RNA–Protein interactions for RNA: ENST00000604181.1

CCDC12-210, Transcript of coiled-coil domain containing 12, humanhuman

TSL 4

Gene CCDC12, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-210ENST00000604181 PRKXP51817 358 aa13.79□□□□□ -0.2
CCDC12-210ENST00000604181 KPRPQ5T749 579 aaPredicted RBP13.79□□□□□ -0.2
CCDC12-210ENST00000604181 METAP1DQ6UB28 335 aaPredicted RBP13.79□□□□□ -0.2
CCDC12-210ENST00000604181 C11orf44Q8N8P7 122 aa13.79□□□□□ -0.2
CCDC12-210ENST00000604181 CYB561A3Q8NBI2 242 aa13.79□□□□□ -0.2
CCDC12-210ENST00000604181 PPP1R35Q8TAP8 253 aa13.79□□□□□ -0.2
CCDC12-210ENST00000604181 LRRC29Q8WV35 223 aa13.79□□□□□ -0.2
CCDC12-210ENST00000604181 C17orf50Q8WW18 174 aa13.79□□□□□ -0.2
CCDC12-210ENST00000604181 IFT27Q9BW83 186 aa13.79□□□□□ -0.2
CCDC12-210ENST00000604181 AP3M1Q9Y2T2 418 aa13.79□□□□□ -0.2
CCDC12-210ENST00000604181 NOP16Q9Y3C1 178 aaKnown RBP13.79□□□□□ -0.2
CCDC12-210ENST00000604181 FAM32AQ9Y421 112 aaKnown RBP13.79□□□□□ -0.2
CCDC12-210ENST00000604181 N6AMT1Q9Y5N5 214 aa13.79□□□□□ -0.2
CCDC12-210ENST00000604181 MEGF11A6BM72 1044 aa13.78□□□□□ -0.2
CCDC12-210ENST00000604181 BHLHE40O14503 412 aa13.78□□□□□ -0.2
CCDC12-210ENST00000604181 NPFFO15130 113 aa13.78□□□□□ -0.2
CCDC12-210ENST00000604181 COX4I1P13073 169 aa13.78□□□□□ -0.2
CCDC12-210ENST00000604181 OR51L1Q8NGJ5 315 aa13.78□□□□□ -0.2
CCDC12-210ENST00000604181 SPTSSAQ969W0 71 aa13.78□□□□□ -0.2
CCDC12-210ENST00000604181 PPA2Q9H2U2 334 aa13.78□□□□□ -0.2
CCDC12-210ENST00000604181 MRGBPQ9NV56 204 aa13.78□□□□□ -0.2
CCDC12-210ENST00000604181 FOXJ3Q9UPW0 622 aa13.78□□□□□ -0.2
CCDC12-210ENST00000604181 V9GYQ6 96 aa13.78□□□□□ -0.2
CCDC12-210ENST00000604181 OPN1MWP04001 364 aa13.77□□□□□ -0.21
CCDC12-210ENST00000604181 OPN1MW2P0DN77 364 aa13.77□□□□□ -0.21
CCDC12-210ENST00000604181 OPN1MW3P0DN78 364 aa13.77□□□□□ -0.21
CCDC12-210ENST00000604181 SAA4P35542 130 aa13.77□□□□□ -0.21
CCDC12-210ENST00000604181 TGFBR2P37173 567 aa13.77□□□□□ -0.21
CCDC12-210ENST00000604181 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.77□□□□□ -0.21
CCDC12-210ENST00000604181 IKZF1Q13422 519 aa13.77□□□□□ -0.21
CCDC12-210ENST00000604181 C11orf91Q3C1V1 193 aa13.77□□□□□ -0.21
CCDC12-210ENST00000604181 DRAM2Q6UX65 266 aa13.77□□□□□ -0.21
CCDC12-210ENST00000604181 WDR82Q6UXN9 313 aa13.77□□□□□ -0.21
CCDC12-210ENST00000604181 C1orf122Q6ZSJ8 110 aa13.77□□□□□ -0.21
CCDC12-210ENST00000604181 DCXRQ7Z4W1 244 aa13.77□□□□□ -0.21
CCDC12-210ENST00000604181 SPERTQ8NA61 448 aa13.77□□□□□ -0.21
CCDC12-210ENST00000604181 OR5T2Q8NGG2 359 aa13.77□□□□□ -0.21
CCDC12-210ENST00000604181 RP9Q8TA86 221 aaKnown RBP13.77□□□□□ -0.21
CCDC12-210ENST00000604181 KCTD14Q9BQ13 255 aaPredicted RBP13.77□□□□□ -0.21
CCDC12-210ENST00000604181 DCTN5Q9BTE1 182 aa13.77□□□□□ -0.21
CCDC12-210ENST00000604181 NSRP1Q9H0G5 558 aaKnown RBP13.77□□□□□ -0.21
CCDC12-210ENST00000604181 TOR3AQ9H497 397 aa13.77□□□□□ -0.21
CCDC12-210ENST00000604181 PRPF19Q9UMS4 504 aaKnown RBP13.77□□□□□ -0.21
CCDC12-210ENST00000604181 RYR3Q15413 4870 aa13.76□□□□□ -0.21
CCDC12-210ENST00000604181 SEMG1P04279 462 aa13.76□□□□□ -0.21
CCDC12-210ENST00000604181 PAX6P26367 422 aa13.76□□□□□ -0.21
CCDC12-210ENST00000604181 NOS3P29474 1203 aa13.76□□□□□ -0.21
CCDC12-210ENST00000604181 GSSP48637 474 aa13.76□□□□□ -0.21
CCDC12-210ENST00000604181 TGM4P49221 684 aa13.76□□□□□ -0.21
CCDC12-210ENST00000604181 GMFBP60983 142 aa13.76□□□□□ -0.21
CCDC12-210ENST00000604181 MICBQ29980 383 aa13.76□□□□□ -0.21
CCDC12-210ENST00000604181 KLHL12Q53G59 568 aa13.76□□□□□ -0.21
CCDC12-210ENST00000604181 ZDHHC21Q8IVQ6 265 aa13.76□□□□□ -0.21
CCDC12-210ENST00000604181 OR1M1Q8NGA1 313 aa13.76□□□□□ -0.21
CCDC12-210ENST00000604181 SPSB4Q96A44 273 aa13.76□□□□□ -0.21
CCDC12-210ENST00000604181 AJUBAQ96IF1 538 aa13.76□□□□□ -0.21
CCDC12-210ENST00000604181 COPS4Q9BT78 406 aa13.76□□□□□ -0.21
CCDC12-210ENST00000604181 EGLN3Q9H6Z9 239 aa13.76□□□□□ -0.21
CCDC12-210ENST00000604181 RNPEPL1Q9HAU8 725 aa13.76□□□□□ -0.21
CCDC12-210ENST00000604181 DCAF13Q9NV06 445 aaKnown RBP13.76□□□□□ -0.21
CCDC12-210ENST00000604181 ABCD2Q9UBJ2 740 aa13.76□□□□□ -0.21
CCDC12-210ENST00000604181 FBLN5Q9UBX5 448 aa13.76□□□□□ -0.21
CCDC12-210ENST00000604181 KCNG2Q9UJ96 466 aa13.76□□□□□ -0.21
CCDC12-210ENST00000604181 COMMD3-BMI1R4GMX3 469 aa13.76□□□□□ -0.21
CCDC12-210ENST00000604181 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.75□□□□□ -0.21
CCDC12-210ENST00000604181 MEIOCA2RUB1 952 aa13.75□□□□□ -0.21
CCDC12-210ENST00000604181 BTBD17A6NE02 478 aa13.75□□□□□ -0.21
CCDC12-210ENST00000604181 SLC22A2O15244 555 aa13.75□□□□□ -0.21
CCDC12-210ENST00000604181 MUC1P15941 1255 aaPredicted RBP13.75□□□□□ -0.21
CCDC12-210ENST00000604181 ZNF823P16415 610 aa13.75□□□□□ -0.21
CCDC12-210ENST00000604181 GABRA5P31644 462 aa13.75□□□□□ -0.21
CCDC12-210ENST00000604181 EFNB2P52799 333 aa13.75□□□□□ -0.21
CCDC12-210ENST00000604181 FAM3AP98173 230 aa13.75□□□□□ -0.21
CCDC12-210ENST00000604181 SPIBQ01892 262 aa13.75□□□□□ -0.21
CCDC12-210ENST00000604181 HERPUD1Q15011 391 aa13.75□□□□□ -0.21
CCDC12-210ENST00000604181 FAM189A2Q15884 450 aa13.75□□□□□ -0.21
CCDC12-210ENST00000604181 STUMQ69YW2 141 aa13.75□□□□□ -0.21
CCDC12-210ENST00000604181 GLYATQ6IB77 296 aa13.75□□□□□ -0.21
CCDC12-210ENST00000604181 HCP5Q6MZN7 132 aa13.75□□□□□ -0.21
CCDC12-210ENST00000604181 SLC16A9Q7RTY1 509 aa13.75□□□□□ -0.21
CCDC12-210ENST00000604181 DPY19L4Q7Z388 723 aa13.75□□□□□ -0.21
CCDC12-210ENST00000604181 OR9Q1Q8NGQ5 310 aa13.75□□□□□ -0.21
CCDC12-210ENST00000604181 C8orf46Q8TAG6 207 aa13.75□□□□□ -0.21
CCDC12-210ENST00000604181 NPRL2Q8WTW4 380 aa13.75□□□□□ -0.21
CCDC12-210ENST00000604181 ITPKCQ96DU7 683 aa13.75□□□□□ -0.21
CCDC12-210ENST00000604181 HOPXQ9BPY8 73 aaPredicted RBP13.75□□□□□ -0.21
CCDC12-210ENST00000604181 WDR13Q9H1Z4 485 aa13.75□□□□□ -0.21
CCDC12-210ENST00000604181 KRCC1Q9NPI7 259 aaPredicted RBP13.75□□□□□ -0.21
CCDC12-210ENST00000604181 SNTG1Q9NSN8 517 aa13.75□□□□□ -0.21
CCDC12-210ENST00000604181 C14orf119Q9NWQ9 140 aa13.75□□□□□ -0.21
CCDC12-210ENST00000604181 DNAH9Q9NYC9 4486 aa13.75□□□□□ -0.21
CCDC12-210ENST00000604181 ANKRD61A6NGH8 418 aa13.74□□□□□ -0.21
CCDC12-210ENST00000604181 CDIPTO14735 213 aa13.74□□□□□ -0.21
CCDC12-210ENST00000604181 GPR37O15354 613 aa13.74□□□□□ -0.21
CCDC12-210ENST00000604181 IDH3BO43837 385 aa13.74□□□□□ -0.21
CCDC12-210ENST00000604181 SASH3O75995 380 aa13.74□□□□□ -0.21
CCDC12-210ENST00000604181 ALX3O95076 343 aa13.74□□□□□ -0.21
CCDC12-210ENST00000604181 GADD45GO95257 159 aa13.74□□□□□ -0.21
CCDC12-210ENST00000604181 LY6EQ16553 131 aa13.74□□□□□ -0.21
CCDC12-210ENST00000604181 LYG1Q8N1E2 194 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms