RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 OR2AK2Q8NG84 335 aa4.43□□□□□ -1.7
SPTBN1-206ENST00000602898 OR10X1Q8NGY0 326 aa4.43□□□□□ -1.7
SPTBN1-206ENST00000602898 ZNF675Q8TD23 568 aa4.43□□□□□ -1.7
SPTBN1-206ENST00000602898 SPRYD4Q8WW59 207 aaPredicted RBP4.43□□□□□ -1.7
SPTBN1-206ENST00000602898 CTHRC1Q96CG8 243 aa4.43□□□□□ -1.7
SPTBN1-206ENST00000602898 NTNG2Q96CW9 530 aa4.43□□□□□ -1.7
SPTBN1-206ENST00000602898 PHYHIPLQ96FC7 376 aa4.43□□□□□ -1.7
SPTBN1-206ENST00000602898 TIMP4Q99727 224 aa4.43□□□□□ -1.7
SPTBN1-206ENST00000602898 FAAP24Q9BTP7 215 aa4.43□□□□□ -1.7
SPTBN1-206ENST00000602898 HCAR1Q9BXC0 346 aa4.43□□□□□ -1.7
SPTBN1-206ENST00000602898 SLC2A9Q9NRM0 540 aa4.43□□□□□ -1.7
SPTBN1-206ENST00000602898 LOC105371242A0A075B767 164 aa4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 A0A0G2JN53 185 aa4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 ZNF724A8MTY0 619 aa4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 J3QLI3 93 aa4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 CCL25O15444 150 aa4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 DIRAS1O95057 198 aa4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 IL18BPO95998 194 aa4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 APODP05090 189 aa4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 BMP5P22003 454 aa4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 RAB8AP61006 207 aa4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 SEC61A1P61619 476 aaKnown RBP4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 RPL32P62910 135 aaKnown RBP4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 ADAM8P78325 824 aa4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 ACVR1Q04771 509 aa4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 TCP10Q12799 353 aa4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 SRSF6Q13247 344 aaKnown RBP4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 CRMP1Q14194 572 aa4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 TAF9Q16594 264 aa4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 KHDC3LQ587J8 217 aa4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 COL5A1-AS1Q5SY13 56 aa4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 EIF5AL1Q6IS14 154 aaKnown RBP4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 MFSD12Q6NUT3 480 aa4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 TMEM25Q86YD3 366 aa4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 LYG1Q8N1E2 194 aa4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 TMEM151AQ8N4L1 468 aa4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 SPICQ8N5J4 248 aa4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 JAGN1Q8N5M9 183 aa4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 SIDT2Q8NBJ9 832 aaKnown RBP4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 HMGCLL1Q8TB92 370 aa4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 FEZF2Q8TBJ5 459 aa4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 C11orf40Q8WZ69 217 aa4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 RSPRY1Q96DX4 576 aa4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 ZNF488Q96MN9 340 aa4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 CLCC1Q96S66 551 aa4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 P2RX4Q99571 388 aa4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 DPAGT1Q9H3H5 408 aa4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 METTL17Q9H7H0 456 aaPredicted RBP4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 TMEM27Q9HBJ8 222 aa4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 ACKR4Q9NPB9 350 aa4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 UBQLN1Q9UMX0 589 aaKnown RBP4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 C3orf70A6NLC5 250 aaPredicted RBP4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 SYNGR3O43761 229 aa4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 TOMM40O96008 361 aa4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 JCHAINP01591 159 aa4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 GGT1P19440 569 aa4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 CXCR1P25024 350 aa4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 SDC2P34741 201 aa4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 MAGEA3P43357 314 aa4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 GABRA4P48169 554 aa4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 CYB561P49447 251 aa4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 ATP4BP51164 291 aa4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 DAP3P51398 398 aaKnown RBP4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 GEMP55040 296 aa4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 RRADP55042 308 aa4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 CDH12P55289 794 aa4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 MLLT11Q13015 90 aaPredicted RBP4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 MAD2L1BPQ15013 274 aaPredicted RBP4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 ABRAXAS2Q15018 415 aa4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 TIMM23BQ5SRD1 257 aa4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 BPIFB2Q8N4F0 458 aa4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 ZNF611Q8N823 705 aa4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 GPR26Q8NDV2 337 aa4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 OR10R2Q8NGX6 335 aa4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 SLC38A5Q8WUX1 472 aa4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 MYLIPQ8WY64 445 aa4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 NDRG1Q92597 394 aaKnown RBP4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 RERGQ96A58 199 aaPredicted RBP4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 SLC25A46Q96AG3 418 aa4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 ANKRD9Q96BM1 317 aaPredicted RBP4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 SMARCD1Q96GM5 515 aa4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 GATA5Q9BWX5 397 aaPredicted RBP4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 SLC25A19Q9HC21 320 aa4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 EML4Q9HC35 981 aaKnown RBP4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 SLC52A3Q9NQ40 469 aa4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 TIMM10BQ9Y5J6 103 aa4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 FRMPD3Q5JV73 1810 aa4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 A0A1W2PS29 197 aa4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 ZNF670-ZNF695F2Z2N8 137 aa4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 G3V2L1 256 aa4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 TPST2O60704 377 aa4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 TOXO94900 526 aa4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 GCGP01275 180 aa4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 CSN3P07498 182 aa4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 GTF2F2P13984 249 aa4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 SLC2A5P22732 501 aa4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 ANOS1P23352 680 aa4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 GCSHP23434 173 aa4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 SLC6A8P48029 635 aa4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 PDLIM4P50479 330 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms