RNA–Protein interactions for RNA: ENST00000634451.2

LINC00339-206, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-206ENST00000634451 RENP00797 406 aa10.53□□□□□ -0.72
LINC00339-206ENST00000634451 OTX1P32242 354 aaPredicted RBP10.53□□□□□ -0.72
LINC00339-206ENST00000634451 SAA4P35542 130 aa10.53□□□□□ -0.72
LINC00339-206ENST00000634451 MAPRE2Q15555 327 aa10.53□□□□□ -0.72
LINC00339-206ENST00000634451 KPRPQ5T749 579 aaPredicted RBP10.53□□□□□ -0.72
LINC00339-206ENST00000634451 PGM2L1Q6PCE3 622 aa10.53□□□□□ -0.72
LINC00339-206ENST00000634451 CYP4Z1Q86W10 505 aa10.53□□□□□ -0.72
LINC00339-206ENST00000634451 LINC00471Q8N535 108 aa10.53□□□□□ -0.72
LINC00339-206ENST00000634451 OR9Q1Q8NGQ5 310 aa10.53□□□□□ -0.72
LINC00339-206ENST00000634451 AJUBAQ96IF1 538 aa10.53□□□□□ -0.72
LINC00339-206ENST00000634451 DDOQ99489 341 aa10.53□□□□□ -0.72
LINC00339-206ENST00000634451 FGF23Q9GZV9 251 aaPredicted RBP10.53□□□□□ -0.72
LINC00339-206ENST00000634451 WDR13Q9H1Z4 485 aa10.53□□□□□ -0.72
LINC00339-206ENST00000634451 DPAGT1Q9H3H5 408 aa10.53□□□□□ -0.72
LINC00339-206ENST00000634451 EGLN3Q9H6Z9 239 aa10.53□□□□□ -0.72
LINC00339-206ENST00000634451 MRPL15Q9P015 296 aaKnown RBP10.53□□□□□ -0.72
LINC00339-206ENST00000634451 KAAG1Q9UBP8 84 aa10.53□□□□□ -0.72
LINC00339-206ENST00000634451 KPTNQ9Y664 436 aa10.53□□□□□ -0.72
LINC00339-206ENST00000634451 RYR3Q15413 4870 aa10.53□□□□□ -0.72
LINC00339-206ENST00000634451 DNAH3Q8TD57 4116 aa10.52□□□□□ -0.72
LINC00339-206ENST00000634451 A0A1B0GVI7 797 aa10.52□□□□□ -0.73
LINC00339-206ENST00000634451 BHLHE40O14503 412 aa10.52□□□□□ -0.73
LINC00339-206ENST00000634451 ARPC3O15145 178 aa10.52□□□□□ -0.73
LINC00339-206ENST00000634451 GMDSO60547 372 aa10.52□□□□□ -0.73
LINC00339-206ENST00000634451 SASH3O75995 380 aa10.52□□□□□ -0.73
LINC00339-206ENST00000634451 ALX3O95076 343 aa10.52□□□□□ -0.73
LINC00339-206ENST00000634451 GYPBP06028 91 aa10.52□□□□□ -0.73
LINC00339-206ENST00000634451 FBP1P09467 338 aa10.52□□□□□ -0.73
LINC00339-206ENST00000634451 SLC6A6P31641 620 aa10.52□□□□□ -0.73
LINC00339-206ENST00000634451 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.52□□□□□ -0.73
LINC00339-206ENST00000634451 ECH1Q13011 328 aa10.52□□□□□ -0.73
LINC00339-206ENST00000634451 KCNJ8Q15842 424 aa10.52□□□□□ -0.73
LINC00339-206ENST00000634451 KLHL12Q53G59 568 aa10.52□□□□□ -0.73
LINC00339-206ENST00000634451 OXLD1Q5BKU9 147 aa10.52□□□□□ -0.73
LINC00339-206ENST00000634451 HCP5Q6MZN7 132 aa10.52□□□□□ -0.73
LINC00339-206ENST00000634451 WDR82Q6UXN9 313 aa10.52□□□□□ -0.73
LINC00339-206ENST00000634451 DCXRQ7Z4W1 244 aa10.52□□□□□ -0.73
LINC00339-206ENST00000634451 RNF148Q8N7C7 305 aa10.52□□□□□ -0.73
LINC00339-206ENST00000634451 COPS4Q9BT78 406 aa10.52□□□□□ -0.73
LINC00339-206ENST00000634451 ZNF319Q9P2F9 582 aa10.52□□□□□ -0.73
LINC00339-206ENST00000634451 COMMD3-BMI1R4GMX3 469 aa10.52□□□□□ -0.73
LINC00339-206ENST00000634451 MEIOCA2RUB1 952 aa10.51□□□□□ -0.73
LINC00339-206ENST00000634451 ANKRD61A6NGH8 418 aa10.51□□□□□ -0.73
LINC00339-206ENST00000634451 H3BUX3 64 aa10.51□□□□□ -0.73
LINC00339-206ENST00000634451 PIN1P1O15428 100 aa10.51□□□□□ -0.73
LINC00339-206ENST00000634451 CHST1O43916 411 aa10.51□□□□□ -0.73
LINC00339-206ENST00000634451 OPN1MWP04001 364 aa10.51□□□□□ -0.73
LINC00339-206ENST00000634451 SPARCP09486 303 aa10.51□□□□□ -0.73
LINC00339-206ENST00000634451 OPN1MW2P0DN77 364 aa10.51□□□□□ -0.73
LINC00339-206ENST00000634451 OPN1MW3P0DN78 364 aa10.51□□□□□ -0.73
LINC00339-206ENST00000634451 CLUP10909 449 aa10.51□□□□□ -0.73
LINC00339-206ENST00000634451 COX4I1P13073 169 aa10.51□□□□□ -0.73
LINC00339-206ENST00000634451 RHCEP18577 417 aa10.51□□□□□ -0.73
LINC00339-206ENST00000634451 GABRA5P31644 462 aa10.51□□□□□ -0.73
LINC00339-206ENST00000634451 EFNB2P52799 333 aa10.51□□□□□ -0.73
LINC00339-206ENST00000634451 SPIBQ01892 262 aa10.51□□□□□ -0.73
LINC00339-206ENST00000634451 HERPUD1Q15011 391 aa10.51□□□□□ -0.73
LINC00339-206ENST00000634451 DGUOKQ16854 277 aa10.51□□□□□ -0.73
LINC00339-206ENST00000634451 SLC36A3Q495N2 470 aa10.51□□□□□ -0.73
LINC00339-206ENST00000634451 SLC16A9Q7RTY1 509 aa10.51□□□□□ -0.73
LINC00339-206ENST00000634451 KLHDC1Q8N7A1 406 aa10.51□□□□□ -0.73
LINC00339-206ENST00000634451 ZNF511Q8NB15 262 aa10.51□□□□□ -0.73
LINC00339-206ENST00000634451 OR1M1Q8NGA1 313 aa10.51□□□□□ -0.73
LINC00339-206ENST00000634451 OR8D4Q8NGM9 314 aa10.51□□□□□ -0.73
LINC00339-206ENST00000634451 H1FXQ92522 213 aaKnown RBP10.51□□□□□ -0.73
LINC00339-206ENST00000634451 KCTD14Q9BQ13 255 aaPredicted RBP10.51□□□□□ -0.73
LINC00339-206ENST00000634451 DCTN5Q9BTE1 182 aa10.51□□□□□ -0.73
LINC00339-206ENST00000634451 SLC22A4Q9H015 551 aa10.51□□□□□ -0.73
LINC00339-206ENST00000634451 CENPMQ9NSP4 180 aa10.51□□□□□ -0.73
LINC00339-206ENST00000634451 PRPF19Q9UMS4 504 aaKnown RBP10.51□□□□□ -0.73
LINC00339-206ENST00000634451 ZNF281Q9Y2X9 895 aa10.51□□□□□ -0.73
LINC00339-206ENST00000634451 FAM32AQ9Y421 112 aaKnown RBP10.51□□□□□ -0.73
LINC00339-206ENST00000634451 CDIPTO14735 213 aa10.5□□□□□ -0.73
LINC00339-206ENST00000634451 TBX1O43435 398 aa10.5□□□□□ -0.73
LINC00339-206ENST00000634451 NDUFA2O43678 99 aa10.5□□□□□ -0.73
LINC00339-206ENST00000634451 ECDO95905 644 aaPredicted RBP10.5□□□□□ -0.73
LINC00339-206ENST00000634451 SEMG1P04279 462 aa10.5□□□□□ -0.73
LINC00339-206ENST00000634451 NOS3P29474 1203 aa10.5□□□□□ -0.73
LINC00339-206ENST00000634451 MSX2P35548 267 aaPredicted RBP10.5□□□□□ -0.73
LINC00339-206ENST00000634451 TGFBR2P37173 567 aa10.5□□□□□ -0.73
LINC00339-206ENST00000634451 TGM4P49221 684 aa10.5□□□□□ -0.73
LINC00339-206ENST00000634451 NUDT2P50583 147 aa10.5□□□□□ -0.73
LINC00339-206ENST00000634451 ERVFRD-1P60508 538 aa10.5□□□□□ -0.73
LINC00339-206ENST00000634451 FAM3AP98173 230 aa10.5□□□□□ -0.73
LINC00339-206ENST00000634451 HABP2Q14520 560 aaPredicted RBP10.5□□□□□ -0.73
LINC00339-206ENST00000634451 STUMQ69YW2 141 aa10.5□□□□□ -0.73
LINC00339-206ENST00000634451 METAP1DQ6UB28 335 aaPredicted RBP10.5□□□□□ -0.73
LINC00339-206ENST00000634451 ARPINQ7Z6K5 226 aa10.5□□□□□ -0.73
LINC00339-206ENST00000634451 ZDHHC21Q8IVQ6 265 aa10.5□□□□□ -0.73
LINC00339-206ENST00000634451 PLPP7Q8NBV4 271 aa10.5□□□□□ -0.73
LINC00339-206ENST00000634451 PROKR2Q8NFJ6 384 aa10.5□□□□□ -0.73
LINC00339-206ENST00000634451 LRTOMTQ8WZ04 291 aa10.5□□□□□ -0.73
LINC00339-206ENST00000634451 RPL3LQ92901 407 aaKnown RBP10.5□□□□□ -0.73
LINC00339-206ENST00000634451 SPTSSAQ969W0 71 aa10.5□□□□□ -0.73
LINC00339-206ENST00000634451 SLAMF6Q96DU3 332 aa10.5□□□□□ -0.73
LINC00339-206ENST00000634451 GAFA1Q96PS6 74 aa10.5□□□□□ -0.73
LINC00339-206ENST00000634451 AMELYQ99218 206 aa10.5□□□□□ -0.73
LINC00339-206ENST00000634451 ZNF391Q9UJN7 358 aa10.5□□□□□ -0.73
LINC00339-206ENST00000634451 RHBDD3Q9Y3P4 386 aa10.5□□□□□ -0.73
LINC00339-206ENST00000634451 hCG_38984A0A1B0GV85 526 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms