RNA–Protein interactions for RNA: ENST00000586477.1

ATG4D-205, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-205ENST00000586477 SPSB4Q96A44 273 aa13.81□□□□□ -0.2
ATG4D-205ENST00000586477 REEP6Q96HR9 211 aa13.81□□□□□ -0.2
ATG4D-205ENST00000586477 MGLLQ99685 303 aa13.81□□□□□ -0.2
ATG4D-205ENST00000586477 DHRS9Q9BPW9 319 aa13.81□□□□□ -0.2
ATG4D-205ENST00000586477 MRPS26Q9BYN8 205 aaKnown RBP13.81□□□□□ -0.2
ATG4D-205ENST00000586477 OR51B6Q9H340 312 aa13.81□□□□□ -0.2
ATG4D-205ENST00000586477 G6PC2Q9NQR9 355 aa13.81□□□□□ -0.2
ATG4D-205ENST00000586477 LOC390937A0A1W2PQ73 354 aa13.8□□□□□ -0.2
ATG4D-205ENST00000586477 DHRS7CA6NNS2 312 aa13.8□□□□□ -0.2
ATG4D-205ENST00000586477 LY6G6DO95868 133 aa13.8□□□□□ -0.2
ATG4D-205ENST00000586477 PNPP00491 289 aa13.8□□□□□ -0.2
ATG4D-205ENST00000586477 NGFP01138 241 aa13.8□□□□□ -0.2
ATG4D-205ENST00000586477 TTRP02766 147 aa13.8□□□□□ -0.2
ATG4D-205ENST00000586477 HEXAP06865 529 aa13.8□□□□□ -0.2
ATG4D-205ENST00000586477 HSMCR30P0CW71 290 aa13.8□□□□□ -0.2
ATG4D-205ENST00000586477 BMP4P12644 408 aa13.8□□□□□ -0.2
ATG4D-205ENST00000586477 ZNF250P15622 560 aa13.8□□□□□ -0.2
ATG4D-205ENST00000586477 PSMA1P25786 263 aaKnown RBP13.8□□□□□ -0.2
ATG4D-205ENST00000586477 APOBEC3AP31941 199 aaPredicted RBP13.8□□□□□ -0.2
ATG4D-205ENST00000586477 LIPAP38571 399 aa13.8□□□□□ -0.2
ATG4D-205ENST00000586477 PSMB10P40306 273 aa13.8□□□□□ -0.2
ATG4D-205ENST00000586477 EVX1P49640 407 aa13.8□□□□□ -0.2
ATG4D-205ENST00000586477 KLF3P57682 345 aaPredicted RBP13.8□□□□□ -0.2
ATG4D-205ENST00000586477 TRAM1Q15629 374 aa13.8□□□□□ -0.2
ATG4D-205ENST00000586477 SNAI3Q3KNW1 292 aa13.8□□□□□ -0.2
ATG4D-205ENST00000586477 ZMAT1Q5H9K5 638 aa13.8□□□□□ -0.2
ATG4D-205ENST00000586477 WDR38Q5JTN6 314 aa13.8□□□□□ -0.2
ATG4D-205ENST00000586477 DNM1P46Q6ZS02 220 aa13.8□□□□□ -0.2
ATG4D-205ENST00000586477 DOK3Q7L591 496 aa13.8□□□□□ -0.2
ATG4D-205ENST00000586477 NAA40Q86UY6 237 aa13.8□□□□□ -0.2
ATG4D-205ENST00000586477 SYNPRQ8TBG9 265 aa13.8□□□□□ -0.2
ATG4D-205ENST00000586477 SLC25A40Q8TBP6 338 aa13.8□□□□□ -0.2
ATG4D-205ENST00000586477 MARS2Q96GW9 593 aaKnown RBP13.8□□□□□ -0.2
ATG4D-205ENST00000586477 FRRS1LQ9P0K9 344 aa13.8□□□□□ -0.2
ATG4D-205ENST00000586477 HHLA2Q9UM44 414 aa13.8□□□□□ -0.2
ATG4D-205ENST00000586477 STARD10Q9Y365 291 aa13.8□□□□□ -0.2
ATG4D-205ENST00000586477 NOP16Q9Y3C1 178 aaKnown RBP13.8□□□□□ -0.2
ATG4D-205ENST00000586477 TRIM64CA6NLI5 447 aa13.79□□□□□ -0.2
ATG4D-205ENST00000586477 SMAD7O15105 426 aaKnown RBP13.79□□□□□ -0.2
ATG4D-205ENST00000586477 SYT7O43581 403 aa13.79□□□□□ -0.2
ATG4D-205ENST00000586477 PLPP2O43688 288 aa13.79□□□□□ -0.2
ATG4D-205ENST00000586477 CLPTM1O96005 669 aa13.79□□□□□ -0.2
ATG4D-205ENST00000586477 CELP19835 753 aa13.79□□□□□ -0.2
ATG4D-205ENST00000586477 PCMT1P22061 227 aa13.79□□□□□ -0.2
ATG4D-205ENST00000586477 ACHEP22303 614 aa13.79□□□□□ -0.2
ATG4D-205ENST00000586477 TTKP33981 857 aa13.79□□□□□ -0.2
ATG4D-205ENST00000586477 MAP2K4P45985 399 aa13.79□□□□□ -0.2
ATG4D-205ENST00000586477 TNK1Q13470 666 aa13.79□□□□□ -0.2
ATG4D-205ENST00000586477 GFOD2Q3B7J2 385 aa13.79□□□□□ -0.2
ATG4D-205ENST00000586477 YIF1BQ5BJH7 314 aa13.79□□□□□ -0.2
ATG4D-205ENST00000586477 GLYATL3Q5SZD4 288 aa13.79□□□□□ -0.2
ATG4D-205ENST00000586477 ZBTB37Q5TC79 503 aa13.79□□□□□ -0.2
ATG4D-205ENST00000586477 DMKNQ6E0U4 476 aaPredicted RBP13.79□□□□□ -0.2
ATG4D-205ENST00000586477 VHLLQ6RSH7 139 aa13.79□□□□□ -0.2
ATG4D-205ENST00000586477 KCTD8Q6ZWB6 473 aa13.79□□□□□ -0.2
ATG4D-205ENST00000586477 FBXL14Q8N1E6 418 aa13.79□□□□□ -0.2
ATG4D-205ENST00000586477 PRSS35Q8N3Z0 413 aa13.79□□□□□ -0.2
ATG4D-205ENST00000586477 MS4A15Q8N5U1 240 aa13.79□□□□□ -0.2
ATG4D-205ENST00000586477 CSNK2A3Q8NEV1 391 aa13.79□□□□□ -0.2
ATG4D-205ENST00000586477 RPS4Y2Q8TD47 263 aa13.79□□□□□ -0.2
ATG4D-205ENST00000586477 KLF14Q8TD94 323 aaPredicted RBP13.79□□□□□ -0.2
ATG4D-205ENST00000586477 MRPL24Q96A35 216 aaKnown RBP13.79□□□□□ -0.2
ATG4D-205ENST00000586477 C10orf35Q96D05 121 aa13.79□□□□□ -0.2
ATG4D-205ENST00000586477 OR5M11Q96RB7 305 aa13.79□□□□□ -0.2
ATG4D-205ENST00000586477 OR2J1Q9GZK6 312 aa13.79□□□□□ -0.2
ATG4D-205ENST00000586477 CYSLTR2Q9NS75 346 aa13.79□□□□□ -0.2
ATG4D-205ENST00000586477 PTTG3PQ9NZH4 202 aa13.79□□□□□ -0.2
ATG4D-205ENST00000586477 SCOCQ9UIL1 159 aa13.79□□□□□ -0.2
ATG4D-205ENST00000586477 SLC22A13Q9Y226 551 aa13.79□□□□□ -0.2
ATG4D-205ENST00000586477 HIVEP2P31629 2446 aa13.78□□□□□ -0.2
ATG4D-205ENST00000586477 GGT3PA6NGU5 568 aa13.78□□□□□ -0.2
ATG4D-205ENST00000586477 OR4C45A6NMZ5 311 aa13.78□□□□□ -0.2
ATG4D-205ENST00000586477 DHRS3O75911 302 aa13.78□□□□□ -0.2
ATG4D-205ENST00000586477 SERPINA3P01011 423 aa13.78□□□□□ -0.2
ATG4D-205ENST00000586477 CCL1P22362 96 aa13.78□□□□□ -0.2
ATG4D-205ENST00000586477 PSMB9P28065 219 aa13.78□□□□□ -0.2
ATG4D-205ENST00000586477 THBS4P35443 961 aa13.78□□□□□ -0.2
ATG4D-205ENST00000586477 SERPINF1P36955 418 aa13.78□□□□□ -0.2
ATG4D-205ENST00000586477 MAP2K3P46734 347 aa13.78□□□□□ -0.2
ATG4D-205ENST00000586477 FABP6P51161 128 aa13.78□□□□□ -0.2
ATG4D-205ENST00000586477 NANOS3P60323 173 aaKnown RBP13.78□□□□□ -0.2
ATG4D-205ENST00000586477 KRTAP1-1Q07627 177 aa13.78□□□□□ -0.2
ATG4D-205ENST00000586477 TPBGQ13641 420 aa13.78□□□□□ -0.2
ATG4D-205ENST00000586477 GK2Q14410 553 aaPredicted RBP13.78□□□□□ -0.2
ATG4D-205ENST00000586477 EFNB3Q15768 340 aa13.78□□□□□ -0.2
ATG4D-205ENST00000586477 OR51E1Q8TCB6 317 aa13.78□□□□□ -0.2
ATG4D-205ENST00000586477 GPR148Q8TDV2 347 aa13.78□□□□□ -0.2
ATG4D-205ENST00000586477 SGK3Q96BR1 496 aa13.78□□□□□ -0.2
ATG4D-205ENST00000586477 HAVCR1Q96D42 359 aa13.78□□□□□ -0.2
ATG4D-205ENST00000586477 REPIN1Q9BWE0 567 aaKnown RBP13.78□□□□□ -0.2
ATG4D-205ENST00000586477 SLC22A4Q9H015 551 aa13.78□□□□□ -0.2
ATG4D-205ENST00000586477 PLK3Q9H4B4 646 aa13.78□□□□□ -0.2
ATG4D-205ENST00000586477 PLEKHA1Q9HB21 404 aa13.78□□□□□ -0.2
ATG4D-205ENST00000586477 ABCB9Q9NP78 766 aa13.78□□□□□ -0.2
ATG4D-205ENST00000586477 GPR84Q9NQS5 396 aa13.78□□□□□ -0.2
ATG4D-205ENST00000586477 ZNF281Q9Y2X9 895 aa13.78□□□□□ -0.2
ATG4D-205ENST00000586477 JMJD1CQ15652 2540 aa13.78□□□□□ -0.2
ATG4D-205ENST00000586477 IGLV3-9A0A075B6K5 115 aa13.77□□□□□ -0.21
ATG4D-205ENST00000586477 A0A1W2PPW3 197 aa13.77□□□□□ -0.21
ATG4D-205ENST00000586477 PLSCR5A0PG75 271 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms