RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 ENPP1P22413 925 aa7.73□□□□□ -1.17
LIG4-204ENST00000611712 OPRM1P35372 400 aa7.73□□□□□ -1.17
LIG4-204ENST00000611712 MMP16P51512 607 aa7.73□□□□□ -1.17
LIG4-204ENST00000611712 EFNA3P52797 238 aa7.73□□□□□ -1.17
LIG4-204ENST00000611712 OGFOD3Q6PK18 319 aa7.73□□□□□ -1.17
LIG4-204ENST00000611712 SEZ6L2Q6UXD5 910 aa7.73□□□□□ -1.17
LIG4-204ENST00000611712 ZNF100Q8IYN0 542 aa7.73□□□□□ -1.17
LIG4-204ENST00000611712 ARHGEF39Q8N4T4 335 aa7.73□□□□□ -1.17
LIG4-204ENST00000611712 GNRHR2Q96P88 292 aa7.73□□□□□ -1.17
LIG4-204ENST00000611712 ZNF2Q9BSG1 426 aaPredicted RBP7.73□□□□□ -1.17
LIG4-204ENST00000611712 ZNF416Q9BWM5 594 aa7.73□□□□□ -1.17
LIG4-204ENST00000611712 STRADBQ9C0K7 418 aa7.73□□□□□ -1.17
LIG4-204ENST00000611712 ZFP57Q9NU63 452 aa7.73□□□□□ -1.17
LIG4-204ENST00000611712 FAM86C1Q9NVL1 165 aa7.73□□□□□ -1.17
LIG4-204ENST00000611712 SLC33A1O00400 549 aaPredicted RBP7.73□□□□□ -1.17
LIG4-204ENST00000611712 DHHO43323 396 aa7.73□□□□□ -1.17
LIG4-204ENST00000611712 IGKV3-11P04433 115 aa7.73□□□□□ -1.17
LIG4-204ENST00000611712 CD79AP11912 226 aa7.73□□□□□ -1.17
LIG4-204ENST00000611712 OR3A4PP47883 348 aa7.73□□□□□ -1.17
LIG4-204ENST00000611712 EXT1Q16394 746 aa7.73□□□□□ -1.17
LIG4-204ENST00000611712 PHLDA2Q53GA4 152 aa7.73□□□□□ -1.17
LIG4-204ENST00000611712 TMPPEQ6ZT21 453 aa7.73□□□□□ -1.17
LIG4-204ENST00000611712 MRPL21Q7Z2W9 205 aaKnown RBP7.73□□□□□ -1.17
LIG4-204ENST00000611712 SLC38A6Q8IZM9 456 aa7.73□□□□□ -1.17
LIG4-204ENST00000611712 BATF2Q8N1L9 274 aa7.73□□□□□ -1.17
LIG4-204ENST00000611712 ARRDC1Q8N5I2 433 aa7.73□□□□□ -1.17
LIG4-204ENST00000611712 RNF133Q8WVZ7 376 aa7.73□□□□□ -1.17
LIG4-204ENST00000611712 LIPHQ8WWY8 451 aa7.73□□□□□ -1.17
LIG4-204ENST00000611712 ADAT3Q96EY9 351 aaPredicted RBP7.73□□□□□ -1.17
LIG4-204ENST00000611712 ZNF75AQ96N20 296 aa7.73□□□□□ -1.17
LIG4-204ENST00000611712 TMPRSS13Q9BYE2 586 aa7.73□□□□□ -1.17
LIG4-204ENST00000611712 ZNF286AQ9HBT8 521 aa7.73□□□□□ -1.17
LIG4-204ENST00000611712 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.73□□□□□ -1.17
LIG4-204ENST00000611712 NPDC1Q9NQX5 325 aaPredicted RBP7.73□□□□□ -1.17
LIG4-204ENST00000611712 ZNF230Q9UIE0 474 aaPredicted RBP7.73□□□□□ -1.17
LIG4-204ENST00000611712 H3BUI4 141 aa7.73□□□□□ -1.17
LIG4-204ENST00000611712 MBTPS2O43462 519 aa7.73□□□□□ -1.17
LIG4-204ENST00000611712 LMX1BO60663 402 aa7.73□□□□□ -1.17
LIG4-204ENST00000611712 ZNF354AO60765 605 aaPredicted RBP7.73□□□□□ -1.17
LIG4-204ENST00000611712 ABHD16AO95870 558 aa7.73□□□□□ -1.17
LIG4-204ENST00000611712 IFNA2P01563 188 aa7.73□□□□□ -1.17
LIG4-204ENST00000611712 IGHV3-9P01782 118 aa7.73□□□□□ -1.17
LIG4-204ENST00000611712 ZNF728P0DKX0 622 aa7.73□□□□□ -1.17
LIG4-204ENST00000611712 HIST1H1DP16402 221 aaKnown RBP7.73□□□□□ -1.17
LIG4-204ENST00000611712 CNR1P21554 472 aa7.73□□□□□ -1.17
LIG4-204ENST00000611712 H2BFSP57053 126 aa7.73□□□□□ -1.17
LIG4-204ENST00000611712 PCBD1P61457 104 aa7.73□□□□□ -1.17
LIG4-204ENST00000611712 MOGAT2Q3SYC2 334 aa7.73□□□□□ -1.17
LIG4-204ENST00000611712 ABHD17BQ5VST6 288 aa7.73□□□□□ -1.17
LIG4-204ENST00000611712 H3F3CQ6NXT2 135 aa7.73□□□□□ -1.17
LIG4-204ENST00000611712 ZNF695Q8IW36 515 aa7.73□□□□□ -1.17
LIG4-204ENST00000611712 NUBPLQ8TB37 319 aa7.73□□□□□ -1.17
LIG4-204ENST00000611712 TMEM231Q9H6L2 316 aa7.73□□□□□ -1.17
LIG4-204ENST00000611712 MED12Q93074 2177 aa7.72□□□□□ -1.17
LIG4-204ENST00000611712 B3GALNT1O75752 331 aa7.72□□□□□ -1.17
LIG4-204ENST00000611712 VSIG8P0DPA2 414 aa7.72□□□□□ -1.17
LIG4-204ENST00000611712 KISS1Q15726 138 aa7.72□□□□□ -1.17
LIG4-204ENST00000611712 OR2W3Q7Z3T1 314 aa7.72□□□□□ -1.17
LIG4-204ENST00000611712 LRRC75AQ8NAA5 344 aa7.72□□□□□ -1.17
LIG4-204ENST00000611712 OR5M9Q8NGP3 310 aa7.72□□□□□ -1.17
LIG4-204ENST00000611712 OR6K3Q8NGY3 331 aa7.72□□□□□ -1.17
LIG4-204ENST00000611712 EMG1Q92979 244 aaKnown RBP7.72□□□□□ -1.17
LIG4-204ENST00000611712 PAPOLGQ9BWT3 736 aaKnown RBP7.72□□□□□ -1.17
LIG4-204ENST00000611712 NKX6-2Q9C056 277 aaPredicted RBP7.72□□□□□ -1.17
LIG4-204ENST00000611712 FAM221AA4D161 298 aa7.72□□□□□ -1.17
LIG4-204ENST00000611712 SHOXO15266 292 aa7.72□□□□□ -1.17
LIG4-204ENST00000611712 MRPL33O75394 65 aaKnown RBP7.72□□□□□ -1.17
LIG4-204ENST00000611712 PRKACAP17612 351 aa7.72□□□□□ -1.17
LIG4-204ENST00000611712 PPT1P50897 306 aa7.72□□□□□ -1.17
LIG4-204ENST00000611712 KRBOX4Q5JUW0 171 aa7.72□□□□□ -1.17
LIG4-204ENST00000611712 FBXW12Q6X9E4 464 aa7.72□□□□□ -1.17
LIG4-204ENST00000611712 ZNF813Q6ZN06 617 aa7.72□□□□□ -1.17
LIG4-204ENST00000611712 OR8B12Q8NGG6 310 aa7.72□□□□□ -1.17
LIG4-204ENST00000611712 IFI44Q8TCB0 444 aa7.72□□□□□ -1.17
LIG4-204ENST00000611712 PARP12Q9H0J9 701 aaKnown RBP7.72□□□□□ -1.17
LIG4-204ENST00000611712 ALX4Q9H161 411 aaPredicted RBP7.72□□□□□ -1.17
LIG4-204ENST00000611712 RPS10P5Q9NQ39 176 aa7.72□□□□□ -1.17
LIG4-204ENST00000611712 KIF26BQ2KJY2 2108 aa7.72□□□□□ -1.17
LIG4-204ENST00000611712 TO15178 435 aa7.72□□□□□ -1.17
LIG4-204ENST00000611712 SOCS1O15524 211 aa7.72□□□□□ -1.17
LIG4-204ENST00000611712 ANGPTL7O43827 346 aa7.72□□□□□ -1.17
LIG4-204ENST00000611712 TTRP02766 147 aa7.72□□□□□ -1.17
LIG4-204ENST00000611712 NMBP08949 121 aa7.72□□□□□ -1.17
LIG4-204ENST00000611712 ZNF133P52736 654 aaPredicted RBP7.72□□□□□ -1.17
LIG4-204ENST00000611712 ECH1Q13011 328 aa7.72□□□□□ -1.17
LIG4-204ENST00000611712 FZD5Q13467 585 aa7.72□□□□□ -1.17
LIG4-204ENST00000611712 SHBQ15464 509 aa7.72□□□□□ -1.17
LIG4-204ENST00000611712 TUSC1Q2TAM9 212 aa7.72□□□□□ -1.17
LIG4-204ENST00000611712 KCNRGQ8N5I3 272 aa7.72□□□□□ -1.17
LIG4-204ENST00000611712 SLC38A9Q8NBW4 561 aa7.72□□□□□ -1.17
LIG4-204ENST00000611712 ZNF519Q8TB69 540 aa7.72□□□□□ -1.17
LIG4-204ENST00000611712 RHBDD1Q8TEB9 315 aa7.72□□□□□ -1.17
LIG4-204ENST00000611712 ZNF501Q96CX3 271 aaPredicted RBP7.72□□□□□ -1.17
LIG4-204ENST00000611712 GFI1Q99684 422 aa7.72□□□□□ -1.17
LIG4-204ENST00000611712 DNTTIP1Q9H147 329 aa7.72□□□□□ -1.17
LIG4-204ENST00000611712 OR51B6Q9H340 312 aa7.72□□□□□ -1.17
LIG4-204ENST00000611712 ZNF629Q9UEG4 869 aaPredicted RBP7.72□□□□□ -1.17
LIG4-204ENST00000611712 KLK13Q9UKR3 277 aa7.72□□□□□ -1.17
LIG4-204ENST00000611712 CCDC163A0A0D9SF12 145 aa7.71□□□□□ -1.17
LIG4-204ENST00000611712 BET1O15155 118 aa7.71□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms