RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 ZNF705DP0CH99 300 aaPredicted RBP7.92□□□□□ -1.14
COMMD3-215ENST00000602574 ZNF705BP0CI00 300 aaPredicted RBP7.92□□□□□ -1.14
COMMD3-215ENST00000602574 ARL2P36404 184 aa7.92□□□□□ -1.14
COMMD3-215ENST00000602574 GABRA2P47869 451 aa7.92□□□□□ -1.14
COMMD3-215ENST00000602574 LILRA4P59901 499 aa7.92□□□□□ -1.14
COMMD3-215ENST00000602574 DOK7Q18PE1 504 aa7.92□□□□□ -1.14
COMMD3-215ENST00000602574 TDRG1Q3Y452 100 aa7.92□□□□□ -1.14
COMMD3-215ENST00000602574 TMEM177Q53S58 311 aa7.92□□□□□ -1.14
COMMD3-215ENST00000602574 SOHLH1Q5JUK2 328 aa7.92□□□□□ -1.14
COMMD3-215ENST00000602574 C1orf189Q5VU69 101 aa7.92□□□□□ -1.14
COMMD3-215ENST00000602574 ZNF585AQ6P3V2 769 aa7.92□□□□□ -1.14
COMMD3-215ENST00000602574 UNQ5815/PRO19632Q6UWF5 114 aa7.92□□□□□ -1.14
COMMD3-215ENST00000602574 NPEPL1Q8NDH3 523 aa7.92□□□□□ -1.14
COMMD3-215ENST00000602574 OR9K2Q8NGE7 335 aa7.92□□□□□ -1.14
COMMD3-215ENST00000602574 OR1N2Q8NGR9 330 aa7.92□□□□□ -1.14
COMMD3-215ENST00000602574 OR13C9Q8NGT0 318 aa7.92□□□□□ -1.14
COMMD3-215ENST00000602574 OR6K2Q8NGY2 324 aa7.92□□□□□ -1.14
COMMD3-215ENST00000602574 SUN3Q8TAQ9 357 aa7.92□□□□□ -1.14
COMMD3-215ENST00000602574 FAM46BQ96A09 425 aa7.92□□□□□ -1.14
COMMD3-215ENST00000602574 APH1AQ96BI3 265 aa7.92□□□□□ -1.14
COMMD3-215ENST00000602574 PYGO2Q9BRQ0 406 aa7.92□□□□□ -1.14
COMMD3-215ENST00000602574 DUSP16Q9BY84 665 aa7.92□□□□□ -1.14
COMMD3-215ENST00000602574 WIPI2Q9Y4P8 454 aa7.92□□□□□ -1.14
COMMD3-215ENST00000602574 SMCHD1A6NHR9 2005 aa7.92□□□□□ -1.14
COMMD3-215ENST00000602574 TRAV1-2A0A0B4J238 106 aa7.91□□□□□ -1.14
COMMD3-215ENST00000602574 C4orf47A7E2U8 309 aa7.91□□□□□ -1.14
COMMD3-215ENST00000602574 HEPACAM2A8MVW5 462 aa7.91□□□□□ -1.14
COMMD3-215ENST00000602574 FCMRO60667 390 aa7.91□□□□□ -1.14
COMMD3-215ENST00000602574 CEACAM1P13688 526 aa7.91□□□□□ -1.14
COMMD3-215ENST00000602574 SAT1P21673 171 aa7.91□□□□□ -1.14
COMMD3-215ENST00000602574 ENDOGQ14249 297 aaKnown RBP7.91□□□□□ -1.14
COMMD3-215ENST00000602574 DUSP5Q16690 384 aa7.91□□□□□ -1.14
COMMD3-215ENST00000602574 ZNF658BQ4V348 819 aaPredicted RBP7.91□□□□□ -1.14
COMMD3-215ENST00000602574 TMEM240Q5SV17 173 aa7.91□□□□□ -1.14
COMMD3-215ENST00000602574 Q6ZRG5 221 aa7.91□□□□□ -1.14
COMMD3-215ENST00000602574 TMPRSS12Q86WS5 348 aa7.91□□□□□ -1.14
COMMD3-215ENST00000602574 SPNS2Q8IVW8 549 aa7.91□□□□□ -1.14
COMMD3-215ENST00000602574 TTC16Q8NEE8 873 aa7.91□□□□□ -1.14
COMMD3-215ENST00000602574 SLC2A12Q8TD20 617 aa7.91□□□□□ -1.14
COMMD3-215ENST00000602574 PPP1R1CQ8WVI7 109 aa7.91□□□□□ -1.14
COMMD3-215ENST00000602574 FGF11Q92914 225 aa7.91□□□□□ -1.14
COMMD3-215ENST00000602574 TMEM45BQ96B21 275 aa7.91□□□□□ -1.14
COMMD3-215ENST00000602574 SLC35G5Q96KT7 338 aa7.91□□□□□ -1.14
COMMD3-215ENST00000602574 HIST1H2AAQ96QV6 131 aa7.91□□□□□ -1.14
COMMD3-215ENST00000602574 DOHHQ9BU89 302 aa7.91□□□□□ -1.14
COMMD3-215ENST00000602574 SNRNP25Q9BV90 132 aaKnown RBP7.91□□□□□ -1.14
COMMD3-215ENST00000602574 OR52D1Q9H346 318 aa7.91□□□□□ -1.14
COMMD3-215ENST00000602574 GEMIN7Q9H840 131 aaKnown RBP7.91□□□□□ -1.14
COMMD3-215ENST00000602574 INPP5EQ9NRR6 644 aa7.91□□□□□ -1.14
COMMD3-215ENST00000602574 RLIMQ9NVW2 624 aa7.91□□□□□ -1.14
COMMD3-215ENST00000602574 ZNF586Q9NXT0 402 aa7.91□□□□□ -1.14
COMMD3-215ENST00000602574 CGGBP1Q9UFW8 167 aaPredicted RBP7.91□□□□□ -1.14
COMMD3-215ENST00000602574 RFNGQ9Y644 331 aa7.91□□□□□ -1.14
COMMD3-215ENST00000602574 NPIPB15A6NHN6 443 aaPredicted RBP7.91□□□□□ -1.14
COMMD3-215ENST00000602574 C1QTNF9BB2RNN3 333 aa7.91□□□□□ -1.14
COMMD3-215ENST00000602574 RAB27BO00194 218 aa7.91□□□□□ -1.14
COMMD3-215ENST00000602574 PDE6DO43924 150 aa7.91□□□□□ -1.14
COMMD3-215ENST00000602574 DUSP11O75319 330 aaKnown RBP7.91□□□□□ -1.14
COMMD3-215ENST00000602574 ALOX12BO75342 701 aa7.91□□□□□ -1.14
COMMD3-215ENST00000602574 GPANK1O95872 356 aa7.91□□□□□ -1.14
COMMD3-215ENST00000602574 GAPDHP04406 335 aaKnown RBP7.91□□□□□ -1.14
COMMD3-215ENST00000602574 LIMS3P0CW19 117 aa7.91□□□□□ -1.14
COMMD3-215ENST00000602574 LIMS4P0CW20 117 aa7.91□□□□□ -1.14
COMMD3-215ENST00000602574 NID1P14543 1247 aa7.91□□□□□ -1.14
COMMD3-215ENST00000602574 GABRA3P34903 492 aa7.91□□□□□ -1.14
COMMD3-215ENST00000602574 CTRLP40313 264 aa7.91□□□□□ -1.14
COMMD3-215ENST00000602574 ID1P41134 155 aa7.91□□□□□ -1.14
COMMD3-215ENST00000602574 HNRNPA3P51991 378 aaKnown RBP7.91□□□□□ -1.14
COMMD3-215ENST00000602574 SSBP1Q04837 148 aaKnown RBP7.91□□□□□ -1.14
COMMD3-215ENST00000602574 SRSF6Q13247 344 aaKnown RBP7.91□□□□□ -1.14
COMMD3-215ENST00000602574 FZD2Q14332 565 aa7.91□□□□□ -1.14
COMMD3-215ENST00000602574 TAF13Q15543 124 aa7.91□□□□□ -1.14
COMMD3-215ENST00000602574 TMEM182Q6ZP80 229 aaPredicted RBP7.91□□□□□ -1.14
COMMD3-215ENST00000602574 MRGPRGQ86SM5 289 aa7.91□□□□□ -1.14
COMMD3-215ENST00000602574 C17orf64Q86WR6 236 aa7.91□□□□□ -1.14
COMMD3-215ENST00000602574 KLHDC8AQ8IYD2 350 aa7.91□□□□□ -1.14
COMMD3-215ENST00000602574 SUMF2Q8NBJ7 301 aa7.91□□□□□ -1.14
COMMD3-215ENST00000602574 GPR119Q8TDV5 335 aa7.91□□□□□ -1.14
COMMD3-215ENST00000602574 SIGLEC12Q96PQ1 595 aa7.91□□□□□ -1.14
COMMD3-215ENST00000602574 AQP10Q96PS8 301 aa7.91□□□□□ -1.14
COMMD3-215ENST00000602574 OR6C1Q96RD1 312 aa7.91□□□□□ -1.14
COMMD3-215ENST00000602574 RERGLQ9H628 205 aa7.91□□□□□ -1.14
COMMD3-215ENST00000602574 IL36AQ9UHA7 158 aa7.91□□□□□ -1.14
COMMD3-215ENST00000602574 CCL27Q9Y4X3 112 aa7.91□□□□□ -1.14
COMMD3-215ENST00000602574 SBF1O95248 1867 aa7.9□□□□□ -1.14
COMMD3-215ENST00000602574 NUP210LQ5VU65 1888 aa7.9□□□□□ -1.14
COMMD3-215ENST00000602574 A0A087WV62 115 aa7.9□□□□□ -1.14
COMMD3-215ENST00000602574 IGSF23A1L1A6 192 aa7.9□□□□□ -1.14
COMMD3-215ENST00000602574 ZNF860A6NHJ4 632 aa7.9□□□□□ -1.14
COMMD3-215ENST00000602574 FTCDNL1E5RQL4 147 aa7.9□□□□□ -1.14
COMMD3-215ENST00000602574 H7BYZ3 331 aa7.9□□□□□ -1.14
COMMD3-215ENST00000602574 ITGB2P05107 769 aa7.9□□□□□ -1.14
COMMD3-215ENST00000602574 OR12D1P0DN82 309 aa7.9□□□□□ -1.14
COMMD3-215ENST00000602574 PNMTP11086 282 aa7.9□□□□□ -1.14
COMMD3-215ENST00000602574 OMGP23515 440 aa7.9□□□□□ -1.14
COMMD3-215ENST00000602574 PSMB4P28070 264 aa7.9□□□□□ -1.14
COMMD3-215ENST00000602574 CMPK1P30085 196 aa7.9□□□□□ -1.14
COMMD3-215ENST00000602574 LBX1P52954 281 aa7.9□□□□□ -1.14
COMMD3-215ENST00000602574 COL10A1Q03692 680 aa7.9□□□□□ -1.14
COMMD3-215ENST00000602574 EGR4Q05215 589 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms