RNA–Protein interactions for RNA: ENST00000596814.5

VRK3-212, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,736 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-212ENST00000596814 SERPINA12Q8IW75 414 aa12.62□□□□□ -0.39
VRK3-212ENST00000596814 C1orf174Q8IYL3 243 aa12.62□□□□□ -0.39
VRK3-212ENST00000596814 LINC01560Q8TB33 94 aa12.62□□□□□ -0.39
VRK3-212ENST00000596814 C10orf35Q96D05 121 aa12.62□□□□□ -0.39
VRK3-212ENST00000596814 OR2J1Q9GZK6 312 aa12.62□□□□□ -0.39
VRK3-212ENST00000596814 SNTG1Q9NSN8 517 aa12.62□□□□□ -0.39
VRK3-212ENST00000596814 TAS2R4Q9NYW5 299 aa12.62□□□□□ -0.39
VRK3-212ENST00000596814 SPEF1Q9Y4P9 236 aa12.62□□□□□ -0.39
VRK3-212ENST00000596814 ANKHD1Q8IWZ3 2542 aaKnown RBP12.62□□□□□ -0.39
VRK3-212ENST00000596814 TRAV8-7A0A075B6U6 113 aa12.62□□□□□ -0.39
VRK3-212ENST00000596814 ANKRD61A6NGH8 418 aa12.62□□□□□ -0.39
VRK3-212ENST00000596814 A6NIN4 97 aa12.62□□□□□ -0.39
VRK3-212ENST00000596814 ATP6V1G2-DDX39BF2Z307 99 aa12.62□□□□□ -0.39
VRK3-212ENST00000596814 FAHP16930 419 aa12.62□□□□□ -0.39
VRK3-212ENST00000596814 ZNF182P17025 639 aaPredicted RBP12.62□□□□□ -0.39
VRK3-212ENST00000596814 THBS4P35443 961 aa12.62□□□□□ -0.39
VRK3-212ENST00000596814 RPS19P39019 145 aaKnown RBP12.62□□□□□ -0.39
VRK3-212ENST00000596814 BSPH1Q075Z2 132 aa12.62□□□□□ -0.39
VRK3-212ENST00000596814 RIPPLY1Q0D2K3 151 aa12.62□□□□□ -0.39
VRK3-212ENST00000596814 SNTB2Q13425 540 aaKnown RBP12.62□□□□□ -0.39
VRK3-212ENST00000596814 ASPHD2Q6ICH7 369 aa12.62□□□□□ -0.39
VRK3-212ENST00000596814 TPRA1Q86W33 373 aa12.62□□□□□ -0.39
VRK3-212ENST00000596814 SLC25A40Q8TBP6 338 aa12.62□□□□□ -0.39
VRK3-212ENST00000596814 DYNC2LI1Q8TCX1 351 aa12.62□□□□□ -0.39
VRK3-212ENST00000596814 FOXJ3Q9UPW0 622 aa12.62□□□□□ -0.39
VRK3-212ENST00000596814 CADP27708 2225 aa12.61□□□□□ -0.39
VRK3-212ENST00000596814 SMIM30A4D0T7 59 aa12.61□□□□□ -0.39
VRK3-212ENST00000596814 DPRXA6NFQ7 191 aa12.61□□□□□ -0.39
VRK3-212ENST00000596814 GGT3PA6NGU5 568 aa12.61□□□□□ -0.39
VRK3-212ENST00000596814 CLEC2LP0C7M8 214 aa12.61□□□□□ -0.39
VRK3-212ENST00000596814 IGFBP3P17936 291 aaPredicted RBP12.61□□□□□ -0.39
VRK3-212ENST00000596814 TUBG1P23258 451 aa12.61□□□□□ -0.39
VRK3-212ENST00000596814 PPP3R1P63098 170 aa12.61□□□□□ -0.39
VRK3-212ENST00000596814 TNK1Q13470 666 aa12.61□□□□□ -0.39
VRK3-212ENST00000596814 FBXW12Q6X9E4 464 aa12.61□□□□□ -0.39
VRK3-212ENST00000596814 PIAS4Q8N2W9 510 aaPredicted RBP12.61□□□□□ -0.39
VRK3-212ENST00000596814 OR56B2PQ8NGI1 322 aa12.61□□□□□ -0.39
VRK3-212ENST00000596814 OR5D14Q8NGL3 314 aa12.61□□□□□ -0.39
VRK3-212ENST00000596814 ITFG2Q969R8 447 aa12.61□□□□□ -0.39
VRK3-212ENST00000596814 RADILQ96JH8 1075 aa12.61□□□□□ -0.39
VRK3-212ENST00000596814 DACH2Q96NX9 599 aa12.61□□□□□ -0.39
VRK3-212ENST00000596814 TPK1Q9H3S4 243 aa12.61□□□□□ -0.39
VRK3-212ENST00000596814 ESRP2Q9H6T0 727 aaKnown RBP12.61□□□□□ -0.39
VRK3-212ENST00000596814 TUBG2Q9NRH3 451 aa12.61□□□□□ -0.39
VRK3-212ENST00000596814 ABCD4O14678 606 aa12.6□□□□□ -0.39
VRK3-212ENST00000596814 PDCD5O14737 125 aa12.6□□□□□ -0.39
VRK3-212ENST00000596814 RAB3BP20337 219 aa12.6□□□□□ -0.39
VRK3-212ENST00000596814 PEX19P40855 299 aa12.6□□□□□ -0.39
VRK3-212ENST00000596814 ZBTB37Q5TC79 503 aa12.6□□□□□ -0.39
VRK3-212ENST00000596814 OR13C9Q8NGT0 318 aa12.6□□□□□ -0.39
VRK3-212ENST00000596814 PP6455Q8WZ26 134 aa12.6□□□□□ -0.39
VRK3-212ENST00000596814 SLC25A46Q96AG3 418 aa12.6□□□□□ -0.39
VRK3-212ENST00000596814 CHST5Q9GZS9 411 aa12.6□□□□□ -0.39
VRK3-212ENST00000596814 ZCCHC4Q9H5U6 513 aa12.6□□□□□ -0.39
VRK3-212ENST00000596814 PTTG2Q9NZH5 202 aa12.6□□□□□ -0.39
VRK3-212ENST00000596814 CCDC59Q9P031 241 aaKnown RBP12.6□□□□□ -0.39
VRK3-212ENST00000596814 MYO18BQ8IUG5 2567 aa12.6□□□□□ -0.39
VRK3-212ENST00000596814 ZNF816-ZNF321PA0A0X1KG74 233 aa12.59□□□□□ -0.39
VRK3-212ENST00000596814 CD300LBA8K4G0 201 aa12.59□□□□□ -0.39
VRK3-212ENST00000596814 MAS1P04201 325 aa12.59□□□□□ -0.39
VRK3-212ENST00000596814 RAC2P15153 192 aa12.59□□□□□ -0.39
VRK3-212ENST00000596814 RAB3AP20336 220 aa12.59□□□□□ -0.39
VRK3-212ENST00000596814 SOX6P35712 828 aa12.59□□□□□ -0.39
VRK3-212ENST00000596814 DDOSTP39656 456 aa12.59□□□□□ -0.39
VRK3-212ENST00000596814 RPS23P62266 143 aaKnown RBP12.59□□□□□ -0.39
VRK3-212ENST00000596814 NKX6-1P78426 367 aaPredicted RBP12.59□□□□□ -0.39
VRK3-212ENST00000596814 HNRNPA0Q13151 305 aaKnown RBP12.59□□□□□ -0.39
VRK3-212ENST00000596814 CEP78Q5JTW2 689 aa12.59□□□□□ -0.39
VRK3-212ENST00000596814 NCMAPQ5T1S8 102 aa12.59□□□□□ -0.39
VRK3-212ENST00000596814 RGS7BPQ6MZT1 257 aaPredicted RBP12.59□□□□□ -0.39
VRK3-212ENST00000596814 LRRTM1Q86UE6 522 aa12.59□□□□□ -0.39
VRK3-212ENST00000596814 FTMTQ8N4E7 242 aa12.59□□□□□ -0.39
VRK3-212ENST00000596814 CSNK2A3Q8NEV1 391 aa12.59□□□□□ -0.39
VRK3-212ENST00000596814 OR51A2Q8NGJ7 313 aa12.59□□□□□ -0.39
VRK3-212ENST00000596814 KLF14Q8TD94 323 aaPredicted RBP12.59□□□□□ -0.39
VRK3-212ENST00000596814 CMBLQ96DG6 245 aa12.59□□□□□ -0.39
VRK3-212ENST00000596814 PLPPR2Q96GM1 343 aa12.59□□□□□ -0.39
VRK3-212ENST00000596814 MARS2Q96GW9 593 aaKnown RBP12.59□□□□□ -0.39
VRK3-212ENST00000596814 AK6Q9Y3D8 172 aaKnown RBP12.59□□□□□ -0.39
VRK3-212ENST00000596814 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.59□□□□□ -0.39
VRK3-212ENST00000596814 ANXA2P2A6NMY6 339 aa12.59□□□□□ -0.39
VRK3-212ENST00000596814 SULT1B1O43704 296 aa12.59□□□□□ -0.39
VRK3-212ENST00000596814 NCR1O76036 304 aa12.59□□□□□ -0.39
VRK3-212ENST00000596814 SELEP16581 610 aa12.59□□□□□ -0.39
VRK3-212ENST00000596814 ADRA2CP18825 462 aa12.59□□□□□ -0.39
VRK3-212ENST00000596814 GLRXP35754 106 aa12.59□□□□□ -0.39
VRK3-212ENST00000596814 CAV3P56539 151 aa12.59□□□□□ -0.39
VRK3-212ENST00000596814 OR10A3P58181 314 aa12.59□□□□□ -0.39
VRK3-212ENST00000596814 DGUOKQ16854 277 aa12.59□□□□□ -0.39
VRK3-212ENST00000596814 ZNF718Q3SXZ3 478 aa12.59□□□□□ -0.39
VRK3-212ENST00000596814 BEX5Q5H9J7 111 aa12.59□□□□□ -0.39
VRK3-212ENST00000596814 OR2T2Q6IF00 324 aa12.59□□□□□ -0.39
VRK3-212ENST00000596814 ZNF529Q6P280 563 aa12.59□□□□□ -0.39
VRK3-212ENST00000596814 SLC22A25Q6T423 547 aa12.59□□□□□ -0.39
VRK3-212ENST00000596814 UTS2BQ765I0 119 aa12.59□□□□□ -0.39
VRK3-212ENST00000596814 NUP37Q8NFH4 326 aa12.59□□□□□ -0.39
VRK3-212ENST00000596814 OR1M1Q8NGA1 313 aa12.59□□□□□ -0.39
VRK3-212ENST00000596814 KCNN3Q9UGI6 736 aa12.59□□□□□ -0.39
VRK3-212ENST00000596814 ADGRG4Q8IZF6 3080 aa12.59□□□□□ -0.39
VRK3-212ENST00000596814 GCH1P30793 250 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms