RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 ANKRD9Q96BM1 317 aaPredicted RBP6.23□□□□□ -1.41
NEDD9-216ENST00000620854 TSPAN32Q96QS1 320 aa6.23□□□□□ -1.41
NEDD9-216ENST00000620854 LMF2Q9BU23 707 aaKnown RBP6.23□□□□□ -1.41
NEDD9-216ENST00000620854 RHOFQ9HBH0 211 aa6.23□□□□□ -1.41
NEDD9-216ENST00000620854 FAM60AQ9NP50 221 aa6.23□□□□□ -1.41
NEDD9-216ENST00000620854 IGKV1D-42A0A075B6H8 117 aa6.23□□□□□ -1.41
NEDD9-216ENST00000620854 SDCBPO00560 298 aaPredicted RBP6.23□□□□□ -1.41
NEDD9-216ENST00000620854 LRP3O75074 770 aa6.23□□□□□ -1.41
NEDD9-216ENST00000620854 MED6O75586 246 aa6.23□□□□□ -1.41
NEDD9-216ENST00000620854 NKX2-2O95096 273 aa6.23□□□□□ -1.41
NEDD9-216ENST00000620854 ABHD16AO95870 558 aa6.23□□□□□ -1.41
NEDD9-216ENST00000620854 MUC1P15941 1255 aaPredicted RBP6.23□□□□□ -1.41
NEDD9-216ENST00000620854 RCC1P18754 421 aaPredicted RBP6.23□□□□□ -1.41
NEDD9-216ENST00000620854 S100A12P80511 92 aa6.23□□□□□ -1.41
NEDD9-216ENST00000620854 CLINT1Q14677 625 aa6.23□□□□□ -1.41
NEDD9-216ENST00000620854 TOMM34Q15785 309 aaPredicted RBP6.23□□□□□ -1.41
NEDD9-216ENST00000620854 SLC35D3Q5M8T2 416 aa6.23□□□□□ -1.41
NEDD9-216ENST00000620854 ASPHD2Q6ICH7 369 aa6.23□□□□□ -1.41
NEDD9-216ENST00000620854 MED25Q71SY5 747 aa6.23□□□□□ -1.41
NEDD9-216ENST00000620854 OR51F2Q8NH61 342 aa6.23□□□□□ -1.41
NEDD9-216ENST00000620854 RNF141Q8WVD5 230 aa6.23□□□□□ -1.41
NEDD9-216ENST00000620854 MRI1Q9BV20 369 aa6.23□□□□□ -1.41
NEDD9-216ENST00000620854 MFRPQ9BY79 579 aa6.23□□□□□ -1.41
NEDD9-216ENST00000620854 NMNAT2Q9BZQ4 307 aa6.23□□□□□ -1.41
NEDD9-216ENST00000620854 LAT2Q9GZY6 243 aa6.23□□□□□ -1.41
NEDD9-216ENST00000620854 PCED1AQ9H1Q7 454 aa6.23□□□□□ -1.41
NEDD9-216ENST00000620854 CNOT1A5YKK6 2376 aaKnown RBP6.22□□□□□ -1.41
NEDD9-216ENST00000620854 TRBV5-5A0A0J9YX44 114 aa6.22□□□□□ -1.41
NEDD9-216ENST00000620854 LOC101059948A0A1B0GTJ6 334 aa6.22□□□□□ -1.41
NEDD9-216ENST00000620854 A0A1W2PPE3 182 aa6.22□□□□□ -1.41
NEDD9-216ENST00000620854 TLCD2A6NGC4 264 aa6.22□□□□□ -1.41
NEDD9-216ENST00000620854 P2RY10O00398 339 aa6.22□□□□□ -1.41
NEDD9-216ENST00000620854 NQO2P16083 231 aa6.22□□□□□ -1.41
NEDD9-216ENST00000620854 FASLGP48023 281 aa6.22□□□□□ -1.41
NEDD9-216ENST00000620854 MECP2P51608 486 aaKnown RBP6.22□□□□□ -1.41
NEDD9-216ENST00000620854 ESPL1Q14674 2120 aa6.22□□□□□ -1.41
NEDD9-216ENST00000620854 ZNF74Q16587 644 aa6.22□□□□□ -1.41
NEDD9-216ENST00000620854 C9orf135Q5VTT2 229 aa6.22□□□□□ -1.41
NEDD9-216ENST00000620854 PPP1R3BQ86XI6 285 aa6.22□□□□□ -1.41
NEDD9-216ENST00000620854 CDC20BQ86Y33 519 aa6.22□□□□□ -1.41
NEDD9-216ENST00000620854 GPR119Q8TDV5 335 aa6.22□□□□□ -1.41
NEDD9-216ENST00000620854 RSC1A1Q92681 617 aa6.22□□□□□ -1.41
NEDD9-216ENST00000620854 TAAR8Q969N4 342 aa6.22□□□□□ -1.41
NEDD9-216ENST00000620854 NAA11Q9BSU3 229 aaPredicted RBP6.22□□□□□ -1.41
NEDD9-216ENST00000620854 EP300Q09472 2414 aaPredicted RBP6.22□□□□□ -1.41
NEDD9-216ENST00000620854 A0A087WV62 115 aa6.22□□□□□ -1.41
NEDD9-216ENST00000620854 A0A0U1RQK1 487 aa6.22□□□□□ -1.41
NEDD9-216ENST00000620854 RAB19A4D1S5 217 aa6.22□□□□□ -1.41
NEDD9-216ENST00000620854 G3V3Y1 287 aa6.22□□□□□ -1.41
NEDD9-216ENST00000620854 NDUFS6O75380 124 aaKnown RBP6.22□□□□□ -1.41
NEDD9-216ENST00000620854 IDH3GP51553 393 aaPredicted RBP6.22□□□□□ -1.41
NEDD9-216ENST00000620854 FABP9Q0Z7S8 132 aa6.22□□□□□ -1.41
NEDD9-216ENST00000620854 ZNF674Q2M3X9 581 aa6.22□□□□□ -1.41
NEDD9-216ENST00000620854 EIF2S3LQ2VIR3 472 aaKnown RBP6.22□□□□□ -1.41
NEDD9-216ENST00000620854 LYG2Q86SG7 212 aa6.22□□□□□ -1.41
NEDD9-216ENST00000620854 LINC00469Q8N7U9 141 aa6.22□□□□□ -1.41
NEDD9-216ENST00000620854 BCORP1Q8N888 145 aa6.22□□□□□ -1.41
NEDD9-216ENST00000620854 AGBL5Q8NDL9 886 aa6.22□□□□□ -1.41
NEDD9-216ENST00000620854 OR14K1Q8NGZ2 314 aa6.22□□□□□ -1.41
NEDD9-216ENST00000620854 ST7LQ8TDW4 575 aa6.22□□□□□ -1.41
NEDD9-216ENST00000620854 SECTM1Q8WVN6 248 aa6.22□□□□□ -1.41
NEDD9-216ENST00000620854 ASB5Q8WWX0 329 aa6.22□□□□□ -1.41
NEDD9-216ENST00000620854 MCHR2Q969V1 340 aa6.22□□□□□ -1.41
NEDD9-216ENST00000620854 FGGYQ96C11 551 aa6.22□□□□□ -1.41
NEDD9-216ENST00000620854 PIK3IP1Q96FE7 263 aa6.22□□□□□ -1.41
NEDD9-216ENST00000620854 PBDC1Q9BVG4 233 aa6.22□□□□□ -1.41
NEDD9-216ENST00000620854 MMP25Q9NPA2 562 aa6.22□□□□□ -1.41
NEDD9-216ENST00000620854 PRMT8Q9NR22 394 aaPredicted RBP6.22□□□□□ -1.41
NEDD9-216ENST00000620854 FGF21Q9NSA1 209 aa6.22□□□□□ -1.41
NEDD9-216ENST00000620854 MIOXQ9UGB7 285 aa6.22□□□□□ -1.41
NEDD9-216ENST00000620854 PUS1Q9Y606 427 aaKnown RBP eCLIP6.22□□□□□ -1.41
NEDD9-216ENST00000620854 SHANK1Q9Y566 2161 aa6.22□□□□□ -1.41
NEDD9-216ENST00000620854 TGFBR3LH3BV60 316 aa6.22□□□□□ -1.41
NEDD9-216ENST00000620854 ARG1P05089 322 aa6.22□□□□□ -1.41
NEDD9-216ENST00000620854 SFTA3P0C7M3 94 aa6.22□□□□□ -1.41
NEDD9-216ENST00000620854 FCARP24071 287 aa6.22□□□□□ -1.41
NEDD9-216ENST00000620854 ALDH3B1P43353 468 aa6.22□□□□□ -1.41
NEDD9-216ENST00000620854 RPS10P46783 165 aaKnown RBP6.22□□□□□ -1.41
NEDD9-216ENST00000620854 F2RL1P55085 397 aa6.22□□□□□ -1.41
NEDD9-216ENST00000620854 EGR4Q05215 589 aa6.22□□□□□ -1.41
NEDD9-216ENST00000620854 AKR1C8PQ5T2L2 129 aa6.22□□□□□ -1.41
NEDD9-216ENST00000620854 PRAMEF20Q5VT98 475 aa6.22□□□□□ -1.41
NEDD9-216ENST00000620854 FAM57BQ71RH2 274 aa6.22□□□□□ -1.41
NEDD9-216ENST00000620854 RNF144BQ7Z419 303 aa6.22□□□□□ -1.41
NEDD9-216ENST00000620854 SULF2Q8IWU5 870 aa6.22□□□□□ -1.41
NEDD9-216ENST00000620854 BATF2Q8N1L9 274 aa6.22□□□□□ -1.41
NEDD9-216ENST00000620854 CA13Q8N1Q1 262 aa6.22□□□□□ -1.41
NEDD9-216ENST00000620854 GPR137CQ8N3F9 429 aa6.22□□□□□ -1.41
NEDD9-216ENST00000620854 ZNF321PQ8N8H1 164 aa6.22□□□□□ -1.41
NEDD9-216ENST00000620854 ZSCAN4Q8NAM6 433 aaPredicted RBP6.22□□□□□ -1.41
NEDD9-216ENST00000620854 CADM4Q8NFZ8 388 aa6.22□□□□□ -1.41
NEDD9-216ENST00000620854 IL1F10Q8WWZ1 152 aa6.22□□□□□ -1.41
NEDD9-216ENST00000620854 SYT3Q9BQG1 590 aa6.22□□□□□ -1.41
NEDD9-216ENST00000620854 SULT4A1Q9BR01 284 aa6.22□□□□□ -1.41
NEDD9-216ENST00000620854 EMC6Q9BV81 110 aa6.22□□□□□ -1.41
NEDD9-216ENST00000620854 OR11A1Q9GZK7 315 aa6.22□□□□□ -1.41
NEDD9-216ENST00000620854 OR10A5Q9H207 317 aa6.22□□□□□ -1.41
NEDD9-216ENST00000620854 BANF2Q9H503 90 aa6.22□□□□□ -1.41
NEDD9-216ENST00000620854 GSN-AS1Q9NRJ2 163 aa6.22□□□□□ -1.41
NEDD9-216ENST00000620854 OR5AC2Q9NZP5 309 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms