RNA–Protein interactions for RNA: ENST00000594090.5

VRK3-206, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best)

Gene VRK3, Length 1,448 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-206ENST00000594090 MOGAT3Q86VF5 341 aa12.28□□□□□ -0.44
VRK3-206ENST00000594090 KLBQ86Z14 1044 aa12.28□□□□□ -0.44
VRK3-206ENST00000594090 PACRGLQ8N7B6 248 aa12.28□□□□□ -0.44
VRK3-206ENST00000594090 RNFT2Q96EX2 444 aa12.28□□□□□ -0.44
VRK3-206ENST00000594090 PBOV1Q9GZY1 135 aa12.28□□□□□ -0.44
VRK3-206ENST00000594090 MOB1AQ9H8S9 216 aa12.28□□□□□ -0.44
VRK3-206ENST00000594090 NUFIP1Q9UHK0 495 aaKnown RBP12.28□□□□□ -0.44
VRK3-206ENST00000594090 CSPG4Q6UVK1 2322 aa12.27□□□□□ -0.44
VRK3-206ENST00000594090 LOC100289279A0A1B0GTE1 492 aa12.27□□□□□ -0.45
VRK3-206ENST00000594090 ISPDA4D126 451 aa12.27□□□□□ -0.45
VRK3-206ENST00000594090 TMEM178BH3BS89 294 aa12.27□□□□□ -0.45
VRK3-206ENST00000594090 PNPP00491 289 aa12.27□□□□□ -0.45
VRK3-206ENST00000594090 IGHV2-5P01817 119 aa12.27□□□□□ -0.45
VRK3-206ENST00000594090 KRT8P05787 483 aa12.27□□□□□ -0.45
VRK3-206ENST00000594090 HOXB4P17483 251 aaPredicted RBP12.27□□□□□ -0.45
VRK3-206ENST00000594090 ACKR3P25106 362 aa12.27□□□□□ -0.45
VRK3-206ENST00000594090 ELF3P78545 371 aaPredicted RBP12.27□□□□□ -0.45
VRK3-206ENST00000594090 SNCBQ16143 134 aa12.27□□□□□ -0.45
VRK3-206ENST00000594090 ZNF684Q5T5D7 378 aa12.27□□□□□ -0.45
VRK3-206ENST00000594090 PRAMEF6Q5VXH4 476 aa12.27□□□□□ -0.45
VRK3-206ENST00000594090 LINC01356Q8N9X3 169 aa12.27□□□□□ -0.45
VRK3-206ENST00000594090 SPERTQ8NA61 448 aa12.27□□□□□ -0.45
VRK3-206ENST00000594090 ZNF555Q8NEP9 628 aa12.27□□□□□ -0.45
VRK3-206ENST00000594090 CSNK2A3Q8NEV1 391 aa12.27□□□□□ -0.45
VRK3-206ENST00000594090 RHOXF1Q8NHV9 184 aa12.27□□□□□ -0.45
VRK3-206ENST00000594090 RAB39BQ96DA2 213 aa12.27□□□□□ -0.45
VRK3-206ENST00000594090 GAL3ST1Q99999 423 aa12.27□□□□□ -0.45
VRK3-206ENST00000594090 ZNF665Q9H7R5 613 aa12.27□□□□□ -0.45
VRK3-206ENST00000594090 DCLRE1BQ9H816 532 aa12.27□□□□□ -0.45
VRK3-206ENST00000594090 R4GMQ9 66 aa12.27□□□□□ -0.45
VRK3-206ENST00000594090 MTORP42345 2549 aa12.26□□□□□ -0.45
VRK3-206ENST00000594090 ABCA2Q9BZC7 2435 aa12.26□□□□□ -0.45
VRK3-206ENST00000594090 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.26□□□□□ -0.45
VRK3-206ENST00000594090 SNTNA6NMZ2 147 aa12.26□□□□□ -0.45
VRK3-206ENST00000594090 FAM157AC9JC47 383 aa12.26□□□□□ -0.45
VRK3-206ENST00000594090 J3QRE1 110 aa12.26□□□□□ -0.45
VRK3-206ENST00000594090 CASQ2O14958 399 aaPredicted RBP12.26□□□□□ -0.45
VRK3-206ENST00000594090 LMX1BO60663 402 aa12.26□□□□□ -0.45
VRK3-206ENST00000594090 PTBP3O95758 552 aaKnown RBP12.26□□□□□ -0.45
VRK3-206ENST00000594090 CYB5R3P00387 301 aaPredicted RBP12.26□□□□□ -0.45
VRK3-206ENST00000594090 TGFAP01135 160 aa12.26□□□□□ -0.45
VRK3-206ENST00000594090 IGLV3-1P01715 115 aa12.26□□□□□ -0.45
VRK3-206ENST00000594090 TTRP02766 147 aa12.26□□□□□ -0.45
VRK3-206ENST00000594090 DBTP11182 482 aaKnown RBP12.26□□□□□ -0.45
VRK3-206ENST00000594090 PMELP40967 661 aa12.26□□□□□ -0.45
VRK3-206ENST00000594090 BTG1P62324 171 aa12.26□□□□□ -0.45
VRK3-206ENST00000594090 ACTC1P68032 377 aa12.26□□□□□ -0.45
VRK3-206ENST00000594090 ACTA1P68133 377 aa12.26□□□□□ -0.45
VRK3-206ENST00000594090 ZNF85Q03923 595 aa12.26□□□□□ -0.45
VRK3-206ENST00000594090 ZNF91Q05481 1191 aa12.26□□□□□ -0.45
VRK3-206ENST00000594090 MPPED2Q15777 294 aa12.26□□□□□ -0.45
VRK3-206ENST00000594090 OGFRL1Q5TC84 451 aaPredicted RBP12.26□□□□□ -0.45
VRK3-206ENST00000594090 FTMTQ8N4E7 242 aa12.26□□□□□ -0.45
VRK3-206ENST00000594090 YIPF7Q8N8F6 280 aa12.26□□□□□ -0.45
VRK3-206ENST00000594090 Q8TCH9 128 aa12.26□□□□□ -0.45
VRK3-206ENST00000594090 ERGIC1Q969X5 290 aa12.26□□□□□ -0.45
VRK3-206ENST00000594090 PPP1R14AQ96A00 147 aa12.26□□□□□ -0.45
VRK3-206ENST00000594090 PAPOLGQ9BWT3 736 aaKnown RBP12.26□□□□□ -0.45
VRK3-206ENST00000594090 G6PC2Q9NQR9 355 aa12.26□□□□□ -0.45
VRK3-206ENST00000594090 GPR84Q9NQS5 396 aa12.26□□□□□ -0.45
VRK3-206ENST00000594090 KCNS2Q9ULS6 477 aa12.26□□□□□ -0.45
VRK3-206ENST00000594090 GTF2A1LQ9UNN4 478 aa12.26□□□□□ -0.45
VRK3-206ENST00000594090 RHBDD3Q9Y3P4 386 aa12.26□□□□□ -0.45
VRK3-206ENST00000594090 METTL15A6NJ78 407 aa12.25□□□□□ -0.45
VRK3-206ENST00000594090 LRRC30A6NM36 301 aa12.25□□□□□ -0.45
VRK3-206ENST00000594090 B4DSR2 109 aa12.25□□□□□ -0.45
VRK3-206ENST00000594090 SULT1C4O75897 302 aa12.25□□□□□ -0.45
VRK3-206ENST00000594090 RPP14O95059 124 aaKnown RBP12.25□□□□□ -0.45
VRK3-206ENST00000594090 GNALP38405 381 aa12.25□□□□□ -0.45
VRK3-206ENST00000594090 MZT1Q08AG7 82 aa12.25□□□□□ -0.45
VRK3-206ENST00000594090 ZMYND11Q15326 602 aa12.25□□□□□ -0.45
VRK3-206ENST00000594090 BCL2L15Q5TBC7 163 aa12.25□□□□□ -0.45
VRK3-206ENST00000594090 LIPNQ5VXI9 398 aa12.25□□□□□ -0.45
VRK3-206ENST00000594090 ZNF771Q7L3S4 317 aaPredicted RBP12.25□□□□□ -0.45
VRK3-206ENST00000594090 COMMD2Q86X83 199 aa12.25□□□□□ -0.45
VRK3-206ENST00000594090 C1orf87Q8N0U7 546 aa12.25□□□□□ -0.45
VRK3-206ENST00000594090 PLPP7Q8NBV4 271 aa12.25□□□□□ -0.45
VRK3-206ENST00000594090 OR8S1Q8NH09 359 aa12.25□□□□□ -0.45
VRK3-206ENST00000594090 OR51E1Q8TCB6 317 aa12.25□□□□□ -0.45
VRK3-206ENST00000594090 APH1BQ8WW43 257 aa12.25□□□□□ -0.45
VRK3-206ENST00000594090 FAM71F1Q96KD3 344 aaPredicted RBP12.25□□□□□ -0.45
VRK3-206ENST00000594090 Q96MT0 163 aa12.25□□□□□ -0.45
VRK3-206ENST00000594090 PPP1R3EQ9H7J1 279 aa12.25□□□□□ -0.45
VRK3-206ENST00000594090 FN3KRPQ9HA64 309 aa12.25□□□□□ -0.45
VRK3-206ENST00000594090 UFSP2Q9NUQ7 469 aa12.25□□□□□ -0.45
VRK3-206ENST00000594090 C14orf119Q9NWQ9 140 aa12.25□□□□□ -0.45
VRK3-206ENST00000594090 OR52A1Q9UKL2 312 aa12.25□□□□□ -0.45
VRK3-206ENST00000594090 EXOGQ9Y2C4 368 aaKnown RBP12.25□□□□□ -0.45
VRK3-206ENST00000594090 SNX5Q9Y5X3 404 aa12.25□□□□□ -0.45
VRK3-206ENST00000594090 FN1P02751 2386 aaKnown RBP12.25□□□□□ -0.45
VRK3-206ENST00000594090 HIVEP2P31629 2446 aa12.24□□□□□ -0.45
VRK3-206ENST00000594090 FAM20BO75063 409 aa12.24□□□□□ -0.45
VRK3-206ENST00000594090 CRLF1O75462 422 aa12.24□□□□□ -0.45
VRK3-206ENST00000594090 CLIC3O95833 236 aa12.24□□□□□ -0.45
VRK3-206ENST00000594090 CST4P01036 141 aa12.24□□□□□ -0.45
VRK3-206ENST00000594090 IRF2P14316 349 aa12.24□□□□□ -0.45
VRK3-206ENST00000594090 MDH2P40926 338 aaKnown RBP12.24□□□□□ -0.45
VRK3-206ENST00000594090 MAP2K3P46734 347 aa12.24□□□□□ -0.45
VRK3-206ENST00000594090 IL5RAQ01344 420 aa12.24□□□□□ -0.45
VRK3-206ENST00000594090 TMEM155Q4W5P6 130 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms