RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 AIG1Q9NVV5 245 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 TAS2R8Q9NYW2 309 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 TPRP12270 2363 aaKnown RBP3.87□□□□□ -1.79
SCN3A-209ENST00000639244 SORL1Q92673 2214 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 TRAV38-1A0A0B4J264 116 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 A0A0G2JMM0 328 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 KIR2DS1A0A191URI9 304 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 A0A1W2PPB8 328 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 A0A1W2PRX2 142 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 KIR3DP1A8MWS1 328 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 DIRAS1O95057 198 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 GPR75O95800 540 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 NUDT3O95989 172 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 ACTL6AO96019 429 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 SERPINE2P07093 398 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 FAHP16930 419 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 ZNF19P17023 458 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 NTSP30990 170 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 KEAP1Q14145 624 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 KIR2DS1Q14954 304 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 PDCD1Q15116 288 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 ASCL4Q6XD76 172 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 ARHGEF39Q8N4T4 335 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 SIDT2Q8NBJ9 832 aaKnown RBP3.87□□□□□ -1.79
SCN3A-209ENST00000639244 GLYATL1Q969I3 302 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 GRAMD2BQ96HH9 432 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 ZNF587Q96SQ5 575 aaPredicted RBP3.87□□□□□ -1.79
SCN3A-209ENST00000639244 SELENOIQ9C0D9 397 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 WNT6Q9Y6F9 365 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 NWD1Q149M9 1564 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 A0A1B0GU03 582 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 RAB27BO00194 218 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 HLA-DQB1P01920 261 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 OPN1SWP03999 348 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 IGKV5-2P06315 115 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 CTSDP07339 412 aaPredicted RBP3.87□□□□□ -1.79
SCN3A-209ENST00000639244 COL9A1P20849 921 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 CHATP28329 748 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 MTNR1BP49286 362 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 GPM6AP51674 278 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 F2RL1P55085 397 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 OR12D2P58182 307 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 BCL2L1Q07817 233 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 PSG5Q15238 335 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 ALG10BQ5I7T1 473 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 DCAF12L1Q5VU92 463 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 GKN2Q86XP6 184 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 ACY3Q96HD9 319 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 FAIM2Q9BWQ8 316 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 MAP1LC3AQ9H492 121 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 BPIFA1Q9NP55 256 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 FAM206AQ9NX38 181 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 ICAM5Q9UMF0 924 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 WDR45Q9Y484 360 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 OTOL1A6NHN0 477 aaPredicted RBP3.87□□□□□ -1.79
SCN3A-209ENST00000639244 UPK3BL1B0FP48 263 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 C21orf140B9A014 251 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 UPK3BL2E5RIL1 263 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 M0R082 166 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 TRAPPC6AO75865 159 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 CLDN1O95832 211 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 APODP05090 189 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 BCL6P41182 706 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 ST3GAL1Q11201 340 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 PARS2Q7L3T8 475 aaKnown RBP3.87□□□□□ -1.79
SCN3A-209ENST00000639244 OR51T1Q8NGJ9 327 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 ZNF417Q8TAU3 575 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 TMEM176AQ96HP8 235 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 CDK15Q96Q40 435 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 RTP3Q9BQQ7 232 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 ERG28Q9UKR5 140 aa3.87□□□□□ -1.79
SCN3A-209ENST00000639244 SHANK1Q9Y566 2161 aa3.86□□□□□ -1.79
SCN3A-209ENST00000639244 TMEM50AO95807 157 aa3.86□□□□□ -1.79
SCN3A-209ENST00000639244 NPY1RP25929 384 aa3.86□□□□□ -1.79
SCN3A-209ENST00000639244 OPRD1P41143 372 aa3.86□□□□□ -1.79
SCN3A-209ENST00000639244 CLRN1P58418 232 aa3.86□□□□□ -1.79
SCN3A-209ENST00000639244 ZNF266Q14584 549 aa3.86□□□□□ -1.79
SCN3A-209ENST00000639244 NR0B2Q15466 257 aa3.86□□□□□ -1.79
SCN3A-209ENST00000639244 EMC4Q5J8M3 183 aa3.86□□□□□ -1.79
SCN3A-209ENST00000639244 C12orf54Q6X4T0 127 aa3.86□□□□□ -1.79
SCN3A-209ENST00000639244 FAM151AQ8WW52 585 aa3.86□□□□□ -1.79
SCN3A-209ENST00000639244 TMEM106AQ96A25 262 aa3.86□□□□□ -1.79
SCN3A-209ENST00000639244 FCRL5Q96RD9 977 aa3.86□□□□□ -1.79
SCN3A-209ENST00000639244 MAP1BP46821 2468 aaKnown RBP3.86□□□□□ -1.79
SCN3A-209ENST00000639244 RGPD3A6NKT7 1758 aaPredicted RBP3.86□□□□□ -1.79
SCN3A-209ENST00000639244 A0A1W2PQM1 296 aa3.86□□□□□ -1.79
SCN3A-209ENST00000639244 HIST1H1EP10412 219 aaKnown RBP3.86□□□□□ -1.79
SCN3A-209ENST00000639244 NFYBP25208 207 aa3.86□□□□□ -1.79
SCN3A-209ENST00000639244 CD34P28906 385 aa3.86□□□□□ -1.79
SCN3A-209ENST00000639244 POLR2IP36954 125 aaKnown RBP3.86□□□□□ -1.79
SCN3A-209ENST00000639244 RHOBP62745 196 aa3.86□□□□□ -1.79
SCN3A-209ENST00000639244 C6orf226Q5I0X4 101 aa3.86□□□□□ -1.79
SCN3A-209ENST00000639244 Q7L0L9 218 aa3.86□□□□□ -1.79
SCN3A-209ENST00000639244 ATG4DQ86TL0 474 aaPredicted RBP3.86□□□□□ -1.79
SCN3A-209ENST00000639244 RIMKLAQ8IXN7 391 aa3.86□□□□□ -1.79
SCN3A-209ENST00000639244 CISD2Q8N5K1 135 aaKnown RBP3.86□□□□□ -1.79
SCN3A-209ENST00000639244 POC1AQ8NBT0 407 aa3.86□□□□□ -1.79
SCN3A-209ENST00000639244 ZNF548Q8NEK5 533 aaPredicted RBP3.86□□□□□ -1.79
SCN3A-209ENST00000639244 Q8WTZ3 238 aa3.86□□□□□ -1.79
SCN3A-209ENST00000639244 LIN37Q96GY3 246 aaPredicted RBP3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms