RNA–Protein interactions for RNA: ENSMUST00000001147.4

Col6a1-201, Transcript of Collagen alpha-1(VI) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col6a1, Length 4,100 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1-201ENSMUST00000001147 Cwc15Q9JHS9 229 aaKnown RBP10.94□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Txnrd1Q9JMH6 613 aa10.94□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Kdm6aO70546 1401 aa10.94□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Znf541Q0GGX2 1363 aa10.94□□□□□ -0.66
Col6a1-201ENSMUST00000001147 ItpripQ3TNL8 555 aa10.94□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Usp28Q5I043 1051 aa10.94□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Tmem119Q8R138 280 aa10.94□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Rbm19Q8R3C6 952 aaKnown RBP10.94□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Adcy9P51830 1353 aa10.93□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Fez2Q6TYB5 348 aa10.93□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Fam114a1Q9D281 569 aa10.93□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Znf568E9PYI1 671 aa10.93□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Hspd1P63038 573 aaKnown RBP10.93□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Ncoa4Q5U4H9 625 aa10.93□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Tbc1d31Q6NXY1 996 aa10.93□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Q8BZJ8 459 aa10.93□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Pik3ap1Q9EQ32 811 aa10.93□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Rapgef4Q9EQZ6 1011 aa10.93□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Sdc2P43407 202 aa10.93□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Oxsr1Q6P9R2 527 aa10.93□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Zkscan8Q8BSL0 588 aa10.93□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Zfp317Q8C0Q5 607 aa10.93□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Ttc27Q8CD92 847 aa10.93□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Ccdc150Q8CDI7 1110 aa10.93□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Frat2Q8K025 231 aa10.93□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Baiap2l1Q9DBJ3 514 aa10.93□□□□□ -0.66
Col6a1-201ENSMUST00000001147 AceP09470 1312 aa10.92□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Bicdl1A0JNT9 577 aa10.92□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Serpinb6bO08804 377 aa10.92□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Gng11P61953 73 aa10.92□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Pla2g4fQ50L41 855 aa10.92□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Riok1Q922Q2 567 aa10.92□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Atp12aQ9Z1W8 1035 aa10.92□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Mcm6P97311 821 aa10.92□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Ccdc129Q14B48 1034 aa10.92□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Ctdnep1Q3TP92 244 aa10.92□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Pram1Q6BCL1 675 aa10.92□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Ift122Q6NWV3 1182 aa10.92□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Ncoa5Q91W39 579 aaKnown RBP10.92□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Tbc1d4Q8BYJ6 1307 aa10.92□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Ano8Q6PB70 1060 aa10.92□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Xpo4Q9ESJ0 1151 aa10.92□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Elf2Q9JHC9 593 aa10.92□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Gm45140A0A0N4SUM8 220 aa10.91□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Arid4aF8VPQ2 1261 aaKnown RBP10.91□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Rrp1P56183 494 aaKnown RBP10.91□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Lins1Q3U1D0 764 aa10.91□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Ehmt1Q5DW34 1296 aa10.91□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Trim56Q80VI1 734 aaKnown RBP10.91□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Maats1Q8BRC6 783 aa10.91□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Kcnk13Q8R1P5 405 aa10.91□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Ankrd1Q9CR42 319 aa10.91□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Mapk8ip1Q9WVI9 707 aa10.91□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Fam160b2Q80YR2 744 aa10.91□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Ppp1r37Q8BKR5 712 aa10.91□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Phf23Q8BSN5 401 aa10.91□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Klhl30Q8C3F7 581 aa10.91□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Zfp202Q8C879 641 aa10.91□□□□□ -0.66
Col6a1-201ENSMUST00000001147 SfswapQ3USH5 945 aaKnown RBP10.91□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Nat10Q8K224 1024 aaKnown RBP10.91□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Pet2A2AHY8 747 aa10.9□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Dync1i1O88485 628 aa10.9□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Ncaph2Q8BSP2 607 aa10.9□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Clic4Q9QYB1 253 aa10.9□□□□□ -0.66
Col6a1-201ENSMUST00000001147 GmnnO88513 206 aa10.9□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Gtpbp4Q99ME9 634 aaKnown RBP10.9□□□□□ -0.66
Col6a1-201ENSMUST00000001147 NgdnQ9DB96 315 aaKnown RBP10.9□□□□□ -0.66
Col6a1-201ENSMUST00000001147 InsrrQ9WTL4 1300 aa10.9□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Kansl3A2RSY1 903 aaKnown RBP10.9□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Iqsec3Q3TES0 1195 aa10.9□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Mctp2Q5RJH2 878 aa10.9□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Abcf1Q6P542 837 aaKnown RBP10.9□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Lrrc8aQ80WG5 810 aa10.9□□□□□ -0.66
Col6a1-201ENSMUST00000001147 9230110C19RikQ8CC70 267 aa10.9□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Wasf1Q8R5H6 559 aa10.9□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Ipo7Q9EPL8 1038 aaKnown RBP10.9□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Hecw2Q6I6G8 1578 aa10.9□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Ino80Q6ZPV2 1559 aa10.9□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Prl7d1P04769 244 aa10.9□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Tpm4Q6IRU2 248 aa10.9□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Bmp2kQ91Z96 1138 aa10.9□□□□□ -0.67
Col6a1-201ENSMUST00000001147 TsksO54887 585 aa10.89□□□□□ -0.67
Col6a1-201ENSMUST00000001147 NfkbibQ60778 359 aa10.89□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Cfap69Q8BH53 942 aa10.89□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Abcd1P48410 736 aa10.89□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Ccdc34Q3UI66 367 aa10.89□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Kcnf1Q7TSH7 493 aa10.89□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Ubxn10Q8BG34 277 aa10.89□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Tpcn2Q8BWC0 731 aa10.89□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Nup133Q8R0G9 1155 aa10.89□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Hps3Q91VB4 1002 aa10.89□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Dhx30Q99PU8 1217 aaKnown RBP10.89□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Qser1A2BIE1 1698 aa10.89□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Prl3d2F6R3P9 224 aa10.89□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Myo1bP46735 1107 aa10.89□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Nlrp1aQ2LKU9 1182 aa10.89□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Ell2Q3UKU1 639 aa10.89□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Secisbp2lQ6A098 1086 aaKnown RBP10.89□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Slf2Q6P9P0 1278 aa10.89□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Zbtb40Q6PCS8 1258 aa10.89□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 53.7 ms