RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 PCGF1Q9BSM1 259 aa7.37□□□□□ -1.23
GPC6-202ENST00000617456 POLR2J2Q9GZM3 115 aaKnown RBP7.37□□□□□ -1.23
GPC6-202ENST00000617456 RAB1BQ9H0U4 201 aa7.37□□□□□ -1.23
GPC6-202ENST00000617456 PCDHAC1Q9H158 963 aa7.37□□□□□ -1.23
GPC6-202ENST00000617456 POLR2J3Q9H1A7 115 aaKnown RBP7.37□□□□□ -1.23
GPC6-202ENST00000617456 ZNF442Q9H7R0 627 aa7.37□□□□□ -1.23
GPC6-202ENST00000617456 ZMAT3Q9HA38 289 aaKnown RBP7.37□□□□□ -1.23
GPC6-202ENST00000617456 LPAR2Q9HBW0 351 aa7.37□□□□□ -1.23
GPC6-202ENST00000617456 SLCO1B3Q9NPD5 702 aa7.37□□□□□ -1.23
GPC6-202ENST00000617456 CA10Q9NS85 328 aa7.37□□□□□ -1.23
GPC6-202ENST00000617456 SLAMF8Q9P0V8 285 aa7.37□□□□□ -1.23
GPC6-202ENST00000617456 B3GAT1Q9P2W7 334 aa7.37□□□□□ -1.23
GPC6-202ENST00000617456 ERVK-18Q9QC07 812 aa7.37□□□□□ -1.23
GPC6-202ENST00000617456 SCP2D1Q9UJQ7 156 aa7.37□□□□□ -1.23
GPC6-202ENST00000617456 ANGPT4Q9Y264 503 aa7.37□□□□□ -1.23
GPC6-202ENST00000617456 KCNIP3Q9Y2W7 256 aa7.37□□□□□ -1.23
GPC6-202ENST00000617456 IGHV1-18A0A0C4DH31 117 aa7.36□□□□□ -1.23
GPC6-202ENST00000617456 hCG_1807616A0A1W2PRN6 198 aa7.36□□□□□ -1.23
GPC6-202ENST00000617456 SLC22A23A1A5C7 686 aa7.36□□□□□ -1.23
GPC6-202ENST00000617456 OR2AT4A6NND4 320 aa7.36□□□□□ -1.23
GPC6-202ENST00000617456 ZNF99A8MXY4 864 aaPredicted RBP7.36□□□□□ -1.23
GPC6-202ENST00000617456 TMEM238C9JI98 176 aa7.36□□□□□ -1.23
GPC6-202ENST00000617456 LYNX1G3V0Z9 82 aa7.36□□□□□ -1.23
GPC6-202ENST00000617456 NR5A2O00482 541 aa7.36□□□□□ -1.23
GPC6-202ENST00000617456 MRPS14O60783 128 aaKnown RBP7.36□□□□□ -1.23
GPC6-202ENST00000617456 PPBPP02775 128 aa7.36□□□□□ -1.23
GPC6-202ENST00000617456 IFNA6P05013 189 aa7.36□□□□□ -1.23
GPC6-202ENST00000617456 ERCC1P07992 297 aaPredicted RBP7.36□□□□□ -1.23
GPC6-202ENST00000617456 TACSTD2P09758 323 aa7.36□□□□□ -1.23
GPC6-202ENST00000617456 ADORA3P0DMS8 318 aa7.36□□□□□ -1.23
GPC6-202ENST00000617456 LYNX1P0DP58 116 aa7.36□□□□□ -1.23
GPC6-202ENST00000617456 IFNGR1P15260 489 aa7.36□□□□□ -1.23
GPC6-202ENST00000617456 FPR3P25089 353 aa7.36□□□□□ -1.23
GPC6-202ENST00000617456 CAPGP40121 348 aa7.36□□□□□ -1.23
GPC6-202ENST00000617456 EVX1P49640 407 aa7.36□□□□□ -1.23
GPC6-202ENST00000617456 SELENOPP49908 381 aa7.36□□□□□ -1.23
GPC6-202ENST00000617456 PPOXP50336 477 aa7.36□□□□□ -1.23
GPC6-202ENST00000617456 IDH3GP51553 393 aaPredicted RBP7.36□□□□□ -1.23
GPC6-202ENST00000617456 RGS8P57771 180 aaPredicted RBP7.36□□□□□ -1.23
GPC6-202ENST00000617456 ACTBP60709 375 aa7.36□□□□□ -1.23
GPC6-202ENST00000617456 ACTA2P62736 377 aa7.36□□□□□ -1.23
GPC6-202ENST00000617456 ACTG2P63267 376 aa7.36□□□□□ -1.23
GPC6-202ENST00000617456 ACTC1P68032 377 aa7.36□□□□□ -1.23
GPC6-202ENST00000617456 ACTA1P68133 377 aa7.36□□□□□ -1.23
GPC6-202ENST00000617456 PRKCDQ05655 676 aa7.36□□□□□ -1.23
GPC6-202ENST00000617456 ZP4Q12836 540 aa7.36□□□□□ -1.23
GPC6-202ENST00000617456 ECH1Q13011 328 aa7.36□□□□□ -1.23
GPC6-202ENST00000617456 C1DQ13901 141 aaKnown RBP7.36□□□□□ -1.23
GPC6-202ENST00000617456 OR1Q1Q15612 314 aa7.36□□□□□ -1.23
GPC6-202ENST00000617456 ADIPOQQ15848 244 aa7.36□□□□□ -1.23
GPC6-202ENST00000617456 RFX4Q33E94 735 aa7.36□□□□□ -1.23
GPC6-202ENST00000617456 NRN1LQ496H8 165 aa7.36□□□□□ -1.23
GPC6-202ENST00000617456 AGKQ53H12 422 aa7.36□□□□□ -1.23
GPC6-202ENST00000617456 LAMTOR1Q6IAA8 161 aa7.36□□□□□ -1.23
GPC6-202ENST00000617456 NIPAL3Q6P499 406 aa7.36□□□□□ -1.23
GPC6-202ENST00000617456 NHLRC1Q6VVB1 395 aa7.36□□□□□ -1.23
GPC6-202ENST00000617456 ZNF813Q6ZN06 617 aa7.36□□□□□ -1.23
GPC6-202ENST00000617456 SLC16A14Q7RTX9 510 aa7.36□□□□□ -1.23
GPC6-202ENST00000617456 HSD17B13Q7Z5P4 300 aaPredicted RBP7.36□□□□□ -1.23
GPC6-202ENST00000617456 LHFPL4Q7Z7J7 247 aa7.36□□□□□ -1.23
GPC6-202ENST00000617456 MRPL52Q86TS9 123 aaKnown RBP7.36□□□□□ -1.23
GPC6-202ENST00000617456 THNSL2Q86YJ6 484 aa7.36□□□□□ -1.23
GPC6-202ENST00000617456 CDK20Q8IZL9 346 aa7.36□□□□□ -1.23
GPC6-202ENST00000617456 TMEM123Q8N131 208 aa7.36□□□□□ -1.23
GPC6-202ENST00000617456 GPR137CQ8N3F9 429 aa7.36□□□□□ -1.23
GPC6-202ENST00000617456 STPG2Q8N412 459 aa7.36□□□□□ -1.23
GPC6-202ENST00000617456 C9orf62Q8N4C0 152 aa7.36□□□□□ -1.23
GPC6-202ENST00000617456 FAM156AQ8NDB6 213 aa7.36□□□□□ -1.23
GPC6-202ENST00000617456 PAPD5Q8NDF8 572 aaKnown RBP7.36□□□□□ -1.23
GPC6-202ENST00000617456 OR52M1Q8NGK5 317 aa7.36□□□□□ -1.23
GPC6-202ENST00000617456 OR13C2Q8NGS9 318 aa7.36□□□□□ -1.23
GPC6-202ENST00000617456 NFKBIDQ8NI38 313 aa7.36□□□□□ -1.23
GPC6-202ENST00000617456 ZNF418Q8TF45 676 aaPredicted RBP7.36□□□□□ -1.23
GPC6-202ENST00000617456 GLYATL2Q8WU03 294 aa7.36□□□□□ -1.23
GPC6-202ENST00000617456 ZNF2Q9BSG1 426 aaPredicted RBP7.36□□□□□ -1.23
GPC6-202ENST00000617456 CCDC32Q9BV29 185 aa7.36□□□□□ -1.23
GPC6-202ENST00000617456 ASPNQ9BXN1 380 aa7.36□□□□□ -1.23
GPC6-202ENST00000617456 SEMA6AQ9H2E6 1030 aa7.36□□□□□ -1.23
GPC6-202ENST00000617456 PLK3Q9H4B4 646 aa7.36□□□□□ -1.23
GPC6-202ENST00000617456 ZNF385DQ9H6B1 395 aa7.36□□□□□ -1.23
GPC6-202ENST00000617456 B3GAT2Q9NPZ5 323 aa7.36□□□□□ -1.23
GPC6-202ENST00000617456 METTL1Q9UBP6 276 aaKnown RBP7.36□□□□□ -1.23
GPC6-202ENST00000617456 GOLT1BQ9Y3E0 138 aa7.36□□□□□ -1.23
GPC6-202ENST00000617456 PKD1L1Q8TDX9 2849 aa7.35□□□□□ -1.23
GPC6-202ENST00000617456 IGKV1D-42A0A075B6H8 117 aa7.35□□□□□ -1.23
GPC6-202ENST00000617456 TRBV23-1A0A0A0MS06 115 aa7.35□□□□□ -1.23
GPC6-202ENST00000617456 TMEM89A2RUT3 159 aa7.35□□□□□ -1.23
GPC6-202ENST00000617456 C5orf52A6NGY3 159 aa7.35□□□□□ -1.23
GPC6-202ENST00000617456 A6NIZ1 184 aa7.35□□□□□ -1.23
GPC6-202ENST00000617456 TRDCB7Z8K6 153 aa7.35□□□□□ -1.23
GPC6-202ENST00000617456 MS4A18H0YCH9 400 aa7.35□□□□□ -1.23
GPC6-202ENST00000617456 M0R082 166 aa7.35□□□□□ -1.23
GPC6-202ENST00000617456 TRAF3IP2O43734 574 aaPredicted RBP7.35□□□□□ -1.23
GPC6-202ENST00000617456 UPK3AO75631 287 aa7.35□□□□□ -1.23
GPC6-202ENST00000617456 SPDEFO95238 335 aa7.35□□□□□ -1.23
GPC6-202ENST00000617456 FCGR1AP12314 374 aa7.35□□□□□ -1.23
GPC6-202ENST00000617456 PCMT1P22061 227 aa7.35□□□□□ -1.23
GPC6-202ENST00000617456 HTR2AP28223 471 aa7.35□□□□□ -1.23
GPC6-202ENST00000617456 GRPRP30550 384 aa7.35□□□□□ -1.23
GPC6-202ENST00000617456 ALDH3B1P43353 468 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms