RNA–Protein interactions for RNA: ENST00000635997.1

NEDD4L-238, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, human

TSL 5 BASIC

Gene NEDD4L, Length 4,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4L-238	ENST00000635997	C1QB	P02746	253 aa		12.8	□□□□□ -0.36
NEDD4L-238	ENST00000635997	TUBG1	P23258	451 aa		12.8	□□□□□ -0.36
NEDD4L-238	ENST00000635997	CDK2	P24941	298 aa		12.8	□□□□□ -0.36
NEDD4L-238	ENST00000635997	HAAO	P46952	286 aa		12.8	□□□□□ -0.36
NEDD4L-238	ENST00000635997	SORD	Q00796	357 aa		12.8	□□□□□ -0.36
NEDD4L-238	ENST00000635997	SLC25A35	Q3KQZ1	300 aa		12.8	□□□□□ -0.36
NEDD4L-238	ENST00000635997	RHOU	Q7L0Q8	258 aa		12.8	□□□□□ -0.36
NEDD4L-238	ENST00000635997	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	12.8	□□□□□ -0.36
NEDD4L-238	ENST00000635997	FBXO17	Q96EF6	278 aa		12.8	□□□□□ -0.36
NEDD4L-238	ENST00000635997	SIRPB1	O00241	398 aa		12.8	□□□□□ -0.36
NEDD4L-238	ENST00000635997	DEGS1	O15121	323 aa		12.8	□□□□□ -0.36
NEDD4L-238	ENST00000635997	TCRB	P04435	133 aa		12.8	□□□□□ -0.36
NEDD4L-238	ENST00000635997	FGF5	P12034	268 aa		12.8	□□□□□ -0.36
NEDD4L-238	ENST00000635997	SUMO3	P55854	103 aa	Predicted RBP	12.8	□□□□□ -0.36
NEDD4L-238	ENST00000635997	FGL1	Q08830	312 aa		12.8	□□□□□ -0.36
NEDD4L-238	ENST00000635997	USF2	Q15853	346 aa	Predicted RBP	12.8	□□□□□ -0.36
NEDD4L-238	ENST00000635997	ALKAL2	Q6UX46	152 aa		12.8	□□□□□ -0.36
NEDD4L-238	ENST00000635997	ST6GAL2	Q96JF0	529 aa		12.8	□□□□□ -0.36
NEDD4L-238	ENST00000635997	TMEM68	Q96MH6	324 aa		12.8	□□□□□ -0.36
NEDD4L-238	ENST00000635997	UBL7	Q96S82	380 aa	Predicted RBP	12.8	□□□□□ -0.36
NEDD4L-238	ENST00000635997	OCSTAMP	Q9BR26	566 aa		12.8	□□□□□ -0.36
NEDD4L-238	ENST00000635997	RAB22A	Q9UL26	194 aa		12.8	□□□□□ -0.36
NEDD4L-238	ENST00000635997	PRSS23	O95084	383 aa		12.79	□□□□□ -0.36
NEDD4L-238	ENST00000635997	REEP6	Q96HR9	211 aa		12.79	□□□□□ -0.36
NEDD4L-238	ENST00000635997	SPIN2A	Q99865	258 aa		12.79	□□□□□ -0.36
NEDD4L-238	ENST00000635997	SPIN2B	Q9BPZ2	258 aa		12.79	□□□□□ -0.36
NEDD4L-238	ENST00000635997	BARHL1	Q9BZE3	327 aa		12.79	□□□□□ -0.36
NEDD4L-238	ENST00000635997	ZMAT5	Q9UDW3	170 aa	Known RBP	12.79	□□□□□ -0.36
NEDD4L-238	ENST00000635997	THADA	Q6YHU6	1953 aa		12.79	□□□□□ -0.36
NEDD4L-238	ENST00000635997		A0A087WZY1	265 aa		12.79	□□□□□ -0.36
NEDD4L-238	ENST00000635997	ZNF254	O75437	659 aa		12.79	□□□□□ -0.36
NEDD4L-238	ENST00000635997	ZNF250	P15622	560 aa		12.79	□□□□□ -0.36
NEDD4L-238	ENST00000635997	CPE	P16870	476 aa		12.79	□□□□□ -0.36
NEDD4L-238	ENST00000635997	C2orf76	Q3KRA6	126 aa		12.79	□□□□□ -0.36
NEDD4L-238	ENST00000635997	SYS1	Q8N2H4	156 aa		12.79	□□□□□ -0.36
NEDD4L-238	ENST00000635997	SUCNR1	Q9BXA5	334 aa		12.79	□□□□□ -0.36
NEDD4L-238	ENST00000635997	NDUFB11	Q9NX14	153 aa		12.79	□□□□□ -0.36
NEDD4L-238	ENST00000635997	SLC23A1	Q9UHI7	598 aa		12.79	□□□□□ -0.36
NEDD4L-238	ENST00000635997	USF3	Q68DE3	2245 aa		12.79	□□□□□ -0.36
NEDD4L-238	ENST00000635997	SERTM1	A2A2V5	107 aa		12.79	□□□□□ -0.36
NEDD4L-238	ENST00000635997	TOR1A	O14656	332 aa		12.79	□□□□□ -0.36
NEDD4L-238	ENST00000635997	RAD52	P43351	418 aa		12.79	□□□□□ -0.36
NEDD4L-238	ENST00000635997	MAGEA5	P43359	124 aa		12.79	□□□□□ -0.36
NEDD4L-238	ENST00000635997	CAMLG	P49069	296 aa		12.79	□□□□□ -0.36
NEDD4L-238	ENST00000635997	UBE2M	P61081	183 aa	Known RBP	12.79	□□□□□ -0.36
NEDD4L-238	ENST00000635997	CYCS	P99999	105 aa	Known RBP	12.79	□□□□□ -0.36
NEDD4L-238	ENST00000635997	TPBG	Q13641	420 aa		12.79	□□□□□ -0.36
NEDD4L-238	ENST00000635997	RBMS2	Q15434	407 aa	Known RBP	12.79	□□□□□ -0.36
NEDD4L-238	ENST00000635997	FAM198B	Q6UWH4	519 aa		12.79	□□□□□ -0.36
NEDD4L-238	ENST00000635997	C17orf107	Q6ZR85	190 aa		12.79	□□□□□ -0.36
NEDD4L-238	ENST00000635997	C9orf40	Q8IXQ3	194 aa		12.79	□□□□□ -0.36
NEDD4L-238	ENST00000635997	DND1	Q8IYX4	353 aa	Known RBP	12.79	□□□□□ -0.36
NEDD4L-238	ENST00000635997	OR1J1	Q8NGS3	322 aa		12.79	□□□□□ -0.36
NEDD4L-238	ENST00000635997	PELI1	Q96FA3	418 aa		12.79	□□□□□ -0.36
NEDD4L-238	ENST00000635997	TMEM43	Q9BTV4	400 aa		12.79	□□□□□ -0.36
NEDD4L-238	ENST00000635997	ZCCHC4	Q9H5U6	513 aa		12.79	□□□□□ -0.36
NEDD4L-238	ENST00000635997	LRP12	Q9Y561	859 aa		12.79	□□□□□ -0.36
NEDD4L-238	ENST00000635997	WDR1	O75083	606 aa		12.78	□□□□□ -0.36
NEDD4L-238	ENST00000635997	GLS	O94925	669 aa	Predicted RBP	12.78	□□□□□ -0.36
NEDD4L-238	ENST00000635997	ZFPL1	O95159	310 aa		12.78	□□□□□ -0.36
NEDD4L-238	ENST00000635997	TMIGD3	P0DMS9	266 aa	Predicted RBP	12.78	□□□□□ -0.36
NEDD4L-238	ENST00000635997	NAGA	P17050	411 aa		12.78	□□□□□ -0.36
NEDD4L-238	ENST00000635997	CSF2RB	P32927	897 aa		12.78	□□□□□ -0.36
NEDD4L-238	ENST00000635997	PTGER4	P35408	488 aa		12.78	□□□□□ -0.36
NEDD4L-238	ENST00000635997	OR2B11	Q5JQS5	317 aa		12.78	□□□□□ -0.36
NEDD4L-238	ENST00000635997	STAC2	Q6ZMT1	411 aa		12.78	□□□□□ -0.36
NEDD4L-238	ENST00000635997	NKAIN3	Q8N8D7	197 aa		12.78	□□□□□ -0.36
NEDD4L-238	ENST00000635997	PLPP5	Q8NEB5	264 aa		12.78	□□□□□ -0.36
NEDD4L-238	ENST00000635997	ZNF680	Q8NEM1	530 aa		12.78	□□□□□ -0.36
NEDD4L-238	ENST00000635997	UCN2	Q96RP3	112 aa		12.78	□□□□□ -0.36
NEDD4L-238	ENST00000635997	TCRBV16S1A1N1	A0A5B0	115 aa		12.78	□□□□□ -0.36
NEDD4L-238	ENST00000635997	ZNF732	B4DXR9	585 aa		12.78	□□□□□ -0.36
NEDD4L-238	ENST00000635997	LIMS3	P0CW19	117 aa		12.78	□□□□□ -0.36
NEDD4L-238	ENST00000635997	LIMS4	P0CW20	117 aa		12.78	□□□□□ -0.36
NEDD4L-238	ENST00000635997	ZNF83	P51522	516 aa		12.78	□□□□□ -0.36
NEDD4L-238	ENST00000635997	ZNF546	Q86UE3	836 aa		12.78	□□□□□ -0.36
NEDD4L-238	ENST00000635997	DMBX1	Q8NFW5	382 aa		12.78	□□□□□ -0.36
NEDD4L-238	ENST00000635997	RAB19	A4D1S5	217 aa		12.78	□□□□□ -0.36
NEDD4L-238	ENST00000635997	IFITM5	A6NNB3	132 aa		12.78	□□□□□ -0.36
NEDD4L-238	ENST00000635997	CDX4	O14627	284 aa	Predicted RBP	12.78	□□□□□ -0.36
NEDD4L-238	ENST00000635997	SPRY1	O43609	319 aa	Predicted RBP	12.78	□□□□□ -0.36
NEDD4L-238	ENST00000635997	SNAPC5	O75971	98 aa		12.78	□□□□□ -0.36
NEDD4L-238	ENST00000635997	ZNF32	P17041	273 aa		12.78	□□□□□ -0.36
NEDD4L-238	ENST00000635997	ALOX5AP	P20292	161 aa		12.78	□□□□□ -0.36
NEDD4L-238	ENST00000635997	ZNF774	Q6NX45	483 aa		12.78	□□□□□ -0.36
NEDD4L-238	ENST00000635997	RNF165	Q6ZSG1	346 aa		12.78	□□□□□ -0.36
NEDD4L-238	ENST00000635997	FBXL14	Q8N1E6	418 aa		12.78	□□□□□ -0.36
NEDD4L-238	ENST00000635997	OTOS	Q8NHW6	89 aa		12.78	□□□□□ -0.36
NEDD4L-238	ENST00000635997	KCNJ15	Q99712	375 aa		12.78	□□□□□ -0.36
NEDD4L-238	ENST00000635997	JAM3	Q9BX67	310 aa		12.78	□□□□□ -0.36
NEDD4L-238	ENST00000635997		E9PI62	339 aa		12.78	□□□□□ -0.36
NEDD4L-238	ENST00000635997	CCS	O14618	274 aa		12.78	□□□□□ -0.36
NEDD4L-238	ENST00000635997	TAS2R46	P59540	309 aa		12.78	□□□□□ -0.36
NEDD4L-238	ENST00000635997	FUT7	Q11130	342 aa		12.78	□□□□□ -0.36
NEDD4L-238	ENST00000635997	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	12.78	□□□□□ -0.36
NEDD4L-238	ENST00000635997	CHCHD2P9	Q5T1J5	151 aa	Predicted RBP	12.78	□□□□□ -0.36
NEDD4L-238	ENST00000635997	OR52H1	Q8NGJ2	320 aa		12.78	□□□□□ -0.36
NEDD4L-238	ENST00000635997	EGLN1	Q9GZT9	426 aa		12.78	□□□□□ -0.36
NEDD4L-238	ENST00000635997	SLCO5A1	Q9H2Y9	848 aa		12.78	□□□□□ -0.36
NEDD4L-238	ENST00000635997	WDR54	Q9H977	334 aa		12.78	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms