RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 GSK3BP49841 420 aa14.61□□□□□ -0.07
CLN6-212ENST00000636020 RABL3Q5HYI8 236 aa14.61□□□□□ -0.07
CLN6-212ENST00000636020 FAM122BQ7Z309 247 aa14.61□□□□□ -0.07
CLN6-212ENST00000636020 TMEM219Q86XT9 240 aa14.61□□□□□ -0.07
CLN6-212ENST00000636020 OR9Q1Q8NGQ5 310 aa14.61□□□□□ -0.07
CLN6-212ENST00000636020 SYT4Q9H2B2 425 aa14.61□□□□□ -0.07
CLN6-212ENST00000636020 C14orf119Q9NWQ9 140 aa14.61□□□□□ -0.07
CLN6-212ENST00000636020 LSM4Q9Y4Z0 139 aaKnown RBP14.61□□□□□ -0.07
CLN6-212ENST00000636020 A0A1W2PQ09 198 aa14.6□□□□□ -0.07
CLN6-212ENST00000636020 IMPA2O14732 288 aa14.6□□□□□ -0.07
CLN6-212ENST00000636020 CD14P08571 375 aa14.6□□□□□ -0.07
CLN6-212ENST00000636020 PAICSP22234 425 aaKnown RBP14.6□□□□□ -0.07
CLN6-212ENST00000636020 RAB13P51153 203 aa14.6□□□□□ -0.07
CLN6-212ENST00000636020 BLCAPP62952 87 aa14.6□□□□□ -0.07
CLN6-212ENST00000636020 MZT1Q08AG7 82 aa14.6□□□□□ -0.07
CLN6-212ENST00000636020 MEP1BQ16820 701 aa14.6□□□□□ -0.07
CLN6-212ENST00000636020 ARSJQ5FYB0 599 aaPredicted RBP14.6□□□□□ -0.07
CLN6-212ENST00000636020 STUMQ69YW2 141 aa14.6□□□□□ -0.07
CLN6-212ENST00000636020 OAFQ86UD1 273 aa14.6□□□□□ -0.07
CLN6-212ENST00000636020 FAM156AQ8NDB6 213 aa14.6□□□□□ -0.07
CLN6-212ENST00000636020 OR5T2Q8NGG2 359 aa14.6□□□□□ -0.07
CLN6-212ENST00000636020 RASSF5Q8WWW0 418 aa14.6□□□□□ -0.07
CLN6-212ENST00000636020 ASCL2Q99929 193 aa14.6□□□□□ -0.07
CLN6-212ENST00000636020 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.59□□□□□ -0.07
CLN6-212ENST00000636020 GGT3PA6NGU5 568 aa14.59□□□□□ -0.07
CLN6-212ENST00000636020 NKX6-3A6NJ46 265 aa14.59□□□□□ -0.07
CLN6-212ENST00000636020 H0YAE9 185 aa14.59□□□□□ -0.07
CLN6-212ENST00000636020 ALDOBP05062 364 aa14.59□□□□□ -0.07
CLN6-212ENST00000636020 CCDC159P0C7I6 412 aa14.59□□□□□ -0.07
CLN6-212ENST00000636020 LYL1P12980 280 aa14.59□□□□□ -0.07
CLN6-212ENST00000636020 GRK5P34947 590 aa14.59□□□□□ -0.07
CLN6-212ENST00000636020 GGT2P36268 569 aa14.59□□□□□ -0.07
CLN6-212ENST00000636020 STX1BP61266 288 aa14.59□□□□□ -0.07
CLN6-212ENST00000636020 ZNF92Q03936 586 aa14.59□□□□□ -0.07
CLN6-212ENST00000636020 SELPLGQ14242 412 aa14.59□□□□□ -0.07
CLN6-212ENST00000636020 WDR86Q86TI4 376 aa14.59□□□□□ -0.07
CLN6-212ENST00000636020 OR13C2Q8NGS9 318 aa14.59□□□□□ -0.07
CLN6-212ENST00000636020 MYDGFQ969H8 173 aa14.59□□□□□ -0.07
CLN6-212ENST00000636020 ZNF570Q96NI8 536 aa14.59□□□□□ -0.07
CLN6-212ENST00000636020 PAIP2Q9BPZ3 127 aaKnown RBP14.59□□□□□ -0.07
CLN6-212ENST00000636020 DNTTIP1Q9H147 329 aa14.59□□□□□ -0.07
CLN6-212ENST00000636020 CCDC167Q9P0B6 97 aa14.59□□□□□ -0.07
CLN6-212ENST00000636020 SLC25A10Q9UBX3 287 aaPredicted RBP14.59□□□□□ -0.07
CLN6-212ENST00000636020 H0YHG0 523 aa14.58□□□□□ -0.08
CLN6-212ENST00000636020 F2RL2O00254 374 aa14.58□□□□□ -0.08
CLN6-212ENST00000636020 BHLHE40O14503 412 aa14.58□□□□□ -0.08
CLN6-212ENST00000636020 SDHAP31040 664 aa14.58□□□□□ -0.08
CLN6-212ENST00000636020 TRAP1Q12931 704 aaKnown RBP14.58□□□□□ -0.08
CLN6-212ENST00000636020 DGUOKQ16854 277 aa14.58□□□□□ -0.08
CLN6-212ENST00000636020 PGM2L1Q6PCE3 622 aa14.58□□□□□ -0.08
CLN6-212ENST00000636020 WDR82Q6UXN9 313 aa14.58□□□□□ -0.08
CLN6-212ENST00000636020 CFAP77Q6ZQR2 320 aa14.58□□□□□ -0.08
CLN6-212ENST00000636020 ZNF788Q6ZQV5 615 aa14.58□□□□□ -0.08
CLN6-212ENST00000636020 CCDC80Q76M96 950 aa14.58□□□□□ -0.08
CLN6-212ENST00000636020 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.58□□□□□ -0.08
CLN6-212ENST00000636020 MRPL41Q8IXM3 137 aaKnown RBP14.58□□□□□ -0.08
CLN6-212ENST00000636020 DYNAPQ8N1N2 210 aa14.58□□□□□ -0.08
CLN6-212ENST00000636020 NUAK2Q9H093 628 aa14.58□□□□□ -0.08
CLN6-212ENST00000636020 NMNAT1Q9HAN9 279 aaPredicted RBP14.58□□□□□ -0.08
CLN6-212ENST00000636020 VSX1Q9NZR4 365 aaPredicted RBP14.58□□□□□ -0.08
CLN6-212ENST00000636020 NKX1-2Q9UD57 310 aaPredicted RBP14.58□□□□□ -0.08
CLN6-212ENST00000636020 ZMAT5Q9UDW3 170 aaKnown RBP14.58□□□□□ -0.08
CLN6-212ENST00000636020 ZNF391Q9UJN7 358 aa14.58□□□□□ -0.08
CLN6-212ENST00000636020 FAM90A8PA6NJQ4 464 aa14.57□□□□□ -0.08
CLN6-212ENST00000636020 EFCAB9A8MZ26 197 aa14.57□□□□□ -0.08
CLN6-212ENST00000636020 ANOS1P23352 680 aa14.57□□□□□ -0.08
CLN6-212ENST00000636020 POU1F1P28069 291 aa14.57□□□□□ -0.08
CLN6-212ENST00000636020 SLC9A3P48764 834 aa14.57□□□□□ -0.08
CLN6-212ENST00000636020 CAV3P56539 151 aa14.57□□□□□ -0.08
CLN6-212ENST00000636020 MTPNP58546 118 aa14.57□□□□□ -0.08
CLN6-212ENST00000636020 CSNK2BP67870 215 aa14.57□□□□□ -0.08
CLN6-212ENST00000636020 DGCR2P98153 550 aa14.57□□□□□ -0.08
CLN6-212ENST00000636020 PRKCDQ05655 676 aa14.57□□□□□ -0.08
CLN6-212ENST00000636020 KRR1Q13601 381 aaKnown RBP14.57□□□□□ -0.08
CLN6-212ENST00000636020 SNAI3Q3KNW1 292 aa14.57□□□□□ -0.08
CLN6-212ENST00000636020 TSEN54Q7Z6J9 526 aaKnown RBP14.57□□□□□ -0.08
CLN6-212ENST00000636020 CENPVQ7Z7K6 275 aaPredicted RBP14.57□□□□□ -0.08
CLN6-212ENST00000636020 NRMQ8IXM6 262 aa14.57□□□□□ -0.08
CLN6-212ENST00000636020 MKXQ8IYA7 352 aa14.57□□□□□ -0.08
CLN6-212ENST00000636020 OR2AE1Q8NHA4 323 aa14.57□□□□□ -0.08
CLN6-212ENST00000636020 MED30Q96HR3 178 aa14.57□□□□□ -0.08
CLN6-212ENST00000636020 GAFA1Q96PS6 74 aa14.57□□□□□ -0.08
CLN6-212ENST00000636020 PITX2Q99697 317 aa14.57□□□□□ -0.08
CLN6-212ENST00000636020 ATF6BQ99941 703 aa14.57□□□□□ -0.08
CLN6-212ENST00000636020 HAO2Q9NYQ3 351 aa14.57□□□□□ -0.08
CLN6-212ENST00000636020 PITPNC1Q9UKF7 332 aa14.57□□□□□ -0.08
CLN6-212ENST00000636020 PLECQ15149 4684 aaKnown RBP14.57□□□□□ -0.08
CLN6-212ENST00000636020 IFNW1P05000 195 aa14.56□□□□□ -0.08
CLN6-212ENST00000636020 NDUFB7P17568 137 aa14.56□□□□□ -0.08
CLN6-212ENST00000636020 MDH1P40925 334 aaKnown RBP14.56□□□□□ -0.08
CLN6-212ENST00000636020 NAA10P41227 235 aaPredicted RBP14.56□□□□□ -0.08
CLN6-212ENST00000636020 OR1E2P47887 323 aa14.56□□□□□ -0.08
CLN6-212ENST00000636020 TPTEP56180 551 aa14.56□□□□□ -0.08
CLN6-212ENST00000636020 LGALS4P56470 323 aa14.56□□□□□ -0.08
CLN6-212ENST00000636020 ST3GAL3Q11203 375 aa14.56□□□□□ -0.08
CLN6-212ENST00000636020 PLA1AQ53H76 456 aa14.56□□□□□ -0.08
CLN6-212ENST00000636020 SLC18B1Q6NT16 456 aa14.56□□□□□ -0.08
CLN6-212ENST00000636020 UNQ9370/PRO34162Q6UXP9 181 aa14.56□□□□□ -0.08
CLN6-212ENST00000636020 DPY19L4Q7Z388 723 aa14.56□□□□□ -0.08
CLN6-212ENST00000636020 LHFPL4Q7Z7J7 247 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms