RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 GABARAPL3Q9BY60 117 aa22.83■■□□□ 1.25
SMAD4-213ENST00000591914 FN3KRPQ9HA64 309 aa22.83■■□□□ 1.25
SMAD4-213ENST00000591914 UFSP2Q9NUQ7 469 aa22.83■■□□□ 1.25
SMAD4-213ENST00000591914 ARHGAP32A7KAX9 2087 aa22.83■■□□□ 1.24
SMAD4-213ENST00000591914 WNK2Q9Y3S1 2297 aa22.82■■□□□ 1.24
SMAD4-213ENST00000591914 ANKRD30BLA7E2S9 258 aa22.82■■□□□ 1.24
SMAD4-213ENST00000591914 A8MXK9 166 aa22.82■■□□□ 1.24
SMAD4-213ENST00000591914 H3BNX3 289 aa22.82■■□□□ 1.24
SMAD4-213ENST00000591914 GFOD2Q3B7J2 385 aa22.82■■□□□ 1.24
SMAD4-213ENST00000591914 ZNF404Q494X3 552 aa22.82■■□□□ 1.24
SMAD4-213ENST00000591914 FAM201AQ5SY85 155 aa22.82■■□□□ 1.24
SMAD4-213ENST00000591914 KCTD18Q6PI47 426 aaPredicted RBP22.82■■□□□ 1.24
SMAD4-213ENST00000591914 CNN2Q99439 309 aaKnown RBP22.82■■□□□ 1.24
SMAD4-213ENST00000591914 TMEM246Q9BRR3 403 aa22.82■■□□□ 1.24
SMAD4-213ENST00000591914 PPIAL4AQ9Y536 164 aa22.82■■□□□ 1.24
SMAD4-213ENST00000591914 TMEM14AQ9Y6G1 99 aa22.82■■□□□ 1.24
SMAD4-213ENST00000591914 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP22.81■■□□□ 1.24
SMAD4-213ENST00000591914 SAC3D1A6NKF1 404 aa22.81■■□□□ 1.24
SMAD4-213ENST00000591914 SLC22A31A6NKX4 558 aa22.81■■□□□ 1.24
SMAD4-213ENST00000591914 WNT2P09544 360 aa22.81■■□□□ 1.24
SMAD4-213ENST00000591914 POLR2IP36954 125 aaKnown RBP22.81■■□□□ 1.24
SMAD4-213ENST00000591914 ROM1Q03395 351 aa22.81■■□□□ 1.24
SMAD4-213ENST00000591914 MZT1Q08AG7 82 aa22.81■■□□□ 1.24
SMAD4-213ENST00000591914 OR8B8Q15620 311 aa22.81■■□□□ 1.24
SMAD4-213ENST00000591914 ZFP1Q6P2D0 407 aa22.81■■□□□ 1.24
SMAD4-213ENST00000591914 TEX29Q8N6K0 151 aa22.81■■□□□ 1.24
SMAD4-213ENST00000591914 ASB17Q8WXJ9 295 aa22.81■■□□□ 1.24
SMAD4-213ENST00000591914 TMEM158Q8WZ71 300 aa22.81■■□□□ 1.24
SMAD4-213ENST00000591914 IL4I1Q96RQ9 567 aa22.81■■□□□ 1.24
SMAD4-213ENST00000591914 PKP2Q99959 881 aa22.81■■□□□ 1.24
SMAD4-213ENST00000591914 RBM4BQ9BQ04 359 aaKnown RBP22.81■■□□□ 1.24
SMAD4-213ENST00000591914 METTL17Q9H7H0 456 aaPredicted RBP22.81■■□□□ 1.24
SMAD4-213ENST00000591914 C14orf119Q9NWQ9 140 aa22.81■■□□□ 1.24
SMAD4-213ENST00000591914 COPS3Q9UNS2 423 aa22.81■■□□□ 1.24
SMAD4-213ENST00000591914 LRCH1Q9Y2L9 728 aa22.81■■□□□ 1.24
SMAD4-213ENST00000591914 PRR32B1ATL7 298 aa22.8■■□□□ 1.24
SMAD4-213ENST00000591914 EBAG9O00559 213 aa22.8■■□□□ 1.24
SMAD4-213ENST00000591914 ESCO2Q56NI9 601 aa22.8■■□□□ 1.24
SMAD4-213ENST00000591914 RFLNBQ8N5W9 214 aa22.8■■□□□ 1.24
SMAD4-213ENST00000591914 CSNK2A3Q8NEV1 391 aa22.8■■□□□ 1.24
SMAD4-213ENST00000591914 OR8B12Q8NGG6 310 aa22.8■■□□□ 1.24
SMAD4-213ENST00000591914 H2AFY2Q9P0M6 372 aaPredicted RBP22.8■■□□□ 1.24
SMAD4-213ENST00000591914 RNF7Q9UBF6 113 aa22.8■■□□□ 1.24
SMAD4-213ENST00000591914 MIOXQ9UGB7 285 aa22.8■■□□□ 1.24
SMAD4-213ENST00000591914 METRNQ9UJH8 293 aa22.8■■□□□ 1.24
SMAD4-213ENST00000591914 ZNF391Q9UJN7 358 aa22.8■■□□□ 1.24
SMAD4-213ENST00000591914 LOC105371242A0A075B767 164 aa22.79■■□□□ 1.24
SMAD4-213ENST00000591914 RNF212BA8MTL3 300 aa22.79■■□□□ 1.24
SMAD4-213ENST00000591914 RPS2P15880 293 aaKnown RBP22.79■■□□□ 1.24
SMAD4-213ENST00000591914 DCTDP32321 178 aa22.79■■□□□ 1.24
SMAD4-213ENST00000591914 GID4Q8IVV7 300 aa22.79■■□□□ 1.24
SMAD4-213ENST00000591914 ZNF679Q8IYX0 411 aa22.79■■□□□ 1.24
SMAD4-213ENST00000591914 LYZL4Q96KX0 146 aa22.79■■□□□ 1.24
SMAD4-213ENST00000591914 OR8B4Q96RC9 309 aa22.79■■□□□ 1.24
SMAD4-213ENST00000591914 MROQ9BYG7 248 aa22.79■■□□□ 1.24
SMAD4-213ENST00000591914 ADGRL4Q9HBW9 690 aa22.79■■□□□ 1.24
SMAD4-213ENST00000591914 FAM206AQ9NX38 181 aa22.79■■□□□ 1.24
SMAD4-213ENST00000591914 HAO2Q9NYQ3 351 aa22.79■■□□□ 1.24
SMAD4-213ENST00000591914 OPN4Q9UHM6 478 aa22.79■■□□□ 1.24
SMAD4-213ENST00000591914 ACOD1A6NK06 481 aa22.78■■□□□ 1.24
SMAD4-213ENST00000591914 TRAPPC2LH3BP13 241 aa22.78■■□□□ 1.24
SMAD4-213ENST00000591914 PSMD9O00233 223 aa22.78■■□□□ 1.24
SMAD4-213ENST00000591914 ZNF254O75437 659 aa22.78■■□□□ 1.24
SMAD4-213ENST00000591914 SNCBQ16143 134 aa22.78■■□□□ 1.24
SMAD4-213ENST00000591914 C1QL2Q7Z5L3 287 aa22.78■■□□□ 1.24
SMAD4-213ENST00000591914 OR8S1Q8NH09 359 aa22.78■■□□□ 1.24
SMAD4-213ENST00000591914 MNTQ99583 582 aa22.78■■□□□ 1.24
SMAD4-213ENST00000591914 RIBC2Q9H4K1 309 aa22.78■■□□□ 1.24
SMAD4-213ENST00000591914 C7orf69Q9H7B7 122 aa22.78■■□□□ 1.24
SMAD4-213ENST00000591914 MMP26Q9NRE1 261 aa22.78■■□□□ 1.24
SMAD4-213ENST00000591914 C1orf123Q9NWV4 160 aa22.78■■□□□ 1.24
SMAD4-213ENST00000591914 RHBDD3Q9Y3P4 386 aa22.78■■□□□ 1.24
SMAD4-213ENST00000591914 ALPLP05186 524 aa22.77■■□□□ 1.24
SMAD4-213ENST00000591914 GRPP07492 148 aa22.77■■□□□ 1.24
SMAD4-213ENST00000591914 ACKR3P25106 362 aa22.77■■□□□ 1.24
SMAD4-213ENST00000591914 DCDC5Q6ZRR9 648 aa22.77■■□□□ 1.24
SMAD4-213ENST00000591914 WDR86Q86TI4 376 aa22.77■■□□□ 1.24
SMAD4-213ENST00000591914 FTMTQ8N4E7 242 aa22.77■■□□□ 1.24
SMAD4-213ENST00000591914 SPATA3Q8NHX4 192 aa22.77■■□□□ 1.24
SMAD4-213ENST00000591914 NEIL1Q96FI4 390 aaPredicted RBP22.77■■□□□ 1.24
SMAD4-213ENST00000591914 PAPOLGQ9BWT3 736 aaKnown RBP22.77■■□□□ 1.24
SMAD4-213ENST00000591914 SSBP3Q9BWW4 388 aaPredicted RBP22.77■■□□□ 1.24
SMAD4-213ENST00000591914 PPP1R3EQ9H7J1 279 aa22.77■■□□□ 1.24
SMAD4-213ENST00000591914 A0A0U1RQV5 110 aa22.76■■□□□ 1.23
SMAD4-213ENST00000591914 TMEM269A0A1B0GVZ9 245 aa22.76■■□□□ 1.23
SMAD4-213ENST00000591914 ZNF12P17014 697 aa22.76■■□□□ 1.23
SMAD4-213ENST00000591914 GNALP38405 381 aa22.76■■□□□ 1.23
SMAD4-213ENST00000591914 HOXA4Q00056 320 aaPredicted RBP22.76■■□□□ 1.23
SMAD4-213ENST00000591914 SCGB2A2Q13296 93 aa22.76■■□□□ 1.23
SMAD4-213ENST00000591914 SLC35F2Q8IXU6 374 aa22.76■■□□□ 1.23
SMAD4-213ENST00000591914 C19orf18Q8NEA5 215 aa22.76■■□□□ 1.23
SMAD4-213ENST00000591914 DEFB108BQ8NET1 73 aa22.76■■□□□ 1.23
SMAD4-213ENST00000591914 TTTY10Q9BZA0 68 aa22.76■■□□□ 1.23
SMAD4-213ENST00000591914 CLN6Q9NWW5 311 aa22.76■■□□□ 1.23
SMAD4-213ENST00000591914 USE1Q9NZ43 259 aa22.76■■□□□ 1.23
SMAD4-213ENST00000591914 A6NLC8 198 aa22.75■■□□□ 1.23
SMAD4-213ENST00000591914 TCF21O43680 179 aa22.75■■□□□ 1.23
SMAD4-213ENST00000591914 CXCR4P61073 352 aa22.75■■□□□ 1.23
SMAD4-213ENST00000591914 SRSF2Q01130 221 aaKnown RBP22.75■■□□□ 1.23
SMAD4-213ENST00000591914 KRTAP24-1Q3LI83 254 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms