RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 AHSA1O95433 338 aa11.22□□□□□ -0.61
CTCFL-218ENST00000608440 IFNA6P05013 189 aa11.22□□□□□ -0.61
CTCFL-218ENST00000608440 MMP16P51512 607 aa11.22□□□□□ -0.61
CTCFL-218ENST00000608440 PDE4DIPQ5VU43 2346 aa11.22□□□□□ -0.61
CTCFL-218ENST00000608440 Q6ZVU0 165 aa11.22□□□□□ -0.61
CTCFL-218ENST00000608440 DCXRQ7Z4W1 244 aa11.22□□□□□ -0.61
CTCFL-218ENST00000608440 CACUL1Q86Y37 369 aa11.22□□□□□ -0.61
CTCFL-218ENST00000608440 CYB561D1Q8N8Q1 229 aa11.22□□□□□ -0.61
CTCFL-218ENST00000608440 ZDHHC22Q8N966 263 aa11.22□□□□□ -0.61
CTCFL-218ENST00000608440 TVP23CQ96ET8 276 aa11.22□□□□□ -0.61
CTCFL-218ENST00000608440 RCC1LQ96I51 464 aaKnown RBP11.22□□□□□ -0.61
CTCFL-218ENST00000608440 NIPSNAP3BQ9BS92 247 aa11.22□□□□□ -0.61
CTCFL-218ENST00000608440 EFCAB11Q9BUY7 163 aa11.22□□□□□ -0.61
CTCFL-218ENST00000608440 A0A1W2PS29 197 aa11.21□□□□□ -0.61
CTCFL-218ENST00000608440 FTCDNL1E5RQL4 147 aa11.21□□□□□ -0.61
CTCFL-218ENST00000608440 HCRTR2O43614 444 aa11.21□□□□□ -0.61
CTCFL-218ENST00000608440 TMPRSS11DO60235 418 aa11.21□□□□□ -0.61
CTCFL-218ENST00000608440 ZIC2O95409 532 aaPredicted RBP11.21□□□□□ -0.61
CTCFL-218ENST00000608440 CD1AP06126 327 aa11.21□□□□□ -0.61
CTCFL-218ENST00000608440 LYL1P12980 280 aa11.21□□□□□ -0.61
CTCFL-218ENST00000608440 HOXC12P31275 282 aa11.21□□□□□ -0.61
CTCFL-218ENST00000608440 SELENOTP62341 195 aa11.21□□□□□ -0.61
CTCFL-218ENST00000608440 PMPCAQ10713 525 aa11.21□□□□□ -0.61
CTCFL-218ENST00000608440 GAS6Q14393 721 aa11.21□□□□□ -0.61
CTCFL-218ENST00000608440 COL5A1-AS1Q5SY13 56 aa11.21□□□□□ -0.61
CTCFL-218ENST00000608440 Q6ZVH6 145 aa11.21□□□□□ -0.61
CTCFL-218ENST00000608440 CMBLQ96DG6 245 aa11.21□□□□□ -0.61
CTCFL-218ENST00000608440 PRSS16Q9NQE7 514 aa11.21□□□□□ -0.61
CTCFL-218ENST00000608440 B3GAT1Q9P2W7 334 aa11.21□□□□□ -0.61
CTCFL-218ENST00000608440 RNF150Q9ULK6 438 aa11.21□□□□□ -0.61
CTCFL-218ENST00000608440 RANBP2P49792 3224 aaKnown RBP11.21□□□□□ -0.61
CTCFL-218ENST00000608440 CENPVL1A0A0U1RR11 272 aa11.21□□□□□ -0.62
CTCFL-218ENST00000608440 RBFOX3A6NFN3 312 aa11.21□□□□□ -0.62
CTCFL-218ENST00000608440 ZNF860A6NHJ4 632 aa11.21□□□□□ -0.62
CTCFL-218ENST00000608440 TMEM127O75204 238 aa11.21□□□□□ -0.62
CTCFL-218ENST00000608440 JMJD7P0C870 316 aa11.21□□□□□ -0.62
CTCFL-218ENST00000608440 PET100P0DJ07 73 aa11.21□□□□□ -0.62
CTCFL-218ENST00000608440 TUBG1P23258 451 aa11.21□□□□□ -0.62
CTCFL-218ENST00000608440 CTHP32929 405 aa11.21□□□□□ -0.62
CTCFL-218ENST00000608440 ATP6V1FQ16864 119 aa11.21□□□□□ -0.62
CTCFL-218ENST00000608440 TDRG1Q3Y452 100 aa11.21□□□□□ -0.62
CTCFL-218ENST00000608440 CLEC18BQ6UXF7 455 aa11.21□□□□□ -0.62
CTCFL-218ENST00000608440 TMEM182Q6ZP80 229 aaPredicted RBP11.21□□□□□ -0.62
CTCFL-218ENST00000608440 MDGA2Q7Z553 956 aa11.21□□□□□ -0.62
CTCFL-218ENST00000608440 TRAPPC6BQ86SZ2 158 aa11.21□□□□□ -0.62
CTCFL-218ENST00000608440 ZPLD1Q8TCW7 415 aa11.21□□□□□ -0.62
CTCFL-218ENST00000608440 RNF166Q96A37 237 aaPredicted RBP11.21□□□□□ -0.62
CTCFL-218ENST00000608440 COL26A1Q96A83 441 aa11.21□□□□□ -0.62
CTCFL-218ENST00000608440 SDSLQ96GA7 329 aa11.21□□□□□ -0.62
CTCFL-218ENST00000608440 CLUHP3Q96NS8 147 aa11.21□□□□□ -0.62
CTCFL-218ENST00000608440 OR7D2Q96RA2 312 aa11.21□□□□□ -0.62
CTCFL-218ENST00000608440 TBX15Q96SF7 602 aa11.21□□□□□ -0.62
CTCFL-218ENST00000608440 FAM83CQ9BQN1 747 aa11.21□□□□□ -0.62
CTCFL-218ENST00000608440 MRPS2Q9Y399 296 aaKnown RBP11.21□□□□□ -0.62
CTCFL-218ENST00000608440 LIPGQ9Y5X9 500 aa11.21□□□□□ -0.62
CTCFL-218ENST00000608440 XIRP2A4UGR9 3374 aa11.2□□□□□ -0.62
CTCFL-218ENST00000608440 CD33P20138 364 aa11.2□□□□□ -0.62
CTCFL-218ENST00000608440 ANKRD55Q3KP44 614 aa11.2□□□□□ -0.62
CTCFL-218ENST00000608440 OR51A2Q8NGJ7 313 aa11.2□□□□□ -0.62
CTCFL-218ENST00000608440 GRHL3Q8TE85 626 aa11.2□□□□□ -0.62
CTCFL-218ENST00000608440 TSEN15Q8WW01 171 aaKnown RBP11.2□□□□□ -0.62
CTCFL-218ENST00000608440 TMEM18Q96B42 140 aa11.2□□□□□ -0.62
CTCFL-218ENST00000608440 NMNAT3Q96T66 252 aa11.2□□□□□ -0.62
CTCFL-218ENST00000608440 KXD1Q9BQD3 176 aa11.2□□□□□ -0.62
CTCFL-218ENST00000608440 SLC26A1Q9H2B4 701 aa11.2□□□□□ -0.62
CTCFL-218ENST00000608440 MSL2Q9HCI7 577 aa11.2□□□□□ -0.62
CTCFL-218ENST00000608440 DKKL1Q9UK85 242 aa11.2□□□□□ -0.62
CTCFL-218ENST00000608440 IKZF2Q9UKS7 526 aa11.2□□□□□ -0.62
CTCFL-218ENST00000608440 LSM5Q9Y4Y9 91 aaKnown RBP11.2□□□□□ -0.62
CTCFL-218ENST00000608440 RFNGQ9Y644 331 aa11.2□□□□□ -0.62
CTCFL-218ENST00000608440 LOC102724200A0A096LPH7 203 aaPredicted RBP11.2□□□□□ -0.62
CTCFL-218ENST00000608440 GJB5O95377 273 aa11.2□□□□□ -0.62
CTCFL-218ENST00000608440 SCGB1D2O95969 90 aa11.2□□□□□ -0.62
CTCFL-218ENST00000608440 STATHP02808 62 aa11.2□□□□□ -0.62
CTCFL-218ENST00000608440 MMP9P14780 707 aa11.2□□□□□ -0.62
CTCFL-218ENST00000608440 CCKBRP32239 447 aa11.2□□□□□ -0.62
CTCFL-218ENST00000608440 FRKP42685 505 aaPredicted RBP11.2□□□□□ -0.62
CTCFL-218ENST00000608440 RND3P61587 244 aa11.2□□□□□ -0.62
CTCFL-218ENST00000608440 CLEC12BQ2HXU8 276 aa11.2□□□□□ -0.62
CTCFL-218ENST00000608440 Q5PR19 223 aa11.2□□□□□ -0.62
CTCFL-218ENST00000608440 FAHD2BQ6P2I3 314 aaPredicted RBP11.2□□□□□ -0.62
CTCFL-218ENST00000608440 OPN5Q6U736 354 aa11.2□□□□□ -0.62
CTCFL-218ENST00000608440 KMT5CQ86Y97 462 aa11.2□□□□□ -0.62
CTCFL-218ENST00000608440 GBGT1Q8N5D6 347 aa11.2□□□□□ -0.62
CTCFL-218ENST00000608440 COX18Q8N8Q8 333 aa11.2□□□□□ -0.62
CTCFL-218ENST00000608440 SLC24A4Q8NFF2 622 aa11.2□□□□□ -0.62
CTCFL-218ENST00000608440 ZNF417Q8TAU3 575 aa11.2□□□□□ -0.62
CTCFL-218ENST00000608440 RNF128Q8TEB7 428 aa11.2□□□□□ -0.62
CTCFL-218ENST00000608440 METTL21AQ8WXB1 218 aa11.2□□□□□ -0.62
CTCFL-218ENST00000608440 FAHD2AQ96GK7 314 aa11.2□□□□□ -0.62
CTCFL-218ENST00000608440 SLC41A2Q96JW4 573 aa11.2□□□□□ -0.62
CTCFL-218ENST00000608440 FLRT3Q9NZU0 649 aa11.2□□□□□ -0.62
CTCFL-218ENST00000608440 CGGBP1Q9UFW8 167 aaPredicted RBP11.2□□□□□ -0.62
CTCFL-218ENST00000608440 ICAM5Q9UMF0 924 aa11.2□□□□□ -0.62
CTCFL-218ENST00000608440 GTF2A1LQ9UNN4 478 aa11.2□□□□□ -0.62
CTCFL-218ENST00000608440 IER3IP1Q9Y5U9 82 aa11.2□□□□□ -0.62
CTCFL-218ENST00000608440 TSPAN6O43657 245 aa11.19□□□□□ -0.62
CTCFL-218ENST00000608440 OR2J2O76002 312 aa11.19□□□□□ -0.62
CTCFL-218ENST00000608440 ZNF708P17019 499 aa11.19□□□□□ -0.62
CTCFL-218ENST00000608440 RPS27P42677 84 aaKnown RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms