RNA–Protein interactions for RNA: ENSMUST00000017153.3

Sdc4-201, Transcript of Syndecan-4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc4, Length 2,458 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4-201ENSMUST00000017153 Rnf20Q5DTM8 973 aa14.38□□□□□ -0.11
Sdc4-201ENSMUST00000017153 Ccdc66Q6NS45 935 aa14.38□□□□□ -0.11
Sdc4-201ENSMUST00000017153 Prkab2Q6PAM0 271 aa14.38□□□□□ -0.11
Sdc4-201ENSMUST00000017153 Tsr2Q8C8T8 191 aa14.38□□□□□ -0.11
Sdc4-201ENSMUST00000017153 Rassf4Q8CB96 322 aa14.38□□□□□ -0.11
Sdc4-201ENSMUST00000017153 Nup88Q8CEC0 753 aaKnown RBP14.38□□□□□ -0.11
Sdc4-201ENSMUST00000017153 Klra10Q9R1G6 266 aa14.38□□□□□ -0.11
Sdc4-201ENSMUST00000017153 Tjp1P39447 1745 aaKnown RBP14.38□□□□□ -0.11
Sdc4-201ENSMUST00000017153 Hspa2P17156 633 aa14.37□□□□□ -0.11
Sdc4-201ENSMUST00000017153 Jarid2Q62315 1234 aa14.37□□□□□ -0.11
Sdc4-201ENSMUST00000017153 Trim37Q6PCX9 961 aa14.37□□□□□ -0.11
Sdc4-201ENSMUST00000017153 Larp1Q6ZQ58 1072 aaKnown RBP14.37□□□□□ -0.11
Sdc4-201ENSMUST00000017153 Saal1Q9D2C2 474 aa14.37□□□□□ -0.11
Sdc4-201ENSMUST00000017153 Zbtb22Q9Z0G7 638 aa14.37□□□□□ -0.11
Sdc4-201ENSMUST00000017153 Plekhd1B2RPU2 505 aa14.37□□□□□ -0.11
Sdc4-201ENSMUST00000017153 Ptgs1P22437 602 aa14.37□□□□□ -0.11
Sdc4-201ENSMUST00000017153 Mcm3P25206 812 aaKnown RBP14.37□□□□□ -0.11
Sdc4-201ENSMUST00000017153 Bach2P97303 839 aa14.37□□□□□ -0.11
Sdc4-201ENSMUST00000017153 Cep63Q3UPP8 700 aa14.37□□□□□ -0.11
Sdc4-201ENSMUST00000017153 GpkowQ56A08 488 aa14.37□□□□□ -0.11
Sdc4-201ENSMUST00000017153 Adora1Q60612 326 aa14.37□□□□□ -0.11
Sdc4-201ENSMUST00000017153 Wdr60Q8C761 999 aa14.37□□□□□ -0.11
Sdc4-201ENSMUST00000017153 Gtpbp10Q8K013 366 aa14.37□□□□□ -0.11
Sdc4-201ENSMUST00000017153 Tns2Q8CGB6 1400 aa14.37□□□□□ -0.11
Sdc4-201ENSMUST00000017153 Aox1O54754 1333 aa14.37□□□□□ -0.11
Sdc4-201ENSMUST00000017153 InsrrQ9WTL4 1300 aa14.37□□□□□ -0.11
Sdc4-201ENSMUST00000017153 Mst1rQ62190 1378 aa14.36□□□□□ -0.11
Sdc4-201ENSMUST00000017153 Adcy5P84309 1262 aa14.36□□□□□ -0.11
Sdc4-201ENSMUST00000017153 Leo1Q5XJE5 667 aa14.36□□□□□ -0.11
Sdc4-201ENSMUST00000017153 Fbxo41Q6NS60 873 aa14.36□□□□□ -0.11
Sdc4-201ENSMUST00000017153 Rps6kb1Q8BSK8 525 aa14.36□□□□□ -0.11
Sdc4-201ENSMUST00000017153 Zfp113Q8C689 439 aa14.36□□□□□ -0.11
Sdc4-201ENSMUST00000017153 AceP09470 1312 aa14.36□□□□□ -0.11
Sdc4-201ENSMUST00000017153 Zranb3Q6NZP1 1069 aa14.36□□□□□ -0.11
Sdc4-201ENSMUST00000017153 Nap1l3Q794H2 544 aa14.36□□□□□ -0.11
Sdc4-201ENSMUST00000017153 Frmd4bQ920B0 1035 aa14.36□□□□□ -0.11
Sdc4-201ENSMUST00000017153 Bloc1s2Q9CWG9 143 aa14.36□□□□□ -0.11
Sdc4-201ENSMUST00000017153 Slit1Q80TR4 1531 aa14.36□□□□□ -0.11
Sdc4-201ENSMUST00000017153 Cfap73J3QPZ5 306 aa14.35□□□□□ -0.11
Sdc4-201ENSMUST00000017153 FanccP50652 591 aa14.35□□□□□ -0.11
Sdc4-201ENSMUST00000017153 Smc4Q8CG47 1286 aa14.35□□□□□ -0.11
Sdc4-201ENSMUST00000017153 Rbm5Q91YE7 815 aaKnown RBP14.35□□□□□ -0.11
Sdc4-201ENSMUST00000017153 PdcQ9QW08 244 aa14.35□□□□□ -0.11
Sdc4-201ENSMUST00000017153 Zfp213E9QAW0 468 aa14.35□□□□□ -0.11
Sdc4-201ENSMUST00000017153 Neurod6P48986 337 aa14.35□□□□□ -0.11
Sdc4-201ENSMUST00000017153 Mcm6P97311 821 aa14.35□□□□□ -0.11
Sdc4-201ENSMUST00000017153 DbnlQ62418 436 aa14.35□□□□□ -0.11
Sdc4-201ENSMUST00000017153 Tmem87bQ8BKU8 555 aa14.35□□□□□ -0.11
Sdc4-201ENSMUST00000017153 Slc39a6Q8C145 765 aa14.35□□□□□ -0.11
Sdc4-201ENSMUST00000017153 StrbpQ91WM1 672 aaKnown RBP14.35□□□□□ -0.11
Sdc4-201ENSMUST00000017153 Mageb16Q9CWV4 363 aa14.35□□□□□ -0.11
Sdc4-201ENSMUST00000017153 Utp3Q9JI13 469 aaKnown RBP14.35□□□□□ -0.11
Sdc4-201ENSMUST00000017153 PigbQ9JJQ0 542 aa14.35□□□□□ -0.11
Sdc4-201ENSMUST00000017153 MypnQ5DTJ9 1315 aa14.35□□□□□ -0.11
Sdc4-201ENSMUST00000017153 Spata31d1bE9QA57 1361 aa14.34□□□□□ -0.11
Sdc4-201ENSMUST00000017153 RubcnlQ3TD16 648 aa14.34□□□□□ -0.11
Sdc4-201ENSMUST00000017153 Esyt1Q3U7R1 1092 aaKnown RBP14.34□□□□□ -0.11
Sdc4-201ENSMUST00000017153 Ankib1Q6ZPS6 1085 aa14.34□□□□□ -0.11
Sdc4-201ENSMUST00000017153 Ripor2Q80U16 1078 aa14.34□□□□□ -0.11
Sdc4-201ENSMUST00000017153 PhaxQ9JJT9 385 aaKnown RBP14.34□□□□□ -0.11
Sdc4-201ENSMUST00000017153 Hmg20bQ9Z104 317 aa14.34□□□□□ -0.11
Sdc4-201ENSMUST00000017153 Tnks1bp1P58871 1720 aa14.34□□□□□ -0.11
Sdc4-201ENSMUST00000017153 Hvcn1Q3U2S8 269 aa14.34□□□□□ -0.11
Sdc4-201ENSMUST00000017153 Ddx17Q501J6 650 aaKnown RBP14.34□□□□□ -0.11
Sdc4-201ENSMUST00000017153 Klra8Q60682 266 aa14.34□□□□□ -0.11
Sdc4-201ENSMUST00000017153 Asic4Q7TNS7 539 aa14.34□□□□□ -0.11
Sdc4-201ENSMUST00000017153 Fam50bQ9WTJ8 334 aa14.34□□□□□ -0.11
Sdc4-201ENSMUST00000017153 Rbbp8nlA2ABX0 614 aa14.33□□□□□ -0.12
Sdc4-201ENSMUST00000017153 Rrm1P07742 792 aa14.33□□□□□ -0.12
Sdc4-201ENSMUST00000017153 Cdkn1cP49919 348 aa14.33□□□□□ -0.12
Sdc4-201ENSMUST00000017153 Cnnm3Q32NY4 713 aa14.33□□□□□ -0.12
Sdc4-201ENSMUST00000017153 Ccdc40Q8BI79 1192 aa14.33□□□□□ -0.12
Sdc4-201ENSMUST00000017153 Cep57l1Q8VDS7 400 aa14.33□□□□□ -0.12
Sdc4-201ENSMUST00000017153 Tmco4Q91WU4 631 aa14.33□□□□□ -0.12
Sdc4-201ENSMUST00000017153 Tbc1d7Q9D0K0 293 aa14.33□□□□□ -0.12
Sdc4-201ENSMUST00000017153 Gm21663A0A0G2JE01 267 aa14.33□□□□□ -0.12
Sdc4-201ENSMUST00000017153 5031410I06RikE9Q4E0 267 aa14.33□□□□□ -0.12
Sdc4-201ENSMUST00000017153 Gm5862K7N5V5 267 aa14.33□□□□□ -0.12
Sdc4-201ENSMUST00000017153 Gm10220K7N660 267 aa14.33□□□□□ -0.12
Sdc4-201ENSMUST00000017153 Dhx38Q80X98 1228 aa14.33□□□□□ -0.12
Sdc4-201ENSMUST00000017153 Atp8b3Q6UQ17 1335 aa14.33□□□□□ -0.12
Sdc4-201ENSMUST00000017153 Ubr2Q6WKZ8 1755 aa14.32□□□□□ -0.12
Sdc4-201ENSMUST00000017153 Sfr1Q8BP27 319 aa14.32□□□□□ -0.12
Sdc4-201ENSMUST00000017153 Slx1bQ8BX32 270 aa14.32□□□□□ -0.12
Sdc4-201ENSMUST00000017153 Q8C5K5 320 aa14.32□□□□□ -0.12
Sdc4-201ENSMUST00000017153 Rbm42Q91V81 474 aaKnown RBP14.32□□□□□ -0.12
Sdc4-201ENSMUST00000017153 Mx2Q9WVP9 655 aa14.32□□□□□ -0.12
Sdc4-201ENSMUST00000017153 Znf568E9PYI1 671 aa14.32□□□□□ -0.12
Sdc4-201ENSMUST00000017153 EzrP26040 586 aaKnown RBP14.32□□□□□ -0.12
Sdc4-201ENSMUST00000017153 U2af2P26369 475 aaKnown RBP14.32□□□□□ -0.12
Sdc4-201ENSMUST00000017153 CgnP59242 1191 aa14.32□□□□□ -0.12
Sdc4-201ENSMUST00000017153 Hif1aQ61221 836 aaKnown RBP14.32□□□□□ -0.12
Sdc4-201ENSMUST00000017153 Ovgp1Q62010 721 aa14.32□□□□□ -0.12
Sdc4-201ENSMUST00000017153 Me3Q8BMF3 604 aa14.32□□□□□ -0.12
Sdc4-201ENSMUST00000017153 Nek11Q8C0Q4 628 aa14.32□□□□□ -0.12
Sdc4-201ENSMUST00000017153 Smc1bQ920F6 1248 aa14.32□□□□□ -0.12
Sdc4-201ENSMUST00000017153 Wdr33Q8K4P0 1330 aaKnown RBP14.31□□□□□ -0.12
Sdc4-201ENSMUST00000017153 Ccdc162pQ0VG85 912 aa14.31□□□□□ -0.12
Sdc4-201ENSMUST00000017153 Mylk4Q5SUV5 386 aa14.31□□□□□ -0.12
Sdc4-201ENSMUST00000017153 Soga3Q6NZL0 945 aa14.31□□□□□ -0.12
Retrieved 100 of 22,080 RNA–protein pairs in 27.7 ms