RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 TMEM123Q8N131 208 aa10.91□□□□□ -0.66
CIITA-212ENST00000618207 GALNT11Q8NCW6 608 aa10.91□□□□□ -0.66
CIITA-212ENST00000618207 GJC3Q8NFK1 279 aa10.91□□□□□ -0.66
CIITA-212ENST00000618207 AKR7LQ8NHP1 331 aa10.91□□□□□ -0.66
CIITA-212ENST00000618207 MICU1Q9BPX6 476 aa10.91□□□□□ -0.66
CIITA-212ENST00000618207 EDEM2Q9BV94 578 aa10.91□□□□□ -0.66
CIITA-212ENST00000618207 ZNF436Q9C0F3 470 aaPredicted RBP10.91□□□□□ -0.66
CIITA-212ENST00000618207 KLK13Q9UKR3 277 aa10.91□□□□□ -0.66
CIITA-212ENST00000618207 RAB27BO00194 218 aa10.91□□□□□ -0.66
CIITA-212ENST00000618207 BET1O15155 118 aa10.91□□□□□ -0.66
CIITA-212ENST00000618207 TNFSF15O95150 251 aa10.91□□□□□ -0.66
CIITA-212ENST00000618207 LPLP06858 475 aa10.91□□□□□ -0.66
CIITA-212ENST00000618207 FKBP2P26885 142 aaKnown RBP10.91□□□□□ -0.66
CIITA-212ENST00000618207 CLDN15P56746 228 aa10.91□□□□□ -0.66
CIITA-212ENST00000618207 RAC3P60763 192 aa10.91□□□□□ -0.66
CIITA-212ENST00000618207 TGIF1Q15583 401 aa10.91□□□□□ -0.66
CIITA-212ENST00000618207 CSRP2Q16527 193 aa10.91□□□□□ -0.66
CIITA-212ENST00000618207 C2orf68Q2NKX9 166 aa10.91□□□□□ -0.66
CIITA-212ENST00000618207 ELFN2Q5R3F8 820 aa10.91□□□□□ -0.66
CIITA-212ENST00000618207 C1orf100Q5SVJ3 147 aa10.91□□□□□ -0.66
CIITA-212ENST00000618207 HES3Q5TGS1 186 aa10.91□□□□□ -0.66
CIITA-212ENST00000618207 ABHD17BQ5VST6 288 aa10.91□□□□□ -0.66
CIITA-212ENST00000618207 GGNQ86UU5 652 aa10.91□□□□□ -0.66
CIITA-212ENST00000618207 FJX1Q86VR8 437 aa10.91□□□□□ -0.66
CIITA-212ENST00000618207 IL22RA1Q8N6P7 574 aa10.91□□□□□ -0.66
CIITA-212ENST00000618207 PIGTQ969N2 578 aa10.91□□□□□ -0.66
CIITA-212ENST00000618207 SLA2Q9H6Q3 261 aa10.91□□□□□ -0.66
CIITA-212ENST00000618207 NARFLQ9H6Q4 476 aa10.91□□□□□ -0.66
CIITA-212ENST00000618207 MRPS28Q9Y2Q9 187 aaKnown RBP10.91□□□□□ -0.66
CIITA-212ENST00000618207 PTPRZ1P23471 2315 aaPredicted RBP10.9□□□□□ -0.66
CIITA-212ENST00000618207 NOS1APO75052 506 aaPredicted RBP10.9□□□□□ -0.66
CIITA-212ENST00000618207 VAMP5O95183 116 aa10.9□□□□□ -0.66
CIITA-212ENST00000618207 GABRA1P14867 456 aa10.9□□□□□ -0.66
CIITA-212ENST00000618207 ARHGDIBP52566 201 aa10.9□□□□□ -0.66
CIITA-212ENST00000618207 AP2S1P53680 142 aaPredicted RBP10.9□□□□□ -0.66
CIITA-212ENST00000618207 ZNF774Q6NX45 483 aa10.9□□□□□ -0.66
CIITA-212ENST00000618207 AAED1Q7RTV5 226 aa10.9□□□□□ -0.66
CIITA-212ENST00000618207 TRAPPC6BQ86SZ2 158 aa10.9□□□□□ -0.66
CIITA-212ENST00000618207 LINC00518Q8N0U6 118 aa10.9□□□□□ -0.66
CIITA-212ENST00000618207 LHFPL5Q8TAF8 219 aa10.9□□□□□ -0.66
CIITA-212ENST00000618207 NABP1Q96AH0 204 aa10.9□□□□□ -0.66
CIITA-212ENST00000618207 LYZL4Q96KX0 146 aa10.9□□□□□ -0.66
CIITA-212ENST00000618207 TAS2R8Q9NYW2 309 aa10.9□□□□□ -0.66
CIITA-212ENST00000618207 FLVCR1Q9Y5Y0 555 aa10.9□□□□□ -0.66
CIITA-212ENST00000618207 GVINP1Q7Z2Y8 2422 aa10.9□□□□□ -0.66
CIITA-212ENST00000618207 MEIKINA0A087WXM9 373 aa10.9□□□□□ -0.66
CIITA-212ENST00000618207 A0A1B0GUH1 482 aa10.9□□□□□ -0.66
CIITA-212ENST00000618207 ZNF736B4DX44 427 aaPredicted RBP10.9□□□□□ -0.66
CIITA-212ENST00000618207 M0R135 149 aa10.9□□□□□ -0.66
CIITA-212ENST00000618207 LDLRAD4O15165 306 aa10.9□□□□□ -0.66
CIITA-212ENST00000618207 ZNF84P51523 738 aa10.9□□□□□ -0.66
CIITA-212ENST00000618207 RAG2P55895 527 aa10.9□□□□□ -0.66
CIITA-212ENST00000618207 ACTBP60709 375 aa10.9□□□□□ -0.66
CIITA-212ENST00000618207 ACTG1P63261 375 aa10.9□□□□□ -0.66
CIITA-212ENST00000618207 C3AR1Q16581 482 aa10.9□□□□□ -0.66
CIITA-212ENST00000618207 RSPO1Q2MKA7 263 aaPredicted RBP10.9□□□□□ -0.66
CIITA-212ENST00000618207 SNAI3Q3KNW1 292 aa10.9□□□□□ -0.66
CIITA-212ENST00000618207 C11orf88Q6PI97 169 aa10.9□□□□□ -0.66
CIITA-212ENST00000618207 C1QL2Q7Z5L3 287 aa10.9□□□□□ -0.66
CIITA-212ENST00000618207 ZNF584Q8IVC4 421 aa10.9□□□□□ -0.66
CIITA-212ENST00000618207 OR5AS1Q8N127 324 aa10.9□□□□□ -0.66
CIITA-212ENST00000618207 TNFAIP8L1Q8WVP5 186 aa10.9□□□□□ -0.66
CIITA-212ENST00000618207 ZNF799Q96GE5 643 aa10.9□□□□□ -0.66
CIITA-212ENST00000618207 NUP50Q9UKX7 468 aa10.9□□□□□ -0.66
CIITA-212ENST00000618207 RHBDD3Q9Y3P4 386 aa10.9□□□□□ -0.66
CIITA-212ENST00000618207 IGKV1-9A0A0C4DH69 117 aa10.9□□□□□ -0.67
CIITA-212ENST00000618207 LOC102725191A0A1B0GVB3 256 aa10.9□□□□□ -0.67
CIITA-212ENST00000618207 LOC390937A0A1W2PQ73 354 aa10.9□□□□□ -0.67
CIITA-212ENST00000618207 SOCS1O15524 211 aa10.9□□□□□ -0.67
CIITA-212ENST00000618207 CRTAPO75718 401 aaPredicted RBP10.9□□□□□ -0.67
CIITA-212ENST00000618207 ATF4P18848 351 aaPredicted RBP10.9□□□□□ -0.67
CIITA-212ENST00000618207 TSPAN5P62079 268 aa10.9□□□□□ -0.67
CIITA-212ENST00000618207 LYPD6Q86Y78 171 aa10.9□□□□□ -0.67
CIITA-212ENST00000618207 FAM109AQ8N4B1 249 aa10.9□□□□□ -0.67
CIITA-212ENST00000618207 FTMTQ8N4E7 242 aa10.9□□□□□ -0.67
CIITA-212ENST00000618207 BPIFB2Q8N4F0 458 aa10.9□□□□□ -0.67
CIITA-212ENST00000618207 FOXRED1Q96CU9 486 aaPredicted RBP10.9□□□□□ -0.67
CIITA-212ENST00000618207 CITED4Q96RK1 184 aa10.9□□□□□ -0.67
CIITA-212ENST00000618207 RANBP3Q9H6Z4 567 aaPredicted RBP10.9□□□□□ -0.67
CIITA-212ENST00000618207 RAB22AQ9UL26 194 aa10.9□□□□□ -0.67
CIITA-212ENST00000618207 GJE1A6NN92 205 aa10.89□□□□□ -0.67
CIITA-212ENST00000618207 STMND1H3BQB6 276 aa10.89□□□□□ -0.67
CIITA-212ENST00000618207 TGM6O95932 706 aa10.89□□□□□ -0.67
CIITA-212ENST00000618207 ITGB2P05107 769 aa10.89□□□□□ -0.67
CIITA-212ENST00000618207 ZNF883P0CG24 379 aa10.89□□□□□ -0.67
CIITA-212ENST00000618207 TAS2R19P59542 299 aa10.89□□□□□ -0.67
CIITA-212ENST00000618207 GRB2P62993 217 aaKnown RBP10.89□□□□□ -0.67
CIITA-212ENST00000618207 CEACAM16Q2WEN9 425 aa10.89□□□□□ -0.67
CIITA-212ENST00000618207 DNM1P46Q6ZS02 220 aa10.89□□□□□ -0.67
CIITA-212ENST00000618207 MUC20Q8N307 709 aaPredicted RBP10.89□□□□□ -0.67
CIITA-212ENST00000618207 GPR137CQ8N3F9 429 aa10.89□□□□□ -0.67
CIITA-212ENST00000618207 TMEM54Q969K7 222 aa10.89□□□□□ -0.67
CIITA-212ENST00000618207 DPCDQ9BVM2 203 aaPredicted RBP10.89□□□□□ -0.67
CIITA-212ENST00000618207 POFUT1Q9H488 388 aa10.89□□□□□ -0.67
CIITA-212ENST00000618207 GPN1Q9HCN4 374 aaPredicted RBP10.89□□□□□ -0.67
CIITA-212ENST00000618207 FOXD3Q9UJU5 478 aaPredicted RBP10.89□□□□□ -0.67
CIITA-212ENST00000618207 PIGLQ9Y2B2 252 aa10.89□□□□□ -0.67
CIITA-212ENST00000618207 CACNA1GO43497 2377 aa10.89□□□□□ -0.67
CIITA-212ENST00000618207 DSPP15924 2871 aaKnown RBP10.89□□□□□ -0.67
CIITA-212ENST00000618207 PRAF2O60831 178 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms