RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 FAM89BQ8N5H3 189 aa11.72□□□□□ -0.53
VRK3-209ENST00000594948 OR2I1PQ8NGU4 316 aa11.72□□□□□ -0.53
VRK3-209ENST00000594948 RNF138Q8WVD3 245 aa11.72□□□□□ -0.53
VRK3-209ENST00000594948 EMG1Q92979 244 aaKnown RBP11.72□□□□□ -0.53
VRK3-209ENST00000594948 MRPL38Q96DV4 380 aaKnown RBP11.72□□□□□ -0.53
VRK3-209ENST00000594948 TMEM41AQ96HV5 264 aa11.72□□□□□ -0.53
VRK3-209ENST00000594948 OR5B2Q96R09 309 aa11.72□□□□□ -0.53
VRK3-209ENST00000594948 C12orf57Q99622 126 aa11.72□□□□□ -0.53
VRK3-209ENST00000594948 MICU1Q9BPX6 476 aa11.72□□□□□ -0.53
VRK3-209ENST00000594948 ADAT1Q9BUB4 502 aaKnown RBP11.72□□□□□ -0.53
VRK3-209ENST00000594948 TMEM106CQ9BVX2 250 aa11.72□□□□□ -0.53
VRK3-209ENST00000594948 PARP11Q9NR21 331 aa11.72□□□□□ -0.53
VRK3-209ENST00000594948 OR5AC2Q9NZP5 309 aa11.72□□□□□ -0.53
VRK3-209ENST00000594948 FBXO9Q9UK97 447 aaPredicted RBP11.72□□□□□ -0.53
VRK3-209ENST00000594948 CYP8B1Q9UNU6 501 aa11.72□□□□□ -0.53
VRK3-209ENST00000594948 RPH3AQ9Y2J0 694 aaPredicted RBP11.72□□□□□ -0.53
VRK3-209ENST00000594948 ADAMTS20P59510 1910 aa11.72□□□□□ -0.53
VRK3-209ENST00000594948 SOCS1O15524 211 aa11.72□□□□□ -0.53
VRK3-209ENST00000594948 FBXO24O75426 580 aa11.72□□□□□ -0.53
VRK3-209ENST00000594948 GAPDHP04406 335 aaKnown RBP11.72□□□□□ -0.53
VRK3-209ENST00000594948 CD5P06127 495 aa11.72□□□□□ -0.53
VRK3-209ENST00000594948 RPS2P15880 293 aaKnown RBP11.72□□□□□ -0.53
VRK3-209ENST00000594948 ALDH3B1P43353 468 aa11.72□□□□□ -0.53
VRK3-209ENST00000594948 NPY4RP50391 375 aa11.72□□□□□ -0.53
VRK3-209ENST00000594948 ZNF84P51523 738 aa11.72□□□□□ -0.53
VRK3-209ENST00000594948 AKR1D1P51857 326 aa11.72□□□□□ -0.53
VRK3-209ENST00000594948 BIDP55957 195 aa11.72□□□□□ -0.53
VRK3-209ENST00000594948 PDZK1IP1Q13113 114 aa11.72□□□□□ -0.53
VRK3-209ENST00000594948 PPA1Q15181 289 aa11.72□□□□□ -0.53
VRK3-209ENST00000594948 SLC9A3R2Q15599 337 aa11.72□□□□□ -0.53
VRK3-209ENST00000594948 HMGN3Q15651 99 aa11.72□□□□□ -0.53
VRK3-209ENST00000594948 KCNMB1Q16558 191 aa11.72□□□□□ -0.53
VRK3-209ENST00000594948 ANKRD55Q3KP44 614 aa11.72□□□□□ -0.53
VRK3-209ENST00000594948 SLC25A53Q5H9E4 307 aa11.72□□□□□ -0.53
VRK3-209ENST00000594948 RTL6Q6ICC9 239 aa11.72□□□□□ -0.53
VRK3-209ENST00000594948 OGFOD3Q6PK18 319 aa11.72□□□□□ -0.53
VRK3-209ENST00000594948 BTNL8Q6UX41 500 aa11.72□□□□□ -0.53
VRK3-209ENST00000594948 DOK3Q7L591 496 aa11.72□□□□□ -0.53
VRK3-209ENST00000594948 OR13G1Q8NGZ3 307 aa11.72□□□□□ -0.53
VRK3-209ENST00000594948 OR51E1Q8TCB6 317 aa11.72□□□□□ -0.53
VRK3-209ENST00000594948 ARL5BQ96KC2 179 aa11.72□□□□□ -0.53
VRK3-209ENST00000594948 C5orf34Q96MH7 638 aa11.72□□□□□ -0.53
VRK3-209ENST00000594948 EGLN1Q9GZT9 426 aa11.72□□□□□ -0.53
VRK3-209ENST00000594948 SEC61A2Q9H9S3 476 aa11.72□□□□□ -0.53
VRK3-209ENST00000594948 SLC2A4RGQ9NR83 387 aa11.72□□□□□ -0.53
VRK3-209ENST00000594948 SERINC1Q9NRX5 453 aa11.72□□□□□ -0.53
VRK3-209ENST00000594948 MED29Q9NX70 200 aa11.72□□□□□ -0.53
VRK3-209ENST00000594948 ASH2LQ9UBL3 628 aa11.72□□□□□ -0.53
VRK3-209ENST00000594948 CD207Q9UJ71 328 aa11.72□□□□□ -0.53
VRK3-209ENST00000594948 FOXI3A8MTJ6 420 aaPredicted RBP11.71□□□□□ -0.54
VRK3-209ENST00000594948 RNASEK-C17orf49H0YIS7 233 aa11.71□□□□□ -0.54
VRK3-209ENST00000594948 KCNAB3O43448 404 aa11.71□□□□□ -0.54
VRK3-209ENST00000594948 ADAP1O75689 374 aa11.71□□□□□ -0.54
VRK3-209ENST00000594948 CST4P01036 141 aa11.71□□□□□ -0.54
VRK3-209ENST00000594948 MUC1P15941 1255 aaPredicted RBP11.71□□□□□ -0.54
VRK3-209ENST00000594948 AMY2BP19961 511 aa11.71□□□□□ -0.54
VRK3-209ENST00000594948 HTRA3P83110 453 aa11.71□□□□□ -0.54
VRK3-209ENST00000594948 AADACL3Q5VUY0 350 aa11.71□□□□□ -0.54
VRK3-209ENST00000594948 C7orf61Q8IZ16 206 aa11.71□□□□□ -0.54
VRK3-209ENST00000594948 TMEM104Q8NE00 496 aa11.71□□□□□ -0.54
VRK3-209ENST00000594948 NOXO1Q8NFA2 376 aa11.71□□□□□ -0.54
VRK3-209ENST00000594948 OR2AJ1Q8NGZ0 328 aa11.71□□□□□ -0.54
VRK3-209ENST00000594948 LMX1AQ8TE12 382 aa11.71□□□□□ -0.54
VRK3-209ENST00000594948 VN1R1Q9GZP7 353 aa11.71□□□□□ -0.54
VRK3-209ENST00000594948 METTL8Q9H825 291 aaKnown RBP11.71□□□□□ -0.54
VRK3-209ENST00000594948 CLEC1BQ9P126 229 aa11.71□□□□□ -0.54
VRK3-209ENST00000594948 LHFPL6Q9Y693 200 aa11.71□□□□□ -0.54
VRK3-209ENST00000594948 CHD9Q3L8U1 2897 aa11.71□□□□□ -0.54
VRK3-209ENST00000594948 FER1L5A0AVI2 2057 aa11.7□□□□□ -0.54
VRK3-209ENST00000594948 MEX3AA1L020 520 aaKnown RBP11.7□□□□□ -0.54
VRK3-209ENST00000594948 VSTM2BA6NLU5 285 aa11.7□□□□□ -0.54
VRK3-209ENST00000594948 RAD51DO75771 328 aa11.7□□□□□ -0.54
VRK3-209ENST00000594948 CRYBA1P05813 215 aa11.7□□□□□ -0.54
VRK3-209ENST00000594948 FCGR3AP08637 254 aa11.7□□□□□ -0.54
VRK3-209ENST00000594948 PRF1P14222 555 aa11.7□□□□□ -0.54
VRK3-209ENST00000594948 FOSL2P15408 326 aa11.7□□□□□ -0.54
VRK3-209ENST00000594948 BCKDHBP21953 392 aa11.7□□□□□ -0.54
VRK3-209ENST00000594948 ADH6P28332 368 aa11.7□□□□□ -0.54
VRK3-209ENST00000594948 MSX1P28360 303 aa11.7□□□□□ -0.54
VRK3-209ENST00000594948 OR3A4PP47883 348 aa11.7□□□□□ -0.54
VRK3-209ENST00000594948 OR3A2P47893 321 aa11.7□□□□□ -0.54
VRK3-209ENST00000594948 PPM1FP49593 454 aaPredicted RBP11.7□□□□□ -0.54
VRK3-209ENST00000594948 MEOX2P50222 304 aa11.7□□□□□ -0.54
VRK3-209ENST00000594948 RNF4P78317 190 aa11.7□□□□□ -0.54
VRK3-209ENST00000594948 RAB32Q13637 225 aa11.7□□□□□ -0.54
VRK3-209ENST00000594948 TSC22D1Q15714 1073 aa11.7□□□□□ -0.54
VRK3-209ENST00000594948 TMEM268Q5VZI3 342 aa11.7□□□□□ -0.54
VRK3-209ENST00000594948 C15orf54Q8N8G6 183 aa11.7□□□□□ -0.54
VRK3-209ENST00000594948 OR8B12Q8NGG6 310 aa11.7□□□□□ -0.54
VRK3-209ENST00000594948 OR1L3Q8NH93 324 aa11.7□□□□□ -0.54
VRK3-209ENST00000594948 RXFP4Q8TDU9 374 aa11.7□□□□□ -0.54
VRK3-209ENST00000594948 ZNF775Q96BV0 537 aaPredicted RBP11.7□□□□□ -0.54
VRK3-209ENST00000594948 OR10C1Q96KK4 312 aa11.7□□□□□ -0.54
VRK3-209ENST00000594948 OR10A2Q9H208 303 aa11.7□□□□□ -0.54
VRK3-209ENST00000594948 ZNF768Q9H5H4 540 aaKnown RBP11.7□□□□□ -0.54
VRK3-209ENST00000594948 TAF9BQ9HBM6 251 aa11.7□□□□□ -0.54
VRK3-209ENST00000594948 SMCO4Q9NRQ5 59 aa11.7□□□□□ -0.54
VRK3-209ENST00000594948 DHCR7Q9UBM7 475 aaKnown RBP11.7□□□□□ -0.54
VRK3-209ENST00000594948 ZNF354AO60765 605 aaPredicted RBP11.7□□□□□ -0.54
VRK3-209ENST00000594948 GIMD1P0DJR0 217 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms