RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-227	ENST00000600026	AGAP6	Q5VW22	663 aa		18.82	■□□□□ 0.6
LTBP4-227	ENST00000600026	C11orf71	Q6IPW1	123 aa		18.82	■□□□□ 0.6
LTBP4-227	ENST00000600026	PGAP1	Q75T13	922 aa		18.82	■□□□□ 0.6
LTBP4-227	ENST00000600026	DOK3	Q7L591	496 aa		18.82	■□□□□ 0.6
LTBP4-227	ENST00000600026	SPSB4	Q96A44	273 aa		18.82	■□□□□ 0.6
LTBP4-227	ENST00000600026	PGLYRP3	Q96LB9	341 aa		18.82	■□□□□ 0.6
LTBP4-227	ENST00000600026	MRPL37	Q9BZE1	423 aa	Known RBP	18.82	■□□□□ 0.6
LTBP4-227	ENST00000600026	OR2J1	Q9GZK6	312 aa		18.82	■□□□□ 0.6
LTBP4-227	ENST00000600026	POFUT1	Q9H488	388 aa		18.82	■□□□□ 0.6
LTBP4-227	ENST00000600026	CBLN4	Q9NTU7	201 aa		18.82	■□□□□ 0.6
LTBP4-227	ENST00000600026	EDAR	Q9UNE0	448 aa		18.82	■□□□□ 0.6
LTBP4-227	ENST00000600026	SERPINA3	P01011	423 aa		18.81	■□□□□ 0.6
LTBP4-227	ENST00000600026	LIPA	P38571	399 aa		18.81	■□□□□ 0.6
LTBP4-227	ENST00000600026	ZNF92	Q03936	586 aa		18.81	■□□□□ 0.6
LTBP4-227	ENST00000600026	EFNB3	Q15768	340 aa		18.81	■□□□□ 0.6
LTBP4-227	ENST00000600026	SSX1	Q16384	188 aa		18.81	■□□□□ 0.6
LTBP4-227	ENST00000600026	FBXW12	Q6X9E4	464 aa		18.81	■□□□□ 0.6
LTBP4-227	ENST00000600026	GPR141	Q7Z602	305 aa		18.81	■□□□□ 0.6
LTBP4-227	ENST00000600026	LRP11	Q86VZ4	500 aa		18.81	■□□□□ 0.6
LTBP4-227	ENST00000600026	RDH10	Q8IZV5	341 aa		18.81	■□□□□ 0.6
LTBP4-227	ENST00000600026	GPR148	Q8TDV2	347 aa		18.81	■□□□□ 0.6
LTBP4-227	ENST00000600026	ITFG2	Q969R8	447 aa		18.81	■□□□□ 0.6
LTBP4-227	ENST00000600026	MARS2	Q96GW9	593 aa	Known RBP	18.81	■□□□□ 0.6
LTBP4-227	ENST00000600026	FAM71F1	Q96KD3	344 aa	Predicted RBP	18.81	■□□□□ 0.6
LTBP4-227	ENST00000600026	TMED9	Q9BVK6	235 aa		18.81	■□□□□ 0.6
LTBP4-227	ENST00000600026	PLK3	Q9H4B4	646 aa		18.81	■□□□□ 0.6
LTBP4-227	ENST00000600026	NDUFB11	Q9NX14	153 aa		18.81	■□□□□ 0.6
LTBP4-227	ENST00000600026	LRBA	P50851	2863 aa		18.8	■□□□□ 0.6
LTBP4-227	ENST00000600026		A0A1B0GTI1	187 aa		18.8	■□□□□ 0.6
LTBP4-227	ENST00000600026	IGLV3-1	P01715	115 aa		18.8	■□□□□ 0.6
LTBP4-227	ENST00000600026	ZNF250	P15622	560 aa		18.8	■□□□□ 0.6
LTBP4-227	ENST00000600026	SELE	P16581	610 aa		18.8	■□□□□ 0.6
LTBP4-227	ENST00000600026	CD36	P16671	472 aa		18.8	■□□□□ 0.6
LTBP4-227	ENST00000600026	CCL1	P22362	96 aa		18.8	■□□□□ 0.6
LTBP4-227	ENST00000600026	DNASE1	P24855	282 aa		18.8	■□□□□ 0.6
LTBP4-227	ENST00000600026	GABRA5	P31644	462 aa		18.8	■□□□□ 0.6
LTBP4-227	ENST00000600026	GK2	Q14410	553 aa	Predicted RBP	18.8	■□□□□ 0.6
LTBP4-227	ENST00000600026	MST1L	Q2TV78	715 aa		18.8	■□□□□ 0.6
LTBP4-227	ENST00000600026	OR13F1	Q8NGS4	319 aa		18.8	■□□□□ 0.6
LTBP4-227	ENST00000600026	TSEN15	Q8WW01	171 aa	Known RBP	18.8	■□□□□ 0.6
LTBP4-227	ENST00000600026	NINJ1	Q92982	152 aa		18.8	■□□□□ 0.6
LTBP4-227	ENST00000600026	LYZL4	Q96KX0	146 aa		18.8	■□□□□ 0.6
LTBP4-227	ENST00000600026	SYT3	Q9BQG1	590 aa		18.8	■□□□□ 0.6
LTBP4-227	ENST00000600026	REPIN1	Q9BWE0	567 aa	Known RBP	18.8	■□□□□ 0.6
LTBP4-227	ENST00000600026	MYEF2	Q9P2K5	600 aa	Known RBP	18.8	■□□□□ 0.6
LTBP4-227	ENST00000600026	LOC390937	A0A1W2PQ73	354 aa		18.79	■□□□□ 0.6
LTBP4-227	ENST00000600026	GGT3P	A6NGU5	568 aa		18.79	■□□□□ 0.6
LTBP4-227	ENST00000600026		B9A039	149 aa		18.79	■□□□□ 0.6
LTBP4-227	ENST00000600026	RAC2	P15153	192 aa		18.79	■□□□□ 0.6
LTBP4-227	ENST00000600026	MPV17	P39210	176 aa		18.79	■□□□□ 0.6
LTBP4-227	ENST00000600026	MAP2K3	P46734	347 aa		18.79	■□□□□ 0.6
LTBP4-227	ENST00000600026	SELENOV	P59797	346 aa		18.79	■□□□□ 0.6
LTBP4-227	ENST00000600026	RPS25	P62851	125 aa	Known RBP	18.79	■□□□□ 0.6
LTBP4-227	ENST00000600026	HLX	Q14774	488 aa	Predicted RBP	18.79	■□□□□ 0.6
LTBP4-227	ENST00000600026	SWI5	Q1ZZU3	235 aa		18.79	■□□□□ 0.6
LTBP4-227	ENST00000600026	PLPP7	Q8NBV4	271 aa		18.79	■□□□□ 0.6
LTBP4-227	ENST00000600026	SYNPR	Q8TBG9	265 aa		18.79	■□□□□ 0.6
LTBP4-227	ENST00000600026	KLF14	Q8TD94	323 aa	Predicted RBP	18.79	■□□□□ 0.6
LTBP4-227	ENST00000600026	THRSP	Q92748	146 aa		18.79	■□□□□ 0.6
LTBP4-227	ENST00000600026	PIGT	Q969N2	578 aa		18.79	■□□□□ 0.6
LTBP4-227	ENST00000600026	CMBL	Q96DG6	245 aa		18.79	■□□□□ 0.6
LTBP4-227	ENST00000600026	DUSP13	Q9UII6	198 aa		18.79	■□□□□ 0.6
LTBP4-227	ENST00000600026	DHDH	Q9UQ10	334 aa		18.79	■□□□□ 0.6
LTBP4-227	ENST00000600026	ARFGEF3	Q5TH69	2177 aa		18.79	■□□□□ 0.6
LTBP4-227	ENST00000600026	IGLV3-9	A0A075B6K5	115 aa		18.78	■□□□□ 0.6
LTBP4-227	ENST00000600026	hCG_38984	A0A1B0GV85	526 aa		18.78	■□□□□ 0.6
LTBP4-227	ENST00000600026		H3BSH0	61 aa		18.78	■□□□□ 0.6
LTBP4-227	ENST00000600026	DHRS3	O75911	302 aa		18.78	■□□□□ 0.6
LTBP4-227	ENST00000600026	HLA-DPB1	P04440	258 aa		18.78	■□□□□ 0.6
LTBP4-227	ENST00000600026	CDKN1A	P38936	164 aa		18.78	■□□□□ 0.6
LTBP4-227	ENST00000600026	GSK3A	P49840	483 aa		18.78	■□□□□ 0.6
LTBP4-227	ENST00000600026	SNRPD2	P62316	118 aa	Known RBP	18.78	■□□□□ 0.6
LTBP4-227	ENST00000600026	FAM3A	P98173	230 aa		18.78	■□□□□ 0.6
LTBP4-227	ENST00000600026	MBNL2	Q5VZF2	373 aa	Known RBP	18.78	■□□□□ 0.6
LTBP4-227	ENST00000600026	OR13C3	Q8NGS6	347 aa		18.78	■□□□□ 0.6
LTBP4-227	ENST00000600026	TMEM203	Q969S6	136 aa		18.78	■□□□□ 0.6
LTBP4-227	ENST00000600026	TMIGD2	Q96BF3	282 aa		18.78	■□□□□ 0.6
LTBP4-227	ENST00000600026	HAVCR1	Q96D42	359 aa		18.78	■□□□□ 0.6
LTBP4-227	ENST00000600026	CACNG6	Q9BXT2	260 aa		18.78	■□□□□ 0.6
LTBP4-227	ENST00000600026	PLEKHA1	Q9HB21	404 aa		18.78	■□□□□ 0.6
LTBP4-227	ENST00000600026	SF3B6	Q9Y3B4	125 aa	Known RBP	18.78	■□□□□ 0.6
LTBP4-227	ENST00000600026	RGS9	O75916	674 aa	Predicted RBP	18.77	■□□□□ 0.6
LTBP4-227	ENST00000600026	CD2	P06729	351 aa		18.77	■□□□□ 0.6
LTBP4-227	ENST00000600026	OCM2	P0CE71	109 aa		18.77	■□□□□ 0.6
LTBP4-227	ENST00000600026	TGFBR2	P37173	567 aa		18.77	■□□□□ 0.6
LTBP4-227	ENST00000600026	DDOST	P39656	456 aa		18.77	■□□□□ 0.6
LTBP4-227	ENST00000600026	EVX1	P49640	407 aa		18.77	■□□□□ 0.6
LTBP4-227	ENST00000600026	KLF3	P57682	345 aa	Predicted RBP	18.77	■□□□□ 0.6
LTBP4-227	ENST00000600026	BLMH	Q13867	455 aa		18.77	■□□□□ 0.6
LTBP4-227	ENST00000600026		Q499Y3	187 aa		18.77	■□□□□ 0.6
LTBP4-227	ENST00000600026	TMEM255A	Q5JRV8	349 aa		18.77	■□□□□ 0.6
LTBP4-227	ENST00000600026	SEMA6D	Q8NFY4	1073 aa		18.77	■□□□□ 0.6
LTBP4-227	ENST00000600026	OR14K1	Q8NGZ2	314 aa		18.77	■□□□□ 0.6
LTBP4-227	ENST00000600026	OR10AC1	Q8NH08	325 aa		18.77	■□□□□ 0.6
LTBP4-227	ENST00000600026	RGP1	Q92546	391 aa	Predicted RBP	18.77	■□□□□ 0.6
LTBP4-227	ENST00000600026	YIPF6	Q96EC8	236 aa		18.77	■□□□□ 0.6
LTBP4-227	ENST00000600026		V9GYS6	101 aa		18.77	■□□□□ 0.6
LTBP4-227	ENST00000600026	TRBV5-5	A0A0J9YX44	114 aa		18.76	■□□□□ 0.59
LTBP4-227	ENST00000600026		A0A1W2PPW3	197 aa		18.76	■□□□□ 0.59
LTBP4-227	ENST00000600026	DHRS7C	A6NNS2	312 aa		18.76	■□□□□ 0.59

Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms