RNA–Protein interactions for RNA: ENST00000628915.2

R3HDM1-220, Transcript of R3H domain containing 1, humanhuman

TSL 5 BASIC

Gene R3HDM1, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-220ENST00000628915 OR2T29Q8NH02 315 aa3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 LCN9Q8WX39 176 aa3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 KCTD7Q96MP8 289 aa3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 ZNF471Q9BX82 626 aaPredicted RBP3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 OR8D2Q9GZM6 311 aa3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 SPATC1LQ9H0A9 340 aa3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 TXNL4BQ9NX01 149 aaKnown RBP3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 KCNIP1Q9NZI2 227 aa3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 COMMD9Q9P000 198 aa3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 CLEC1BQ9P126 229 aa3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 P2RX2Q9UBL9 471 aa3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 DKK4Q9UBT3 224 aa3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 TBX21Q9UL17 535 aa3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 FAM96BQ9Y3D0 163 aa3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 HES2Q9Y543 173 aa3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 SNX10Q9Y5X0 201 aa3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 SIPA1L1O43166 1804 aa3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 COL1A2P08123 1366 aa3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 DAPL1A0PJW8 107 aa3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 ISM1B1AKI9 464 aa3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 FTCDNL1E5RQL4 147 aa3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 PPIAL4DF5H284 164 aa3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 SLC25A12O75746 678 aa3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 EDN2P20800 178 aa3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 ITGB7P26010 798 aa3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 CD34P28906 385 aa3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 GLRXP35754 106 aa3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 RAP2BP61225 183 aa3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 PPIAP62937 165 aaKnown RBP3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 PAFAH1B2P68402 229 aa3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 HBA1P69905 142 aa3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 IAH1Q2TAA2 248 aaPredicted RBP3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 KIRREL2Q6UWL6 708 aa3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 TMPRSS11BQ86T26 416 aa3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 LINC01551Q86U37 167 aa3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 ZDHHC23Q8IYP9 409 aa3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 PLPP5Q8NEB5 264 aa3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 OR5A2Q8NGI9 324 aa3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 JOSD2Q8TAC2 188 aa3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 TWIST2Q8WVJ9 160 aa3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 SOCS4Q8WXH5 440 aa3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 RGP1Q92546 391 aaPredicted RBP3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 HOXB13Q92826 284 aaPredicted RBP3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 GALMQ96C23 342 aa3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 C10orf35Q96D05 121 aa3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 WBP1Q96G27 269 aa3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 MRGPRX2Q96LB1 330 aa3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 SULT4A1Q9BR01 284 aa3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 GBA2Q9HCG7 927 aaPredicted RBP3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 PLAGL1Q9UM63 463 aa3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 B3GALT5Q9Y2C3 310 aa3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 AMDHD2Q9Y303 409 aa3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 CSDC2Q9Y534 153 aaKnown RBP3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 ZFC3H1O60293 1989 aaKnown RBP3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 TRAV39A0A0B4J263 110 aa3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 KIR2DS1A0A191URI9 304 aa3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 TMEM189A5PLL7 270 aa3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 FAM183AA6NL82 134 aa3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 A8MT66 165 aa3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 FAM166BA8MTA8 275 aa3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 TMEM229AB2RXF0 380 aa3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 K7ESF4 209 aa3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 LDB2O43679 373 aa3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 PPP1R11O60927 126 aaPredicted RBP3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 SLC25A27O95847 323 aa3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 C1RP00736 705 aa3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 SCG5P05408 212 aa3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 ATP1B2P14415 290 aaPredicted RBP3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 PSMB4P28070 264 aa3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 OR3A2P47893 321 aa3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 PTH2RP49190 550 aa3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 KIR2DS1Q14954 304 aa3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 UNC50Q53HI1 259 aa3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 AWAT2Q6E213 333 aa3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 C22orf42Q6IC83 251 aa3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 DEFB128Q7Z7B8 93 aa3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 SYS1Q8N2H4 156 aa3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 ZNF664Q8N3J9 261 aa3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 B3GNT7Q8NFL0 401 aa3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 OR1J4Q8NGS1 313 aa3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 LGALS14Q8TCE9 139 aa3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 SH3RF2Q8TEC5 729 aa3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 RNF141Q8WVD5 230 aa3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 HIST1H2BAQ96A08 127 aa3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 PYURFQ96I23 114 aa3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 C12orf42Q96LP6 360 aa3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 NKX3-1Q99801 234 aaPredicted RBP3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 RTP3Q9BQQ7 232 aa3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 WDCPQ9H6R7 721 aa3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 RNF167Q9H6Y7 350 aa3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 REEP1Q9H902 201 aa3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 DCAF13Q9NV06 445 aaKnown RBP3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 AIG1Q9NVV5 245 aa3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 CRIM1Q9NZV1 1036 aa3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 KLHL13Q9P2N7 655 aa3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 CLN8Q9UBY8 286 aa3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 SLC17A4Q9Y2C5 497 aa3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 MMP24Q9Y5R2 645 aa3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 SPIN1Q9Y657 262 aaPredicted RBP3.49□□□□□ -1.85
R3HDM1-220ENST00000628915 TRPM7Q96QT4 1865 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms