RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 C9J4A7 227 aa12.38□□□□□ -0.43
PCDHGA3-202ENST00000612467 NPIPA2E9PIF3 369 aa12.38□□□□□ -0.43
PCDHGA3-202ENST00000612467 NPIPA3F8WFD2 350 aa12.38□□□□□ -0.43
PCDHGA3-202ENST00000612467 CDC14BO60729 498 aa12.38□□□□□ -0.43
PCDHGA3-202ENST00000612467 STK17BO94768 372 aa12.38□□□□□ -0.43
PCDHGA3-202ENST00000612467 BPNT1O95861 308 aa12.38□□□□□ -0.43
PCDHGA3-202ENST00000612467 PDGFAP04085 211 aa12.38□□□□□ -0.43
PCDHGA3-202ENST00000612467 RAB6AP20340 208 aa12.38□□□□□ -0.43
PCDHGA3-202ENST00000612467 CD34P28906 385 aa12.38□□□□□ -0.43
PCDHGA3-202ENST00000612467 ZFP36L1Q07352 338 aaKnown RBP12.38□□□□□ -0.43
PCDHGA3-202ENST00000612467 SNAI3Q3KNW1 292 aa12.38□□□□□ -0.43
PCDHGA3-202ENST00000612467 FAM74A1Q5RGS3 127 aa12.38□□□□□ -0.43
PCDHGA3-202ENST00000612467 OPN5Q6U736 354 aa12.38□□□□□ -0.43
PCDHGA3-202ENST00000612467 ZIC4Q8N9L1 334 aa12.38□□□□□ -0.43
PCDHGA3-202ENST00000612467 NABP1Q96AH0 204 aa12.38□□□□□ -0.43
PCDHGA3-202ENST00000612467 FOXRED1Q96CU9 486 aaPredicted RBP12.38□□□□□ -0.43
PCDHGA3-202ENST00000612467 FBXO17Q96EF6 278 aa12.38□□□□□ -0.43
PCDHGA3-202ENST00000612467 RADILQ96JH8 1075 aa12.38□□□□□ -0.43
PCDHGA3-202ENST00000612467 DOCK7Q96N67 2140 aa12.38□□□□□ -0.43
PCDHGA3-202ENST00000612467 ZNF700Q9H0M5 742 aa12.38□□□□□ -0.43
PCDHGA3-202ENST00000612467 WDR13Q9H1Z4 485 aa12.38□□□□□ -0.43
PCDHGA3-202ENST00000612467 RDH8Q9NYR8 311 aa12.38□□□□□ -0.43
PCDHGA3-202ENST00000612467 SPEF1Q9Y4P9 236 aa12.38□□□□□ -0.43
PCDHGA3-202ENST00000612467 H3BUI4 141 aa12.38□□□□□ -0.43
PCDHGA3-202ENST00000612467 SIGLEC5O15389 551 aa12.38□□□□□ -0.43
PCDHGA3-202ENST00000612467 PMS2P2O95744 297 aa12.38□□□□□ -0.43
PCDHGA3-202ENST00000612467 EIF1P41567 113 aaKnown RBP12.38□□□□□ -0.43
PCDHGA3-202ENST00000612467 SIGLEC14Q08ET2 396 aa12.38□□□□□ -0.43
PCDHGA3-202ENST00000612467 UBE2V2Q15819 145 aa12.38□□□□□ -0.43
PCDHGA3-202ENST00000612467 CCDC28AQ8IWP9 274 aa12.38□□□□□ -0.43
PCDHGA3-202ENST00000612467 OR9K2Q8NGE7 335 aa12.38□□□□□ -0.43
PCDHGA3-202ENST00000612467 OR2Y1Q8NGV0 311 aa12.38□□□□□ -0.43
PCDHGA3-202ENST00000612467 OR14K1Q8NGZ2 314 aa12.38□□□□□ -0.43
PCDHGA3-202ENST00000612467 ZBTB8AQ96BR9 441 aa12.38□□□□□ -0.43
PCDHGA3-202ENST00000612467 ANGPTL4Q9BY76 406 aa12.38□□□□□ -0.43
PCDHGA3-202ENST00000612467 MFFQ9GZY8 342 aa12.38□□□□□ -0.43
PCDHGA3-202ENST00000612467 SPENQ96T58 3664 aaKnown RBP12.37□□□□□ -0.43
PCDHGA3-202ENST00000612467 STMND1H3BQB6 276 aa12.37□□□□□ -0.43
PCDHGA3-202ENST00000612467 LGALS8O00214 317 aa12.37□□□□□ -0.43
PCDHGA3-202ENST00000612467 SDCBPO00560 298 aaPredicted RBP12.37□□□□□ -0.43
PCDHGA3-202ENST00000612467 RLN2P04090 185 aa12.37□□□□□ -0.43
PCDHGA3-202ENST00000612467 ERCC1P07992 297 aaPredicted RBP12.37□□□□□ -0.43
PCDHGA3-202ENST00000612467 RAB14P61106 215 aa12.37□□□□□ -0.43
PCDHGA3-202ENST00000612467 MICBQ29980 383 aa12.37□□□□□ -0.43
PCDHGA3-202ENST00000612467 WDR5BQ86VZ2 330 aa12.37□□□□□ -0.43
PCDHGA3-202ENST00000612467 BEST3Q8N1M1 668 aa12.37□□□□□ -0.43
PCDHGA3-202ENST00000612467 ADPRHL1Q8NDY3 354 aa12.37□□□□□ -0.43
PCDHGA3-202ENST00000612467 SLC25A43Q8WUT9 341 aaPredicted RBP12.37□□□□□ -0.43
PCDHGA3-202ENST00000612467 WBP1Q96G27 269 aa12.37□□□□□ -0.43
PCDHGA3-202ENST00000612467 ALKBH3Q96Q83 286 aaPredicted RBP12.37□□□□□ -0.43
PCDHGA3-202ENST00000612467 PDCD10Q9BUL8 212 aa12.37□□□□□ -0.43
PCDHGA3-202ENST00000612467 EDEM2Q9BV94 578 aa12.37□□□□□ -0.43
PCDHGA3-202ENST00000612467 ELL3Q9HB65 397 aaPredicted RBP12.37□□□□□ -0.43
PCDHGA3-202ENST00000612467 AUP1Q9Y679 476 aa12.37□□□□□ -0.43
PCDHGA3-202ENST00000612467 IGHV3-9P01782 118 aa12.37□□□□□ -0.43
PCDHGA3-202ENST00000612467 SERPINA2P20848 420 aa12.37□□□□□ -0.43
PCDHGA3-202ENST00000612467 MSR1P21757 451 aa12.37□□□□□ -0.43
PCDHGA3-202ENST00000612467 CASRP41180 1078 aa12.37□□□□□ -0.43
PCDHGA3-202ENST00000612467 NPY4RP50391 375 aa12.37□□□□□ -0.43
PCDHGA3-202ENST00000612467 CAPZA1P52907 286 aa12.37□□□□□ -0.43
PCDHGA3-202ENST00000612467 ATP1B3P54709 279 aa12.37□□□□□ -0.43
PCDHGA3-202ENST00000612467 HGFACQ04756 655 aa12.37□□□□□ -0.43
PCDHGA3-202ENST00000612467 TIPARPQ7Z3E1 657 aaKnown RBP12.37□□□□□ -0.43
PCDHGA3-202ENST00000612467 PAQR8Q8TEZ7 354 aa12.37□□□□□ -0.43
PCDHGA3-202ENST00000612467 RAB3CQ96E17 227 aa12.37□□□□□ -0.43
PCDHGA3-202ENST00000612467 SLC25A21Q9BQT8 299 aaPredicted RBP12.37□□□□□ -0.43
PCDHGA3-202ENST00000612467 UQCC2Q9BRT2 126 aa12.37□□□□□ -0.43
PCDHGA3-202ENST00000612467 PLEK2Q9NYT0 353 aa12.37□□□□□ -0.43
PCDHGA3-202ENST00000612467 UPB1Q9UBR1 384 aa12.37□□□□□ -0.43
PCDHGA3-202ENST00000612467 ZNF407Q9C0G0 2248 aa12.36□□□□□ -0.43
PCDHGA3-202ENST00000612467 ZFHX4Q86UP3 3567 aa12.36□□□□□ -0.43
PCDHGA3-202ENST00000612467 DISC1C4P0D8 188 aa12.36□□□□□ -0.43
PCDHGA3-202ENST00000612467 EEF1E1-BLOC1S5C9J1V9 151 aa12.36□□□□□ -0.43
PCDHGA3-202ENST00000612467 RP2O75695 350 aa12.36□□□□□ -0.43
PCDHGA3-202ENST00000612467 ZNF205O95201 554 aa12.36□□□□□ -0.43
PCDHGA3-202ENST00000612467 HTR3BO95264 441 aa12.36□□□□□ -0.43
PCDHGA3-202ENST00000612467 NMBP08949 121 aa12.36□□□□□ -0.43
PCDHGA3-202ENST00000612467 RRASP10301 218 aa12.36□□□□□ -0.43
PCDHGA3-202ENST00000612467 FOLR3P41439 243 aa12.36□□□□□ -0.43
PCDHGA3-202ENST00000612467 SSBP1Q04837 148 aaKnown RBP12.36□□□□□ -0.43
PCDHGA3-202ENST00000612467 UBALD2Q8IYN6 164 aa12.36□□□□□ -0.43
PCDHGA3-202ENST00000612467 TMEM123Q8N131 208 aa12.36□□□□□ -0.43
PCDHGA3-202ENST00000612467 BATF2Q8N1L9 274 aa12.36□□□□□ -0.43
PCDHGA3-202ENST00000612467 OR4K15Q8NH41 348 aa12.36□□□□□ -0.43
PCDHGA3-202ENST00000612467 ST6GALNAC5Q9BVH7 336 aa12.36□□□□□ -0.43
PCDHGA3-202ENST00000612467 TMEM59Q9BXS4 323 aa12.36□□□□□ -0.43
PCDHGA3-202ENST00000612467 TMPRSS13Q9BYE2 586 aa12.36□□□□□ -0.43
PCDHGA3-202ENST00000612467 DNAJC13O75165 2243 aa12.36□□□□□ -0.43
PCDHGA3-202ENST00000612467 PINLYPA6NC86 204 aa12.36□□□□□ -0.43
PCDHGA3-202ENST00000612467 TRAPPC6AO75865 159 aa12.36□□□□□ -0.43
PCDHGA3-202ENST00000612467 ZBTB25P24278 435 aa12.36□□□□□ -0.43
PCDHGA3-202ENST00000612467 ADH6P28332 368 aa12.36□□□□□ -0.43
PCDHGA3-202ENST00000612467 SUCLG1P53597 346 aaKnown RBP12.36□□□□□ -0.43
PCDHGA3-202ENST00000612467 DSCR4P56555 118 aaPredicted RBP12.36□□□□□ -0.43
PCDHGA3-202ENST00000612467 MLF1P58340 268 aa12.36□□□□□ -0.43
PCDHGA3-202ENST00000612467 MC2RQ01718 297 aa12.36□□□□□ -0.43
PCDHGA3-202ENST00000612467 WIPI1Q5MNZ9 446 aaPredicted RBP12.36□□□□□ -0.43
PCDHGA3-202ENST00000612467 GSG1LQ6UXU4 331 aa12.36□□□□□ -0.43
PCDHGA3-202ENST00000612467 CCDC107Q8WV48 283 aa12.36□□□□□ -0.43
PCDHGA3-202ENST00000612467 PTX4Q96A99 478 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms