RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 NANOS1Q8WY41 292 aaKnown RBP15.23■□□□□ 0.03
PHGDH-232ENST00000641947 SPSB4Q96A44 273 aa15.23■□□□□ 0.03
PHGDH-232ENST00000641947 BOD1Q96IK1 185 aa15.23■□□□□ 0.03
PHGDH-232ENST00000641947 CNTD2Q9H8S5 307 aa15.23■□□□□ 0.03
PHGDH-232ENST00000641947 TMEM138Q9NPI0 162 aa15.23■□□□□ 0.03
PHGDH-232ENST00000641947 SMG1Q96Q15 3661 aaKnown RBP15.23■□□□□ 0.03
PHGDH-232ENST00000641947 KALRNO60229 2985 aa15.23■□□□□ 0.03
PHGDH-232ENST00000641947 MEGF11A6BM72 1044 aa15.22■□□□□ 0.03
PHGDH-232ENST00000641947 PRRG2O14669 202 aa15.22■□□□□ 0.03
PHGDH-232ENST00000641947 HTR2CP28335 458 aa15.22■□□□□ 0.03
PHGDH-232ENST00000641947 THBS4P35443 961 aa15.22■□□□□ 0.03
PHGDH-232ENST00000641947 POU3F4P49335 361 aa15.22■□□□□ 0.03
PHGDH-232ENST00000641947 PYDC2Q56P42 97 aa15.22■□□□□ 0.03
PHGDH-232ENST00000641947 PGAP1Q75T13 922 aa15.22■□□□□ 0.03
PHGDH-232ENST00000641947 IZUMO1Q8IYV9 350 aa15.22■□□□□ 0.03
PHGDH-232ENST00000641947 C1orf162Q8NEQ5 155 aaPredicted RBP15.22■□□□□ 0.03
PHGDH-232ENST00000641947 FAM3DQ96BQ1 224 aa15.22■□□□□ 0.03
PHGDH-232ENST00000641947 ZFP3Q96NJ6 502 aa15.22■□□□□ 0.03
PHGDH-232ENST00000641947 SH3BGRL2Q9UJC5 107 aa15.22■□□□□ 0.03
PHGDH-232ENST00000641947 SERPINA5P05154 406 aa15.21■□□□□ 0.03
PHGDH-232ENST00000641947 HOXD4P09016 255 aaPredicted RBP15.21■□□□□ 0.03
PHGDH-232ENST00000641947 IL7P13232 177 aa15.21■□□□□ 0.03
PHGDH-232ENST00000641947 PLP2Q04941 152 aa15.21■□□□□ 0.03
PHGDH-232ENST00000641947 KLRB1Q12918 225 aa15.21■□□□□ 0.03
PHGDH-232ENST00000641947 C2orf76Q3KRA6 126 aa15.21■□□□□ 0.03
PHGDH-232ENST00000641947 OR8H2Q8N162 312 aa15.21■□□□□ 0.03
PHGDH-232ENST00000641947 SLC30A7Q8NEW0 376 aa15.21■□□□□ 0.03
PHGDH-232ENST00000641947 SEMA6DQ8NFY4 1073 aa15.21■□□□□ 0.03
PHGDH-232ENST00000641947 OR6M1Q8NGM8 313 aa15.21■□□□□ 0.03
PHGDH-232ENST00000641947 SYNPRQ8TBG9 265 aa15.21■□□□□ 0.03
PHGDH-232ENST00000641947 ABHD1Q96SE0 405 aa15.21■□□□□ 0.03
PHGDH-232ENST00000641947 CHST5Q9GZS9 411 aa15.21■□□□□ 0.03
PHGDH-232ENST00000641947 METTL17Q9H7H0 456 aaPredicted RBP15.21■□□□□ 0.03
PHGDH-232ENST00000641947 ETV7Q9Y603 341 aa15.21■□□□□ 0.03
PHGDH-232ENST00000641947 A0A0G2JNJ9 132 aa15.21■□□□□ 0.02
PHGDH-232ENST00000641947 TMEM272A0A1B0GTI8 110 aa15.21■□□□□ 0.02
PHGDH-232ENST00000641947 MTRF1O75570 445 aaKnown RBP15.21■□□□□ 0.02
PHGDH-232ENST00000641947 AGFG2O95081 481 aa15.21■□□□□ 0.02
PHGDH-232ENST00000641947 GSK3AP49840 483 aa15.21■□□□□ 0.02
PHGDH-232ENST00000641947 UBE2NP61088 152 aaKnown RBP15.21■□□□□ 0.02
PHGDH-232ENST00000641947 PMPCAQ10713 525 aa15.21■□□□□ 0.02
PHGDH-232ENST00000641947 OR8B8Q15620 311 aa15.21■□□□□ 0.02
PHGDH-232ENST00000641947 EIF2S3LQ2VIR3 472 aaKnown RBP15.21■□□□□ 0.02
PHGDH-232ENST00000641947 RFPL4BQ6ZWI9 263 aa15.21■□□□□ 0.02
PHGDH-232ENST00000641947 GDPD1Q8N9F7 314 aa15.21■□□□□ 0.02
PHGDH-232ENST00000641947 NPRL2Q8WTW4 380 aa15.21■□□□□ 0.02
PHGDH-232ENST00000641947 CMTM3Q96MX0 182 aa15.21■□□□□ 0.02
PHGDH-232ENST00000641947 SFXN3Q9BWM7 321 aa15.21■□□□□ 0.02
PHGDH-232ENST00000641947 SP140LQ9H930 580 aa15.21■□□□□ 0.02
PHGDH-232ENST00000641947 RHBDL2Q9NX52 303 aa15.21■□□□□ 0.02
PHGDH-232ENST00000641947 CRIM1Q9NZV1 1036 aa15.21■□□□□ 0.02
PHGDH-232ENST00000641947 Q9UFV3 132 aa15.21■□□□□ 0.02
PHGDH-232ENST00000641947 TBC1D24Q9ULP9 559 aa15.21■□□□□ 0.02
PHGDH-232ENST00000641947 STARD10Q9Y365 291 aa15.21■□□□□ 0.02
PHGDH-232ENST00000641947 A0A1W2PQ09 198 aa15.2■□□□□ 0.02
PHGDH-232ENST00000641947 XRCC2O43543 280 aa15.2■□□□□ 0.02
PHGDH-232ENST00000641947 PTBP1P26599 531 aaKnown RBP eCLIP15.2■□□□□ 0.02
PHGDH-232ENST00000641947 APLNRP35414 380 aa15.2■□□□□ 0.02
PHGDH-232ENST00000641947 IDH3GP51553 393 aaPredicted RBP15.2■□□□□ 0.02
PHGDH-232ENST00000641947 GK2Q14410 553 aaPredicted RBP15.2■□□□□ 0.02
PHGDH-232ENST00000641947 HLXQ14774 488 aaPredicted RBP15.2■□□□□ 0.02
PHGDH-232ENST00000641947 RGS21Q2M5E4 152 aa15.2■□□□□ 0.02
PHGDH-232ENST00000641947 UTS2BQ765I0 119 aa15.2■□□□□ 0.02
PHGDH-232ENST00000641947 MRI1Q9BV20 369 aa15.2■□□□□ 0.02
PHGDH-232ENST00000641947 C1QTNF6Q9BXI9 259 aa15.2■□□□□ 0.02
PHGDH-232ENST00000641947 ABCG5Q9H222 651 aa15.2■□□□□ 0.02
PHGDH-232ENST00000641947 RGCCQ9H4X1 137 aa15.2■□□□□ 0.02
PHGDH-232ENST00000641947 HEATR1Q9H583 2144 aaKnown RBP15.2■□□□□ 0.02
PHGDH-232ENST00000641947 LOC100289279A0A1B0GTE1 492 aa15.19■□□□□ 0.02
PHGDH-232ENST00000641947 DHRS7CA6NNS2 312 aa15.19■□□□□ 0.02
PHGDH-232ENST00000641947 LDLRAD4O15165 306 aa15.19■□□□□ 0.02
PHGDH-232ENST00000641947 HOXD11P31277 338 aaPredicted RBP15.19■□□□□ 0.02
PHGDH-232ENST00000641947 TALDO1P37837 337 aa15.19■□□□□ 0.02
PHGDH-232ENST00000641947 PITPNBP48739 271 aa15.19■□□□□ 0.02
PHGDH-232ENST00000641947 SCAND1P57086 179 aa15.19■□□□□ 0.02
PHGDH-232ENST00000641947 LY6DQ14210 128 aa15.19■□□□□ 0.02
PHGDH-232ENST00000641947 ESPL1Q14674 2120 aa15.19■□□□□ 0.02
PHGDH-232ENST00000641947 P2RY6Q15077 328 aa15.19■□□□□ 0.02
PHGDH-232ENST00000641947 OR10K2Q6IF99 312 aa15.19■□□□□ 0.02
PHGDH-232ENST00000641947 BEND4Q6ZU67 534 aa15.19■□□□□ 0.02
PHGDH-232ENST00000641947 BHLHA15Q7RTS1 189 aaPredicted RBP15.19■□□□□ 0.02
PHGDH-232ENST00000641947 Q8N402 240 aa15.19■□□□□ 0.02
PHGDH-232ENST00000641947 CCDC54Q8NEL0 328 aa15.19■□□□□ 0.02
PHGDH-232ENST00000641947 CHPT1Q8WUD6 406 aa15.19■□□□□ 0.02
PHGDH-232ENST00000641947 PP6455Q8WZ26 134 aa15.19■□□□□ 0.02
PHGDH-232ENST00000641947 APOBEC3DQ96AK3 386 aaPredicted RBP15.19■□□□□ 0.02
PHGDH-232ENST00000641947 HAVCR1Q96D42 359 aa15.19■□□□□ 0.02
PHGDH-232ENST00000641947 OR51B6Q9H340 312 aa15.19■□□□□ 0.02
PHGDH-232ENST00000641947 GPR173Q9NS66 373 aa15.19■□□□□ 0.02
PHGDH-232ENST00000641947 PTTG3PQ9NZH4 202 aa15.19■□□□□ 0.02
PHGDH-232ENST00000641947 MYEF2Q9P2K5 600 aaKnown RBP15.19■□□□□ 0.02
PHGDH-232ENST00000641947 ZNF391Q9UJN7 358 aa15.19■□□□□ 0.02
PHGDH-232ENST00000641947 TPRP12270 2363 aaKnown RBP15.19■□□□□ 0.02
PHGDH-232ENST00000641947 LANCL1O43813 399 aa15.19■□□□□ 0.02
PHGDH-232ENST00000641947 ZNF93P35789 620 aaPredicted RBP15.19■□□□□ 0.02
PHGDH-232ENST00000641947 OR3A4PP47883 348 aa15.19■□□□□ 0.02
PHGDH-232ENST00000641947 RIPPLY1Q0D2K3 151 aa15.19■□□□□ 0.02
PHGDH-232ENST00000641947 TMEM42Q69YG0 159 aa15.19■□□□□ 0.02
PHGDH-232ENST00000641947 PCSK4Q6UW60 755 aa15.19■□□□□ 0.02
PHGDH-232ENST00000641947 CCDC36Q8IYA8 594 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms