RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 ABCA1O95477 2261 aa4.55□□□□□ -1.68
SHMT1-211ENST00000618902 STAB1Q9NY15 2570 aa4.55□□□□□ -1.68
SHMT1-211ENST00000618902 IGLV1-36A0A0B4J1U3 117 aa4.55□□□□□ -1.68
SHMT1-211ENST00000618902 PRSS37A4D1T9 235 aa4.55□□□□□ -1.68
SHMT1-211ENST00000618902 M0R129 80 aa4.55□□□□□ -1.68
SHMT1-211ENST00000618902 OVOL3O00110 214 aa4.55□□□□□ -1.68
SHMT1-211ENST00000618902 PHYHO14832 338 aa4.55□□□□□ -1.68
SHMT1-211ENST00000618902 DHHO43323 396 aa4.55□□□□□ -1.68
SHMT1-211ENST00000618902 SC5DO75845 299 aa4.55□□□□□ -1.68
SHMT1-211ENST00000618902 MPZL1O95297 269 aa4.55□□□□□ -1.68
SHMT1-211ENST00000618902 IGKV3-15P01624 115 aa4.55□□□□□ -1.68
SHMT1-211ENST00000618902 IGHG1P01857 330 aa4.55□□□□□ -1.68
SHMT1-211ENST00000618902 HLA-HP01893 362 aa4.55□□□□□ -1.68
SHMT1-211ENST00000618902 CRYAAP02489 173 aa4.55□□□□□ -1.68
SHMT1-211ENST00000618902 ERCC1P07992 297 aaPredicted RBP4.55□□□□□ -1.68
SHMT1-211ENST00000618902 SBK2P0C263 348 aa4.55□□□□□ -1.68
SHMT1-211ENST00000618902 FAM157BP0CG42 384 aa4.55□□□□□ -1.68
SHMT1-211ENST00000618902 B4GALT1P15291 398 aa4.55□□□□□ -1.68
SHMT1-211ENST00000618902 MAPK3P27361 379 aaPredicted RBP4.55□□□□□ -1.68
SHMT1-211ENST00000618902 NOS3P29474 1203 aa4.55□□□□□ -1.68
SHMT1-211ENST00000618902 SDHAP31040 664 aa4.55□□□□□ -1.68
SHMT1-211ENST00000618902 RPL4P36578 427 aaKnown RBP4.55□□□□□ -1.68
SHMT1-211ENST00000618902 MNDAP41218 407 aa4.55□□□□□ -1.68
SHMT1-211ENST00000618902 GUCA1AP43080 201 aaPredicted RBP4.55□□□□□ -1.68
SHMT1-211ENST00000618902 TGM4P49221 684 aa4.55□□□□□ -1.68
SHMT1-211ENST00000618902 DAP3P51398 398 aaKnown RBP4.55□□□□□ -1.68
SHMT1-211ENST00000618902 ZNF83P51522 516 aa4.55□□□□□ -1.68
SHMT1-211ENST00000618902 CAPZA1P52907 286 aa4.55□□□□□ -1.68
SHMT1-211ENST00000618902 UBE2NP61088 152 aaKnown RBP4.55□□□□□ -1.68
SHMT1-211ENST00000618902 SSBP1Q04837 148 aaKnown RBP4.55□□□□□ -1.68
SHMT1-211ENST00000618902 MXD1Q05195 221 aa4.55□□□□□ -1.68
SHMT1-211ENST00000618902 SPOCK1Q08629 439 aa4.55□□□□□ -1.68
SHMT1-211ENST00000618902 GGTLC2Q14390 218 aa4.55□□□□□ -1.68
SHMT1-211ENST00000618902 TATDN3Q17R31 274 aa4.55□□□□□ -1.68
SHMT1-211ENST00000618902 KRTAP21-3Q3LHN1 58 aa4.55□□□□□ -1.68
SHMT1-211ENST00000618902 KLHL12Q53G59 568 aa4.55□□□□□ -1.68
SHMT1-211ENST00000618902 C10orf128Q5T292 105 aa4.55□□□□□ -1.68
SHMT1-211ENST00000618902 OR2G6Q5TZ20 316 aa4.55□□□□□ -1.68
SHMT1-211ENST00000618902 GPR139Q6DWJ6 353 aa4.55□□□□□ -1.68
SHMT1-211ENST00000618902 DMKNQ6E0U4 476 aaPredicted RBP4.55□□□□□ -1.68
SHMT1-211ENST00000618902 ALKBH2Q6NS38 261 aa4.55□□□□□ -1.68
SHMT1-211ENST00000618902 CNIH2Q6PI25 160 aa4.55□□□□□ -1.68
SHMT1-211ENST00000618902 LYPD4Q6UWN0 246 aa4.55□□□□□ -1.68
SHMT1-211ENST00000618902 B3GLCTQ6Y288 498 aa4.55□□□□□ -1.68
SHMT1-211ENST00000618902 FOXL2NBQ6ZUU3 175 aa4.55□□□□□ -1.68
SHMT1-211ENST00000618902 VASH1Q7L8A9 365 aaPredicted RBP4.55□□□□□ -1.68
SHMT1-211ENST00000618902 LHFPL3Q86UP9 236 aa4.55□□□□□ -1.68
SHMT1-211ENST00000618902 MDP1Q86V88 176 aa4.55□□□□□ -1.68
SHMT1-211ENST00000618902 SNX29P2Q8IUI4 249 aa4.55□□□□□ -1.68
SHMT1-211ENST00000618902 CPOQ8IVL8 374 aa4.55□□□□□ -1.68
SHMT1-211ENST00000618902 SKA3Q8IX90 412 aa4.55□□□□□ -1.68
SHMT1-211ENST00000618902 CELF2-AS1Q8N7Q2 184 aa4.55□□□□□ -1.68
SHMT1-211ENST00000618902 CYB561A3Q8NBI2 242 aa4.55□□□□□ -1.68
SHMT1-211ENST00000618902 NPEPL1Q8NDH3 523 aa4.55□□□□□ -1.68
SHMT1-211ENST00000618902 OR4K13Q8NH42 304 aa4.55□□□□□ -1.68
SHMT1-211ENST00000618902 OR56B4Q8NH76 319 aa4.55□□□□□ -1.68
SHMT1-211ENST00000618902 LILRB1Q8NHL6 650 aaPredicted RBP4.55□□□□□ -1.68
SHMT1-211ENST00000618902 ABHD4Q8TB40 342 aa4.55□□□□□ -1.68
SHMT1-211ENST00000618902 C17orf50Q8WW18 174 aa4.55□□□□□ -1.68
SHMT1-211ENST00000618902 SPRYD4Q8WW59 207 aaPredicted RBP4.55□□□□□ -1.68
SHMT1-211ENST00000618902 NSMAFQ92636 917 aa4.55□□□□□ -1.68
SHMT1-211ENST00000618902 NRGNQ92686 78 aa4.55□□□□□ -1.68
SHMT1-211ENST00000618902 TMEM203Q969S6 136 aa4.55□□□□□ -1.68
SHMT1-211ENST00000618902 PIK3IP1Q96FE7 263 aa4.55□□□□□ -1.68
SHMT1-211ENST00000618902 PLPPR2Q96GM1 343 aa4.55□□□□□ -1.68
SHMT1-211ENST00000618902 ERMAPQ96PL5 475 aaPredicted RBP4.55□□□□□ -1.68
SHMT1-211ENST00000618902 NMNAT3Q96T66 252 aa4.55□□□□□ -1.68
SHMT1-211ENST00000618902 ALG8Q9BVK2 526 aa4.55□□□□□ -1.68
SHMT1-211ENST00000618902 IFT27Q9BW83 186 aa4.55□□□□□ -1.68
SHMT1-211ENST00000618902 HCAR1Q9BXC0 346 aa4.55□□□□□ -1.68
SHMT1-211ENST00000618902 ULBP2Q9BZM5 246 aa4.55□□□□□ -1.68
SHMT1-211ENST00000618902 NMNAT2Q9BZQ4 307 aa4.55□□□□□ -1.68
SHMT1-211ENST00000618902 MED28Q9H204 178 aa4.55□□□□□ -1.68
SHMT1-211ENST00000618902 SYT4Q9H2B2 425 aa4.55□□□□□ -1.68
SHMT1-211ENST00000618902 LIME1Q9H400 295 aa4.55□□□□□ -1.68
SHMT1-211ENST00000618902 RNF167Q9H6Y7 350 aa4.55□□□□□ -1.68
SHMT1-211ENST00000618902 MED20Q9H944 212 aa4.55□□□□□ -1.68
SHMT1-211ENST00000618902 MARCH7Q9H992 704 aa4.55□□□□□ -1.68
SHMT1-211ENST00000618902 ACOXLQ9NUZ1 547 aa4.55□□□□□ -1.68
SHMT1-211ENST00000618902 TMEM38BQ9NVV0 291 aa4.55□□□□□ -1.68
SHMT1-211ENST00000618902 VSX1Q9NZR4 365 aaPredicted RBP4.55□□□□□ -1.68
SHMT1-211ENST00000618902 SPATA2Q9UM82 520 aa4.55□□□□□ -1.68
SHMT1-211ENST00000618902 SPEF1Q9Y4P9 236 aa4.55□□□□□ -1.68
SHMT1-211ENST00000618902 SONP18583 2426 aaKnown RBP4.55□□□□□ -1.68
SHMT1-211ENST00000618902 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.54□□□□□ -1.68
SHMT1-211ENST00000618902 IGHV1-18A0A0C4DH31 117 aa4.54□□□□□ -1.68
SHMT1-211ENST00000618902 C7orf66A4D0T2 115 aa4.54□□□□□ -1.68
SHMT1-211ENST00000618902 A6NIZ1 184 aa4.54□□□□□ -1.68
SHMT1-211ENST00000618902 C12orf71A8MTZ7 269 aa4.54□□□□□ -1.68
SHMT1-211ENST00000618902 H7C417 338 aa4.54□□□□□ -1.68
SHMT1-211ENST00000618902 NDUFS8O00217 210 aa4.54□□□□□ -1.68
SHMT1-211ENST00000618902 HPGDSO60760 199 aa4.54□□□□□ -1.68
SHMT1-211ENST00000618902 FARS2O95363 451 aaKnown RBP4.54□□□□□ -1.68
SHMT1-211ENST00000618902 IFNA7P01567 189 aa4.54□□□□□ -1.68
SHMT1-211ENST00000618902 IGLV1-44P01699 117 aa4.54□□□□□ -1.68
SHMT1-211ENST00000618902 TFP02787 698 aa4.54□□□□□ -1.68
SHMT1-211ENST00000618902 MMP7P09237 267 aaPredicted RBP4.54□□□□□ -1.68
SHMT1-211ENST00000618902 CALCBP10092 127 aa4.54□□□□□ -1.68
SHMT1-211ENST00000618902 CLUP10909 449 aa4.54□□□□□ -1.68
SHMT1-211ENST00000618902 CD99P14209 185 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms