RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 NAT2P11245 290 aa17.07■□□□□ 0.32
SHKBP1-222ENST00000600320 SELEP16581 610 aa17.07■□□□□ 0.32
SHKBP1-222ENST00000600320 CDKN1AP38936 164 aa17.07■□□□□ 0.32
SHKBP1-222ENST00000600320 SLC3A1Q07837 685 aa17.07■□□□□ 0.32
SHKBP1-222ENST00000600320 ACSM1Q08AH1 577 aa17.07■□□□□ 0.32
SHKBP1-222ENST00000600320 SVOPQ8N4V2 548 aa17.07■□□□□ 0.32
SHKBP1-222ENST00000600320 ZNF676Q8N7Q3 588 aa17.07■□□□□ 0.32
SHKBP1-222ENST00000600320 RGP1Q92546 391 aaPredicted RBP17.07■□□□□ 0.32
SHKBP1-222ENST00000600320 SMIM19Q96E16 107 aa17.07■□□□□ 0.32
SHKBP1-222ENST00000600320 NR1H4Q96RI1 486 aaPredicted RBP17.07■□□□□ 0.32
SHKBP1-222ENST00000600320 PPP1R3EQ9H7J1 279 aa17.07■□□□□ 0.32
SHKBP1-222ENST00000600320 DYNLRB1Q9NP97 96 aa17.07■□□□□ 0.32
SHKBP1-222ENST00000600320 V9GYS6 101 aa17.07■□□□□ 0.32
SHKBP1-222ENST00000600320 CENPEQ02224 2701 aa17.07■□□□□ 0.32
SHKBP1-222ENST00000600320 TEX15Q9BXT5 2789 aa17.06■□□□□ 0.32
SHKBP1-222ENST00000600320 A0A1B0GVI7 797 aa17.06■□□□□ 0.32
SHKBP1-222ENST00000600320 TMEM212A6NML5 194 aa17.06■□□□□ 0.32
SHKBP1-222ENST00000600320 OVOL3O00110 214 aa17.06■□□□□ 0.32
SHKBP1-222ENST00000600320 SYT7O43581 403 aa17.06■□□□□ 0.32
SHKBP1-222ENST00000600320 DHRS3O75911 302 aa17.06■□□□□ 0.32
SHKBP1-222ENST00000600320 RAF1P04049 648 aa17.06■□□□□ 0.32
SHKBP1-222ENST00000600320 ISG15P05161 165 aa17.06■□□□□ 0.32
SHKBP1-222ENST00000600320 ACHEP22303 614 aa17.06■□□□□ 0.32
SHKBP1-222ENST00000600320 TAS2R43P59537 309 aa17.06■□□□□ 0.32
SHKBP1-222ENST00000600320 BDH1Q02338 343 aa17.06■□□□□ 0.32
SHKBP1-222ENST00000600320 TMEM244Q5VVB8 128 aa17.06■□□□□ 0.32
SHKBP1-222ENST00000600320 DOK3Q7L591 496 aa17.06■□□□□ 0.32
SHKBP1-222ENST00000600320 ZNF367Q7RTV3 350 aa17.06■□□□□ 0.32
SHKBP1-222ENST00000600320 OR8G5Q8NG78 346 aa17.06■□□□□ 0.32
SHKBP1-222ENST00000600320 OR51A4Q8NGJ6 313 aa17.06■□□□□ 0.32
SHKBP1-222ENST00000600320 OR5AK2Q8NH90 309 aa17.06■□□□□ 0.32
SHKBP1-222ENST00000600320 PGLYRP3Q96LB9 341 aa17.06■□□□□ 0.32
SHKBP1-222ENST00000600320 OPALINQ96PE5 141 aa17.06■□□□□ 0.32
SHKBP1-222ENST00000600320 TPK1Q9H3S4 243 aa17.06■□□□□ 0.32
SHKBP1-222ENST00000600320 CRYBG3Q68DQ2 2970 aa17.06■□□□□ 0.32
SHKBP1-222ENST00000600320 LOC390937A0A1W2PQ73 354 aa17.05■□□□□ 0.32
SHKBP1-222ENST00000600320 HSMCR30P0CW71 290 aa17.05■□□□□ 0.32
SHKBP1-222ENST00000600320 MAGEB1P43366 347 aa17.05■□□□□ 0.32
SHKBP1-222ENST00000600320 MOGQ16653 247 aa17.05■□□□□ 0.32
SHKBP1-222ENST00000600320 TSPAN14Q8NG11 270 aa17.05■□□□□ 0.32
SHKBP1-222ENST00000600320 OR13C5Q8NGS8 318 aa17.05■□□□□ 0.32
SHKBP1-222ENST00000600320 SLC30A2Q9BRI3 323 aa17.05■□□□□ 0.32
SHKBP1-222ENST00000600320 RHBDD3Q9Y3P4 386 aa17.05■□□□□ 0.32
SHKBP1-222ENST00000600320 NOTCH2Q04721 2471 aa17.04■□□□□ 0.32
SHKBP1-222ENST00000600320 A6NIN4 97 aa17.04■□□□□ 0.32
SHKBP1-222ENST00000600320 C17orf100A8MU93 164 aa17.04■□□□□ 0.32
SHKBP1-222ENST00000600320 H0YL77 283 aa17.04■□□□□ 0.32
SHKBP1-222ENST00000600320 MLNRO43193 412 aa17.04■□□□□ 0.32
SHKBP1-222ENST00000600320 SPRY3O43610 288 aa17.04■□□□□ 0.32
SHKBP1-222ENST00000600320 PLPP2O43688 288 aa17.04■□□□□ 0.32
SHKBP1-222ENST00000600320 SMIM18P0DKX4 95 aa17.04■□□□□ 0.32
SHKBP1-222ENST00000600320 ATP6V1B1P15313 513 aa17.04■□□□□ 0.32
SHKBP1-222ENST00000600320 FAHP16930 419 aa17.04■□□□□ 0.32
SHKBP1-222ENST00000600320 CELP19835 753 aa17.04■□□□□ 0.32
SHKBP1-222ENST00000600320 DDOSTP39656 456 aa17.04■□□□□ 0.32
SHKBP1-222ENST00000600320 MAP2K3P46734 347 aa17.04■□□□□ 0.32
SHKBP1-222ENST00000600320 PPOXP50336 477 aa17.04■□□□□ 0.32
SHKBP1-222ENST00000600320 ZNF81P51508 661 aa17.04■□□□□ 0.32
SHKBP1-222ENST00000600320 MLLT11Q13015 90 aaPredicted RBP17.04■□□□□ 0.32
SHKBP1-222ENST00000600320 UBE2UQ5VVX9 321 aa17.04■□□□□ 0.32
SHKBP1-222ENST00000600320 SEMA6DQ8NFY4 1073 aa17.04■□□□□ 0.32
SHKBP1-222ENST00000600320 GHSRQ92847 366 aa17.04■□□□□ 0.32
SHKBP1-222ENST00000600320 DVL3Q92997 716 aaPredicted RBP17.04■□□□□ 0.32
SHKBP1-222ENST00000600320 MGLLQ99685 303 aa17.04■□□□□ 0.32
SHKBP1-222ENST00000600320 COMMD4Q9H0A8 199 aa17.04■□□□□ 0.32
SHKBP1-222ENST00000600320 ISYNA1Q9NPH2 558 aa17.04■□□□□ 0.32
SHKBP1-222ENST00000600320 GPR160Q9UJ42 338 aa17.04■□□□□ 0.32
SHKBP1-222ENST00000600320 HHLA2Q9UM44 414 aa17.04■□□□□ 0.32
SHKBP1-222ENST00000600320 PLSCR5A0PG75 271 aa17.03■□□□□ 0.32
SHKBP1-222ENST00000600320 NDUFS7O75251 213 aa17.03■□□□□ 0.32
SHKBP1-222ENST00000600320 MTRF1O75570 445 aaKnown RBP17.03■□□□□ 0.32
SHKBP1-222ENST00000600320 INMTO95050 263 aa17.03■□□□□ 0.32
SHKBP1-222ENST00000600320 IGHV1-46P01743 117 aa17.03■□□□□ 0.32
SHKBP1-222ENST00000600320 HLA-DPB1P04440 258 aa17.03■□□□□ 0.32
SHKBP1-222ENST00000600320 CA6P23280 308 aa17.03■□□□□ 0.32
SHKBP1-222ENST00000600320 RPS11P62280 158 aaKnown RBP eCLIP17.03■□□□□ 0.32
SHKBP1-222ENST00000600320 SPRNQ5BIV9 151 aa17.03■□□□□ 0.32
SHKBP1-222ENST00000600320 KCTD8Q6ZWB6 473 aa17.03■□□□□ 0.32
SHKBP1-222ENST00000600320 CSNK2A3Q8NEV1 391 aa17.03■□□□□ 0.32
SHKBP1-222ENST00000600320 SORCS2Q96PQ0 1159 aa17.03■□□□□ 0.32
SHKBP1-222ENST00000600320 VRK1Q99986 396 aaPredicted RBP17.03■□□□□ 0.32
SHKBP1-222ENST00000600320 CYSLTR2Q9NS75 346 aa17.03■□□□□ 0.32
SHKBP1-222ENST00000600320 TMEM100Q9NV29 134 aa17.03■□□□□ 0.32
SHKBP1-222ENST00000600320 MRPL15Q9P015 296 aaKnown RBP17.03■□□□□ 0.32
SHKBP1-222ENST00000600320 CGGBP1Q9UFW8 167 aaPredicted RBP17.03■□□□□ 0.32
SHKBP1-222ENST00000600320 PIGLQ9Y2B2 252 aa17.03■□□□□ 0.32
SHKBP1-222ENST00000600320 ZNF281Q9Y2X9 895 aa17.03■□□□□ 0.32
SHKBP1-222ENST00000600320 PMF1-BGLAPU3KQ54 211 aa17.03■□□□□ 0.32
SHKBP1-222ENST00000600320 DCHS2Q6V1P9 2916 aa17.03■□□□□ 0.32
SHKBP1-222ENST00000600320 CELSR2Q9HCU4 2923 aa17.03■□□□□ 0.32
SHKBP1-222ENST00000600320 A0A087WXM4 84 aa17.02■□□□□ 0.32
SHKBP1-222ENST00000600320 A0A1B0GWJ7 208 aa17.02■□□□□ 0.32
SHKBP1-222ENST00000600320 TRIM64CA6NLI5 447 aa17.02■□□□□ 0.32
SHKBP1-222ENST00000600320 ANKRD30BLA7E2S9 258 aa17.02■□□□□ 0.32
SHKBP1-222ENST00000600320 H7C417 338 aa17.02■□□□□ 0.32
SHKBP1-222ENST00000600320 CD1AP06126 327 aa17.02■□□□□ 0.32
SHKBP1-222ENST00000600320 LIPAP38571 399 aa17.02■□□□□ 0.32
SHKBP1-222ENST00000600320 RIPPLY1Q0D2K3 151 aa17.02■□□□□ 0.32
SHKBP1-222ENST00000600320 TPBGQ13641 420 aa17.02■□□□□ 0.32
SHKBP1-222ENST00000600320 NEDD8Q15843 81 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms