Slc27a3O88561 667 aa16.64■□□□□ 0.25
Pcdh20-201ENSMUST00000061628 Eya1P97767 591 aa16.64■□□□□ 0.25
Pcdh20-201ENSMUST00000061628 Spocd1B1ASB6 936 aa16.64■□□□□ 0.25
Pcdh20-201ENSMUST00000061628 Diaph1O08808 1255 aa16.64■□□□□ 0.25
Pcdh20-201ENSMUST00000061628 SlmapQ3URD3 845 aa16.64■□□□□ 0.25
Pcdh20-201ENSMUST00000061628 Sdad1Q80UZ2 687 aaKnown RBP16.64■□□□□ 0.25
Pcdh20-201ENSMUST00000061628 Ccdc113Q8C5T8 377 aa16.64■□□□□ 0.25
Pcdh20-201ENSMUST00000061628 Prl3d2F6R3P9 224 aa16.63■□□□□ 0.25
Pcdh20-201ENSMUST00000061628 Smarcad1Q04692 1021 aa16.63■□□□□ 0.25
Pcdh20-201ENSMUST00000061628 Abtb2Q7TQI7 1024 aa16.63■□□□□ 0.25
Pcdh20-201ENSMUST00000061628 Depdc1bQ8BH88 529 aa16.63■□□□□ 0.25
Pcdh20-201ENSMUST00000061628 Sh3tc1G3X9F6 1346 aa16.63■□□□□ 0.25
Pcdh20-201ENSMUST00000061628 Grpel1Q99LP6 217 aa16.63■□□□□ 0.25
Pcdh20-201ENSMUST00000061628 Ccdc89Q9DA73 370 aa16.63■□□□□ 0.25
Pcdh20-201ENSMUST00000061628 Cbfa2t2O70374 594 aa16.63■□□□□ 0.25
Pcdh20-201ENSMUST00000061628 Zfp397Q7TNK4 527 aa16.63■□□□□ 0.25
Pcdh20-201ENSMUST00000061628 Tacc3Q9JJ11 631 aa16.63■□□□□ 0.25
Pcdh20-201ENSMUST00000061628 Eya2O08575 532 aa16.63■□□□□ 0.25
Pcdh20-201ENSMUST00000061628 Sept7O55131 436 aa16.63■□□□□ 0.25
Pcdh20-201ENSMUST00000061628 Ccdc129Q14B48 1034 aa16.63■□□□□ 0.25
Pcdh20-201ENSMUST00000061628 Tmtc2Q56A06 836 aa16.63■□□□□ 0.25
Retrieved 100 of 22,080 RNA–protein pairs in 68.3 ms