RNA–Protein interactions for RNA: ENSMUST00000020827.6

Rnft1-201, Transcript of E3 ubiquitin-protein ligase RNFT1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnft1, Length 4,452 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnft1-201ENSMUST00000020827 Pdcl3Q8BVF2 240 aa11.8□□□□□ -0.52
Rnft1-201ENSMUST00000020827 Eaf2Q91ZD6 262 aa11.8□□□□□ -0.52
Rnft1-201ENSMUST00000020827 ZwintQ9CQU5 252 aa11.8□□□□□ -0.52
Rnft1-201ENSMUST00000020827 Fam213aQ9CYH2 218 aa11.8□□□□□ -0.52
Rnft1-201ENSMUST00000020827 Usp42B2RQC2 1324 aaKnown RBP11.79□□□□□ -0.52
Rnft1-201ENSMUST00000020827 Bicdl1A0JNT9 577 aa11.79□□□□□ -0.52
Rnft1-201ENSMUST00000020827 Sept9Q80UG5 583 aa11.79□□□□□ -0.52
Rnft1-201ENSMUST00000020827 Col3a1P08121 1464 aa11.79□□□□□ -0.52
Rnft1-201ENSMUST00000020827 Nhsl1Q8CAF4 1587 aa11.79□□□□□ -0.52
Rnft1-201ENSMUST00000020827 Ddx19aQ61655 478 aaKnown RBP11.79□□□□□ -0.52
Rnft1-201ENSMUST00000020827 Ddx58Q6Q899 926 aa11.79□□□□□ -0.52
Rnft1-201ENSMUST00000020827 Lrrc15Q80X72 579 aa11.79□□□□□ -0.52
Rnft1-201ENSMUST00000020827 Snw1Q9CSN1 536 aaKnown RBP11.79□□□□□ -0.52
Rnft1-201ENSMUST00000020827 Large1Q9Z1M7 756 aa11.79□□□□□ -0.52
Rnft1-201ENSMUST00000020827 Dnajc25A2ALW5 357 aa11.79□□□□□ -0.52
Rnft1-201ENSMUST00000020827 1700113H08RikE9Q9Q5 327 aa11.79□□□□□ -0.52
Rnft1-201ENSMUST00000020827 Gm29094F6Q785 221 aa11.79□□□□□ -0.52
Rnft1-201ENSMUST00000020827 Cops6O88545 324 aa11.79□□□□□ -0.52
Rnft1-201ENSMUST00000020827 MthfsQ9D110 203 aa11.79□□□□□ -0.52
Rnft1-201ENSMUST00000020827 Lonrf3Q9D4H7 753 aa11.79□□□□□ -0.52
Rnft1-201ENSMUST00000020827 Bcl9lQ67FY2 1494 aa11.78□□□□□ -0.52
Rnft1-201ENSMUST00000020827 Dnajc2P54103 621 aaKnown RBP11.78□□□□□ -0.52
Rnft1-201ENSMUST00000020827 Ccdc82Q6PG04 518 aa11.78□□□□□ -0.52
Rnft1-201ENSMUST00000020827 Prkag3Q8BGM7 489 aa11.78□□□□□ -0.52
Rnft1-201ENSMUST00000020827 Tsen34Q8BMZ5 316 aa11.78□□□□□ -0.52
Rnft1-201ENSMUST00000020827 Greb1lB9EJV3 1913 aa11.78□□□□□ -0.52
Rnft1-201ENSMUST00000020827 Nav1Q8CH77 1875 aa11.78□□□□□ -0.52
Rnft1-201ENSMUST00000020827 Gm36210A0A1B0GS00 229 aa11.78□□□□□ -0.52
Rnft1-201ENSMUST00000020827 Cyp3a57D3YYZ0 503 aa11.78□□□□□ -0.52
Rnft1-201ENSMUST00000020827 Casp1P29452 402 aa11.78□□□□□ -0.52
Rnft1-201ENSMUST00000020827 Prl2c1Q5SVL9 228 aa11.78□□□□□ -0.52
Rnft1-201ENSMUST00000020827 Cyp7a1Q64505 503 aa11.78□□□□□ -0.52
Rnft1-201ENSMUST00000020827 Bloc1s2Q9CWG9 143 aa11.78□□□□□ -0.52
Rnft1-201ENSMUST00000020827 Stat1P42225 749 aa11.78□□□□□ -0.52
Rnft1-201ENSMUST00000020827 Q8BT18 775 aa11.78□□□□□ -0.52
Rnft1-201ENSMUST00000020827 Mmel1Q9JLI3 765 aa11.78□□□□□ -0.52
Rnft1-201ENSMUST00000020827 Pms1Q8K119 917 aa11.78□□□□□ -0.52
Rnft1-201ENSMUST00000020827 Eif3aP23116 1344 aaKnown RBP11.78□□□□□ -0.52
Rnft1-201ENSMUST00000020827 Prr5lA2AVJ5 370 aa11.77□□□□□ -0.52
Rnft1-201ENSMUST00000020827 Ythdc1E9Q5K9 736 aaKnown RBP11.77□□□□□ -0.52
Rnft1-201ENSMUST00000020827 Bin1O08539 588 aaKnown RBP11.77□□□□□ -0.52
Rnft1-201ENSMUST00000020827 Ube2hP62257 183 aa11.77□□□□□ -0.52
Rnft1-201ENSMUST00000020827 Ap5z1Q3U829 807 aa11.77□□□□□ -0.52
Rnft1-201ENSMUST00000020827 Tmem87bQ8BKU8 555 aa11.77□□□□□ -0.52
Rnft1-201ENSMUST00000020827 Mrc1Q61830 1456 aa11.77□□□□□ -0.52
Rnft1-201ENSMUST00000020827 Mindy4Q3UQI9 744 aa11.77□□□□□ -0.53
Rnft1-201ENSMUST00000020827 Fsd1Q7TPM6 496 aa11.77□□□□□ -0.53
Rnft1-201ENSMUST00000020827 Abca3Q8R420 1704 aa11.77□□□□□ -0.53
Rnft1-201ENSMUST00000020827 Bcl11bQ99PV8 884 aa11.77□□□□□ -0.53
Rnft1-201ENSMUST00000020827 Cdh23Q99PF4 3354 aa11.77□□□□□ -0.53
Rnft1-201ENSMUST00000020827 Atp2b1G5E829 1220 aa11.77□□□□□ -0.53
Rnft1-201ENSMUST00000020827 Gpatch11Q3UFS4 262 aa11.77□□□□□ -0.53
Rnft1-201ENSMUST00000020827 Spata5Q3UMC0 893 aaKnown RBP11.77□□□□□ -0.53
Rnft1-201ENSMUST00000020827 Ranbp6Q8BIV3 1105 aa11.77□□□□□ -0.53
Rnft1-201ENSMUST00000020827 Epha2Q03145 977 aa11.76□□□□□ -0.53
Rnft1-201ENSMUST00000020827 Slx1bQ8BX32 270 aa11.76□□□□□ -0.53
Rnft1-201ENSMUST00000020827 Plcd1Q8R3B1 756 aa11.76□□□□□ -0.53
Rnft1-201ENSMUST00000020827 Stard3nlQ9DCI3 235 aa11.76□□□□□ -0.53
Rnft1-201ENSMUST00000020827 Suclg2Q9Z2I8 433 aa11.76□□□□□ -0.53
Rnft1-201ENSMUST00000020827 TrioQ0KL02 3102 aa11.76□□□□□ -0.53
Rnft1-201ENSMUST00000020827 XpcP51612 930 aa11.76□□□□□ -0.53
Rnft1-201ENSMUST00000020827 Nlrp1aQ2LKU9 1182 aa11.76□□□□□ -0.53
Rnft1-201ENSMUST00000020827 Srp68Q8BMA6 625 aaKnown RBP11.76□□□□□ -0.53
Rnft1-201ENSMUST00000020827 DymQ8CHY3 669 aa11.76□□□□□ -0.53
Rnft1-201ENSMUST00000020827 SdsQ8VBT2 327 aa11.76□□□□□ -0.53
Rnft1-201ENSMUST00000020827 Vnn1Q9Z0K8 512 aa11.76□□□□□ -0.53
Rnft1-201ENSMUST00000020827 GakQ99KY4 1305 aa11.76□□□□□ -0.53
Rnft1-201ENSMUST00000020827 Usp49Q6P9L4 685 aa11.76□□□□□ -0.53
Rnft1-201ENSMUST00000020827 Mctp1E9PV86 951 aa11.76□□□□□ -0.53
Rnft1-201ENSMUST00000020827 Nmt2O70311 529 aa11.76□□□□□ -0.53
Rnft1-201ENSMUST00000020827 Fam83bQ0VBM2 1012 aa11.76□□□□□ -0.53
Rnft1-201ENSMUST00000020827 Acnat2Q8BGG9 420 aa11.76□□□□□ -0.53
Rnft1-201ENSMUST00000020827 Nup88Q8CEC0 753 aaKnown RBP11.76□□□□□ -0.53
Rnft1-201ENSMUST00000020827 Nlrp3Q8R4B8 1033 aa11.76□□□□□ -0.53
Rnft1-201ENSMUST00000020827 Krt25Q8VCW2 446 aa11.76□□□□□ -0.53
Rnft1-201ENSMUST00000020827 Sirt2Q8VDQ8 389 aa11.76□□□□□ -0.53
Rnft1-201ENSMUST00000020827 Pold4Q9CWP8 107 aa11.76□□□□□ -0.53
Rnft1-201ENSMUST00000020827 Plekhf1Q3TB82 279 aa11.75□□□□□ -0.53
Rnft1-201ENSMUST00000020827 Apobec3Q99J72 440 aaKnown RBP11.75□□□□□ -0.53
Rnft1-201ENSMUST00000020827 Foxo4Q9WVH3 505 aa11.75□□□□□ -0.53
Rnft1-201ENSMUST00000020827 Nlrp9aQ66X03 949 aa11.75□□□□□ -0.53
Rnft1-201ENSMUST00000020827 Tcof1O08784 1320 aaKnown RBP11.75□□□□□ -0.53
Rnft1-201ENSMUST00000020827 Celf1P28659 486 aaKnown RBP11.75□□□□□ -0.53
Rnft1-201ENSMUST00000020827 Usp25P57080 1055 aa11.75□□□□□ -0.53
Rnft1-201ENSMUST00000020827 KhsrpQ3U0V1 748 aaKnown RBP11.75□□□□□ -0.53
Rnft1-201ENSMUST00000020827 Nxf2Q4ZGD8 691 aa11.75□□□□□ -0.53
Rnft1-201ENSMUST00000020827 Inpp5bQ8K337 993 aa11.75□□□□□ -0.53
Rnft1-201ENSMUST00000020827 Tbc1d4Q8BYJ6 1307 aa11.75□□□□□ -0.53
Rnft1-201ENSMUST00000020827 PnnO35691 725 aaKnown RBP11.74□□□□□ -0.53
Rnft1-201ENSMUST00000020827 Tyro3P55144 880 aa11.74□□□□□ -0.53
Rnft1-201ENSMUST00000020827 Smarcc2Q6PDG5 1213 aa11.74□□□□□ -0.53
Rnft1-201ENSMUST00000020827 Frmd3Q8BHD4 595 aa11.74□□□□□ -0.53
Rnft1-201ENSMUST00000020827 Iffo2Q8R2V2 512 aa11.74□□□□□ -0.53
Rnft1-201ENSMUST00000020827 Prl3d2F6R3P9 224 aa11.74□□□□□ -0.53
Rnft1-201ENSMUST00000020827 TsksO54887 585 aa11.74□□□□□ -0.53
Rnft1-201ENSMUST00000020827 Cdc27A2A6Q5 825 aa11.74□□□□□ -0.53
Rnft1-201ENSMUST00000020827 Usp50Q6P8X6 390 aa11.74□□□□□ -0.53
Rnft1-201ENSMUST00000020827 Magi2Q9WVQ1 1275 aa11.74□□□□□ -0.53
Rnft1-201ENSMUST00000020827 Pcdhb9E9Q5G2 828 aa11.74□□□□□ -0.53
Rnft1-201ENSMUST00000020827 Itga6Q61739 1091 aa11.74□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 29.7 ms