RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 IDH3GP51553 393 aaPredicted RBP13.15□□□□□ -0.3
VRK3-207ENST00000594092 NKAIN3Q8N8D7 197 aa13.15□□□□□ -0.3
VRK3-207ENST00000594092 RELL2Q8NC24 303 aaPredicted RBP13.15□□□□□ -0.3
VRK3-207ENST00000594092 CCDC54Q8NEL0 328 aa13.15□□□□□ -0.3
VRK3-207ENST00000594092 OR51A2Q8NGJ7 313 aa13.15□□□□□ -0.3
VRK3-207ENST00000594092 OR5D14Q8NGL3 314 aa13.15□□□□□ -0.3
VRK3-207ENST00000594092 CHPT1Q8WUD6 406 aa13.15□□□□□ -0.3
VRK3-207ENST00000594092 PPP1R3EQ9H7J1 279 aa13.15□□□□□ -0.3
VRK3-207ENST00000594092 PLEKHA1Q9HB21 404 aa13.15□□□□□ -0.3
VRK3-207ENST00000594092 OBP2BQ9NPH6 170 aa13.15□□□□□ -0.3
VRK3-207ENST00000594092 C14orf119Q9NWQ9 140 aa13.15□□□□□ -0.3
VRK3-207ENST00000594092 ZNF391Q9UJN7 358 aa13.15□□□□□ -0.3
VRK3-207ENST00000594092 OSGIN2Q9Y236 505 aa13.15□□□□□ -0.3
VRK3-207ENST00000594092 ETV7Q9Y603 341 aa13.15□□□□□ -0.3
VRK3-207ENST00000594092 A0A1B0GVG6 124 aa13.14□□□□□ -0.31
VRK3-207ENST00000594092 LOC390937A0A1W2PQ73 354 aa13.14□□□□□ -0.31
VRK3-207ENST00000594092 IGKV3-15P01624 115 aa13.14□□□□□ -0.31
VRK3-207ENST00000594092 DDOSTP39656 456 aa13.14□□□□□ -0.31
VRK3-207ENST00000594092 WNT5AP41221 380 aa13.14□□□□□ -0.31
VRK3-207ENST00000594092 CLDN12P56749 244 aa13.14□□□□□ -0.31
VRK3-207ENST00000594092 SCAND1P57086 179 aa13.14□□□□□ -0.31
VRK3-207ENST00000594092 DEFA1P59665 94 aa13.14□□□□□ -0.31
VRK3-207ENST00000594092 DEFA3P59666 94 aa13.14□□□□□ -0.31
VRK3-207ENST00000594092 MADCAM1Q13477 382 aa13.14□□□□□ -0.31
VRK3-207ENST00000594092 RIN1Q13671 783 aa13.14□□□□□ -0.31
VRK3-207ENST00000594092 OR4M1Q8NGD0 313 aa13.14□□□□□ -0.31
VRK3-207ENST00000594092 CNTNAP3BQ96NU0 1288 aa13.14□□□□□ -0.31
VRK3-207ENST00000594092 CNTNAP3Q9BZ76 1288 aa13.14□□□□□ -0.31
VRK3-207ENST00000594092 RGCCQ9H4X1 137 aa13.14□□□□□ -0.31
VRK3-207ENST00000594092 JKAMPQ9P055 326 aa13.14□□□□□ -0.31
VRK3-207ENST00000594092 COL6A6A6NMZ7 2263 aa13.14□□□□□ -0.31
VRK3-207ENST00000594092 SLC17A2O00624 439 aa13.13□□□□□ -0.31
VRK3-207ENST00000594092 XRCC2O43543 280 aa13.13□□□□□ -0.31
VRK3-207ENST00000594092 MTRF1O75570 445 aaKnown RBP13.13□□□□□ -0.31
VRK3-207ENST00000594092 NGFP01138 241 aa13.13□□□□□ -0.31
VRK3-207ENST00000594092 ZNF92Q03936 586 aa13.13□□□□□ -0.31
VRK3-207ENST00000594092 SPOCK1Q08629 439 aa13.13□□□□□ -0.31
VRK3-207ENST00000594092 P2RY14Q15391 338 aa13.13□□□□□ -0.31
VRK3-207ENST00000594092 RAB11BQ15907 218 aa13.13□□□□□ -0.31
VRK3-207ENST00000594092 TBC1D28Q2M2D7 210 aa13.13□□□□□ -0.31
VRK3-207ENST00000594092 TRIM16LQ309B1 348 aa13.13□□□□□ -0.31
VRK3-207ENST00000594092 ZNF529Q6P280 563 aa13.13□□□□□ -0.31
VRK3-207ENST00000594092 MINDY2Q8NBR6 621 aa13.13□□□□□ -0.31
VRK3-207ENST00000594092 AKAP1Q92667 903 aaKnown RBP eCLIP13.13□□□□□ -0.31
VRK3-207ENST00000594092 SPSB4Q96A44 273 aa13.13□□□□□ -0.31
VRK3-207ENST00000594092 APOBEC3DQ96AK3 386 aaPredicted RBP13.13□□□□□ -0.31
VRK3-207ENST00000594092 S100PBPQ96BU1 408 aa13.13□□□□□ -0.31
VRK3-207ENST00000594092 FOXRED1Q96CU9 486 aaPredicted RBP13.13□□□□□ -0.31
VRK3-207ENST00000594092 C1QTNF6Q9BXI9 259 aa13.13□□□□□ -0.31
VRK3-207ENST00000594092 OR5V1Q9UGF6 321 aa13.13□□□□□ -0.31
VRK3-207ENST00000594092 AMDHD2Q9Y303 409 aa13.13□□□□□ -0.31
VRK3-207ENST00000594092 SLC25A15Q9Y619 301 aa13.13□□□□□ -0.31
VRK3-207ENST00000594092 PCNX1Q96RV3 2341 aa13.13□□□□□ -0.31
VRK3-207ENST00000594092 DHRS7CA6NNS2 312 aa13.13□□□□□ -0.31
VRK3-207ENST00000594092 IL7P13232 177 aa13.13□□□□□ -0.31
VRK3-207ENST00000594092 RAB3AP20336 220 aa13.13□□□□□ -0.31
VRK3-207ENST00000594092 ACKR3P25106 362 aa13.13□□□□□ -0.31
VRK3-207ENST00000594092 BDKRB2P30411 391 aa13.13□□□□□ -0.31
VRK3-207ENST00000594092 PITPNBP48739 271 aa13.13□□□□□ -0.31
VRK3-207ENST00000594092 FAM27E3Q08E93 113 aa13.13□□□□□ -0.31
VRK3-207ENST00000594092 TNK1Q13470 666 aa13.13□□□□□ -0.31
VRK3-207ENST00000594092 BAK1Q16611 211 aa13.13□□□□□ -0.31
VRK3-207ENST00000594092 TIMM23BQ5SRD1 257 aa13.13□□□□□ -0.31
VRK3-207ENST00000594092 BAIAP2L2Q6UXY1 529 aa13.13□□□□□ -0.31
VRK3-207ENST00000594092 DCDC5Q6ZRR9 648 aa13.13□□□□□ -0.31
VRK3-207ENST00000594092 PGAP1Q75T13 922 aa13.13□□□□□ -0.31
VRK3-207ENST00000594092 ZNF101Q8IZC7 436 aa13.13□□□□□ -0.31
VRK3-207ENST00000594092 CENPSQ8N2Z9 138 aa13.13□□□□□ -0.31
VRK3-207ENST00000594092 OR1M1Q8NGA1 313 aa13.13□□□□□ -0.31
VRK3-207ENST00000594092 PIGLQ9Y2B2 252 aa13.13□□□□□ -0.31
VRK3-207ENST00000594092 STARD10Q9Y365 291 aa13.13□□□□□ -0.31
VRK3-207ENST00000594092 PRR14LQ5THK1 2151 aa13.13□□□□□ -0.31
VRK3-207ENST00000594092 hCG_38984A0A1B0GV85 526 aa13.12□□□□□ -0.31
VRK3-207ENST00000594092 ERCC1P07992 297 aaPredicted RBP13.12□□□□□ -0.31
VRK3-207ENST00000594092 FAHP16930 419 aa13.12□□□□□ -0.31
VRK3-207ENST00000594092 THBS4P35443 961 aa13.12□□□□□ -0.31
VRK3-207ENST00000594092 GSK3AP49840 483 aa13.12□□□□□ -0.31
VRK3-207ENST00000594092 PRSS12P56730 875 aa13.12□□□□□ -0.31
VRK3-207ENST00000594092 FAM3AP98173 230 aa13.12□□□□□ -0.31
VRK3-207ENST00000594092 MRPL49Q13405 166 aaKnown RBP13.12□□□□□ -0.31
VRK3-207ENST00000594092 ST3GAL2Q16842 350 aa13.12□□□□□ -0.31
VRK3-207ENST00000594092 Q8N402 240 aa13.12□□□□□ -0.31
VRK3-207ENST00000594092 POC5Q8NA72 575 aa13.12□□□□□ -0.31
VRK3-207ENST00000594092 SEMA6DQ8NFY4 1073 aa13.12□□□□□ -0.31
VRK3-207ENST00000594092 OR6M1Q8NGM8 313 aa13.12□□□□□ -0.31
VRK3-207ENST00000594092 OR13C9Q8NGT0 318 aa13.12□□□□□ -0.31
VRK3-207ENST00000594092 C10orf35Q96D05 121 aa13.12□□□□□ -0.31
VRK3-207ENST00000594092 TMEM138Q9NPI0 162 aa13.12□□□□□ -0.31
VRK3-207ENST00000594092 NBASA2RRP1 2371 aa13.12□□□□□ -0.31
VRK3-207ENST00000594092 KALRNO60229 2985 aa13.12□□□□□ -0.31
VRK3-207ENST00000594092 MYO7BQ6PIF6 2116 aa13.12□□□□□ -0.31
VRK3-207ENST00000594092 A0A0G2JMP0 313 aa13.11□□□□□ -0.31
VRK3-207ENST00000594092 A0A0X1KG70 313 aa13.11□□□□□ -0.31
VRK3-207ENST00000594092 CCL21O00585 134 aa13.11□□□□□ -0.31
VRK3-207ENST00000594092 SULT1B1O43704 296 aa13.11□□□□□ -0.31
VRK3-207ENST00000594092 IGLV1-44P01699 117 aa13.11□□□□□ -0.31
VRK3-207ENST00000594092 CSF3P09919 207 aa13.11□□□□□ -0.31
VRK3-207ENST00000594092 CD37P11049 281 aa13.11□□□□□ -0.31
VRK3-207ENST00000594092 HTR2CP28335 458 aa13.11□□□□□ -0.31
VRK3-207ENST00000594092 NR4A2P43354 598 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms